RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 MXD3Q9BW11 206 aa31.23■■■□□ 2.59
LIME1-206ENST00000487026 GGA3Q9NZ52 723 aa31.23■■■□□ 2.59
LIME1-206ENST00000487026 LEMD3Q9Y2U8 911 aa31.23■■■□□ 2.59
LIME1-206ENST00000487026 FOXO4P98177 505 aa31.22■■■□□ 2.59
LIME1-206ENST00000487026 SCARF1Q14162 830 aa31.22■■■□□ 2.59
LIME1-206ENST00000487026 FBXW7Q969H0 707 aa31.22■■■□□ 2.59
LIME1-206ENST00000487026 USP17L8P0C7I0 530 aa31.21■■■□□ 2.59
LIME1-206ENST00000487026 KLRK1P26718 216 aa31.21■■■□□ 2.59
LIME1-206ENST00000487026 HHIPL1Q96JK4 782 aa31.21■■■□□ 2.59
LIME1-206ENST00000487026 ANKRD2Q9GZV1 360 aa31.21■■■□□ 2.59
LIME1-206ENST00000487026 CHMP3Q9Y3E7 222 aa31.21■■■□□ 2.59
LIME1-206ENST00000487026 ZNF804BA4D1E1 1349 aa31.21■■■□□ 2.59
LIME1-206ENST00000487026 ANKRD18BA2A2Z9 1011 aa31.2■■■□□ 2.59
LIME1-206ENST00000487026 MAP2K2P36507 400 aa31.2■■■□□ 2.59
LIME1-206ENST00000487026 HUNKP57058 714 aa31.2■■■□□ 2.59
LIME1-206ENST00000487026 MYOZ2Q9NPC6 264 aa31.2■■■□□ 2.59
LIME1-206ENST00000487026 CHRNDQ07001 517 aa31.19■■■□□ 2.58
LIME1-206ENST00000487026 ANGEL2Q5VTE6 544 aaKnown RBP31.19■■■□□ 2.58
LIME1-206ENST00000487026 BEGAINQ9BUH8 593 aa31.19■■■□□ 2.58
LIME1-206ENST00000487026 ZNF521Q96K83 1311 aa31.19■■■□□ 2.58
LIME1-206ENST00000487026 PSME4Q14997 1843 aa31.19■■■□□ 2.58
LIME1-206ENST00000487026 ZNF609O15014 1411 aa31.18■■■□□ 2.58
LIME1-206ENST00000487026 THSD7BQ9C0I4 1608 aa31.18■■■□□ 2.58
LIME1-206ENST00000487026 EPHA10Q5JZY3 1008 aa31.18■■■□□ 2.58
LIME1-206ENST00000487026 DACT2Q5SW24 774 aa31.18■■■□□ 2.58
LIME1-206ENST00000487026 SLC4A10Q6U841 1118 aa31.18■■■□□ 2.58
LIME1-206ENST00000487026 SULF1Q8IWU6 871 aa31.18■■■□□ 2.58
LIME1-206ENST00000487026 COA1Q9GZY4 146 aa31.18■■■□□ 2.58
LIME1-206ENST00000487026 GBA2Q9HCG7 927 aaPredicted RBP31.18■■■□□ 2.58
LIME1-206ENST00000487026 SNAP23O00161 211 aa31.17■■■□□ 2.58
LIME1-206ENST00000487026 IFIT5Q13325 482 aaKnown RBP31.17■■■□□ 2.58
LIME1-206ENST00000487026 HELBQ8NG08 1087 aaPredicted RBP31.17■■■□□ 2.58
LIME1-206ENST00000487026 TAF5LO75529 589 aa31.16■■■□□ 2.58
LIME1-206ENST00000487026 KCNJ4P48050 445 aa31.16■■■□□ 2.58
LIME1-206ENST00000487026 LMBR1LQ6UX01 489 aa31.16■■■□□ 2.58
LIME1-206ENST00000487026 C2orf69Q8N8R5 385 aa31.16■■■□□ 2.58
LIME1-206ENST00000487026 GRM8O00222 908 aa31.15■■■□□ 2.58
LIME1-206ENST00000487026 ZIC5Q96T25 663 aa31.15■■■□□ 2.58
LIME1-206ENST00000487026 C9orf78Q9NZ63 289 aaPredicted RBP31.15■■■□□ 2.58
LIME1-206ENST00000487026 TSKSQ9UJT2 592 aa31.15■■■□□ 2.58
LIME1-206ENST00000487026 SCAF8Q9UPN6 1271 aaKnown RBP31.15■■■□□ 2.58
LIME1-206ENST00000487026 STRIP1Q5VSL9 837 aa31.14■■■□□ 2.58
LIME1-206ENST00000487026 CDCA5Q96FF9 252 aa31.14■■■□□ 2.58
LIME1-206ENST00000487026 ZNF594Q96JF6 807 aaPredicted RBP31.14■■■□□ 2.58
LIME1-206ENST00000487026 NBPF9Q3BBW0 867 aa31.12■■■□□ 2.57
LIME1-206ENST00000487026 TTLL5Q6EMB2 1281 aa31.12■■■□□ 2.57
LIME1-206ENST00000487026 SRCIN1Q9C0H9 1055 aa31.12■■■□□ 2.57
LIME1-206ENST00000487026 ALDH1L1O75891 902 aa31.11■■■□□ 2.57
LIME1-206ENST00000487026 RGMBQ6NW40 437 aa31.11■■■□□ 2.57
LIME1-206ENST00000487026 GTF2IP78347 998 aa31.1■■■□□ 2.57
LIME1-206ENST00000487026 OGFOD1Q8N543 542 aa31.1■■■□□ 2.57
LIME1-206ENST00000487026 CCDC57Q2TAC2 916 aa31.09■■■□□ 2.57
LIME1-206ENST00000487026 MRPL50Q8N5N7 158 aaKnown RBP31.09■■■□□ 2.57
LIME1-206ENST00000487026 PLIN1O60240 522 aa31.08■■■□□ 2.57
LIME1-206ENST00000487026 BRPF1P55201 1214 aaPredicted RBP31.08■■■□□ 2.57
LIME1-206ENST00000487026 NOGQ13253 232 aa31.08■■■□□ 2.57
LIME1-206ENST00000487026 CD209Q9NNX6 404 aa31.08■■■□□ 2.57
LIME1-206ENST00000487026 ZNF646O15015 1829 aaPredicted RBP31.08■■■□□ 2.57
LIME1-206ENST00000487026 MYO3BQ8WXR4 1341 aa31.07■■■□□ 2.56
LIME1-206ENST00000487026 IRS2Q9Y4H2 1338 aa31.07■■■□□ 2.56
LIME1-206ENST00000487026 FAM155AB1AL88 458 aaPredicted RBP31.07■■■□□ 2.56
LIME1-206ENST00000487026 ZNF157P51786 506 aaPredicted RBP31.07■■■□□ 2.56
LIME1-206ENST00000487026 TAF7LQ5H9L4 462 aa31.07■■■□□ 2.56
LIME1-206ENST00000487026 PRAMEF18Q5VWM3 479 aa31.07■■■□□ 2.56
LIME1-206ENST00000487026 LDHAL6AQ6ZMR3 332 aa31.07■■■□□ 2.56
LIME1-206ENST00000487026 KIAA0825Q8IV33 1275 aa31.07■■■□□ 2.56
LIME1-206ENST00000487026 SUCLG2Q96I99 432 aa31.06■■■□□ 2.56
LIME1-206ENST00000487026 PITPNM2Q9BZ72 1349 aa31.05■■■□□ 2.56
LIME1-206ENST00000487026 E9PSI1 815 aa31.05■■■□□ 2.56
LIME1-206ENST00000487026 WNT10BO00744 389 aa31.05■■■□□ 2.56
LIME1-206ENST00000487026 NBPF7P0C2Y1 421 aaPredicted RBP31.05■■■□□ 2.56
LIME1-206ENST00000487026 KAZALD1Q96I82 304 aa31.05■■■□□ 2.56
LIME1-206ENST00000487026 CNNM1Q9NRU3 951 aa31.05■■■□□ 2.56
LIME1-206ENST00000487026 SASH1O94885 1247 aa31.04■■■□□ 2.56
LIME1-206ENST00000487026 SLFN5Q08AF3 891 aa31.03■■■□□ 2.56
LIME1-206ENST00000487026 C15orf52Q6ZUT6 534 aaKnown RBP31.03■■■□□ 2.56
LIME1-206ENST00000487026 SSH1Q8WYL5 1049 aa31.03■■■□□ 2.56
LIME1-206ENST00000487026 CCDC102AQ96A19 550 aa31.03■■■□□ 2.56
LIME1-206ENST00000487026 KIF23Q02241 960 aaPredicted RBP31.02■■■□□ 2.56
LIME1-206ENST00000487026 MOB2Q70IA6 237 aa31.02■■■□□ 2.56
LIME1-206ENST00000487026 CDCA7LQ96GN5 454 aa31.02■■■□□ 2.56
LIME1-206ENST00000487026 CA12O43570 354 aa31.01■■■□□ 2.55
LIME1-206ENST00000487026 CERS5Q8N5B7 392 aa31.01■■■□□ 2.55
LIME1-206ENST00000487026 PUS3Q9BZE2 481 aaKnown RBP31.01■■■□□ 2.55
LIME1-206ENST00000487026 ZNF804AQ7Z570 1209 aa31■■■□□ 2.55
LIME1-206ENST00000487026 HDAC9Q9UKV0 1011 aa31■■■□□ 2.55
LIME1-206ENST00000487026 JAG2Q9Y219 1238 aa31■■■□□ 2.55
LIME1-206ENST00000487026 A0A1B0GUL6 1792 aa30.99■■■□□ 2.55
LIME1-206ENST00000487026 UTYO14607 1347 aa30.98■■■□□ 2.55
LIME1-206ENST00000487026 IL1R1P14778 569 aa30.98■■■□□ 2.55
LIME1-206ENST00000487026 BICC1Q9H694 974 aaKnown RBP30.98■■■□□ 2.55
LIME1-206ENST00000487026 F8W031 263 aaPredicted RBP30.97■■■□□ 2.55
LIME1-206ENST00000487026 UBE2Q2LH0YL09 131 aa30.97■■■□□ 2.55
LIME1-206ENST00000487026 SLC10A3P09131 477 aa30.97■■■□□ 2.55
LIME1-206ENST00000487026 MMP14P50281 582 aa30.97■■■□□ 2.55
LIME1-206ENST00000487026 PTPRCP08575 1304 aa30.97■■■□□ 2.55
LIME1-206ENST00000487026 FKBP1BP68106 108 aa30.96■■■□□ 2.55
LIME1-206ENST00000487026 ABHD8Q96I13 439 aa30.96■■■□□ 2.55
LIME1-206ENST00000487026 ZBED3Q96IU2 234 aaPredicted RBP30.96■■■□□ 2.55
LIME1-206ENST00000487026 PCDHAC2Q9Y5I4 1007 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms