RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 HDAC1Q13547 482 aaPredicted RBP6.87□□□□□ -1.31
SF1-217ENST00000486960 DHX8Q14562 1220 aaKnown RBP6.87□□□□□ -1.31
SF1-217ENST00000486960 ENOX2Q16206 610 aaKnown RBP6.87□□□□□ -1.31
SF1-217ENST00000486960 SLC27A3Q5K4L6 730 aa6.87□□□□□ -1.31
SF1-217ENST00000486960 L1TD1Q5T7N2 865 aaKnown RBP6.87□□□□□ -1.31
SF1-217ENST00000486960 ARMCX6Q7L4S7 300 aa6.87□□□□□ -1.31
SF1-217ENST00000486960 C1orf131Q8NDD1 294 aaKnown RBP6.87□□□□□ -1.31
SF1-217ENST00000486960 TSC1Q92574 1164 aa6.87□□□□□ -1.31
SF1-217ENST00000486960 ALG2Q9H553 416 aa6.87□□□□□ -1.31
SF1-217ENST00000486960 BMP2KQ9NSY1 1161 aaPredicted RBP6.87□□□□□ -1.31
SF1-217ENST00000486960 MAFBQ9Y5Q3 323 aaPredicted RBP6.87□□□□□ -1.31
SF1-217ENST00000486960 MRPL42Q9Y6G3 142 aaKnown RBP6.87□□□□□ -1.31
SF1-217ENST00000486960 NDUFB9Q9Y6M9 179 aa6.87□□□□□ -1.31
SF1-217ENST00000486960 GRXCR2A6NFK2 248 aa6.86□□□□□ -1.31
SF1-217ENST00000486960 ATMINO43313 823 aaPredicted RBP6.86□□□□□ -1.31
SF1-217ENST00000486960 AOC2O75106 756 aa6.86□□□□□ -1.31
SF1-217ENST00000486960 PDGFRBP09619 1106 aa6.86□□□□□ -1.31
SF1-217ENST00000486960 VDRP11473 427 aa6.86□□□□□ -1.31
SF1-217ENST00000486960 DPEP1P16444 411 aa6.86□□□□□ -1.31
SF1-217ENST00000486960 DNAJA1P31689 397 aaKnown RBP6.86□□□□□ -1.31
SF1-217ENST00000486960 MRPL58Q14197 206 aaKnown RBP6.86□□□□□ -1.31
SF1-217ENST00000486960 COL19A1Q14993 1142 aa6.86□□□□□ -1.31
SF1-217ENST00000486960 EAPPQ56P03 285 aaPredicted RBP6.86□□□□□ -1.31
SF1-217ENST00000486960 CCDC174Q6PII3 467 aa6.86□□□□□ -1.31
SF1-217ENST00000486960 STAG1Q8WVM7 1258 aa6.86□□□□□ -1.31
SF1-217ENST00000486960 FRMD6Q96NE9 622 aa6.86□□□□□ -1.31
SF1-217ENST00000486960 GMLQ99445 158 aa6.86□□□□□ -1.31
SF1-217ENST00000486960 FEZ2Q9UHY8 353 aaPredicted RBP6.86□□□□□ -1.31
SF1-217ENST00000486960 RBBP6Q7Z6E9 1792 aaKnown RBP6.86□□□□□ -1.31
SF1-217ENST00000486960 BAHCC1Q9P281 2608 aa6.86□□□□□ -1.31
SF1-217ENST00000486960 NSD2O96028 1365 aa6.85□□□□□ -1.31
SF1-217ENST00000486960 C4BP0C0L5 1744 aa6.85□□□□□ -1.31
SF1-217ENST00000486960 SEC24BO95487 1268 aa6.85□□□□□ -1.31
SF1-217ENST00000486960 ATN1P54259 1190 aaPredicted RBP6.85□□□□□ -1.31
SF1-217ENST00000486960 DIXDC1Q155Q3 683 aa6.85□□□□□ -1.31
SF1-217ENST00000486960 NFE2L2Q16236 605 aa6.85□□□□□ -1.31
SF1-217ENST00000486960 CYP4F22Q6NT55 531 aa6.85□□□□□ -1.31
SF1-217ENST00000486960 PPP1R18Q6NYC8 613 aa6.85□□□□□ -1.31
SF1-217ENST00000486960 PAF1Q8N7H5 531 aa6.85□□□□□ -1.31
SF1-217ENST00000486960 MRFAP1L1Q96HT8 127 aa6.85□□□□□ -1.31
SF1-217ENST00000486960 DCAF5Q96JK2 942 aa6.85□□□□□ -1.31
SF1-217ENST00000486960 CAPNS2Q96L46 248 aa6.85□□□□□ -1.31
SF1-217ENST00000486960 RSPH9Q9H1X1 276 aaPredicted RBP6.85□□□□□ -1.31
SF1-217ENST00000486960 TMX1Q9H3N1 280 aa6.85□□□□□ -1.31
SF1-217ENST00000486960 ZHX3Q9H4I2 956 aa6.85□□□□□ -1.31
SF1-217ENST00000486960 TYW1Q9NV66 732 aaKnown RBP6.85□□□□□ -1.31
SF1-217ENST00000486960 STK26Q9P289 416 aa6.85□□□□□ -1.31
SF1-217ENST00000486960 ANAPC4Q9UJX5 808 aa6.85□□□□□ -1.31
SF1-217ENST00000486960 TRIM35Q9UPQ4 493 aa6.85□□□□□ -1.31
SF1-217ENST00000486960 PRKAB1Q9Y478 270 aa6.85□□□□□ -1.31
SF1-217ENST00000486960 MYOM3Q5VTT5 1437 aa6.84□□□□□ -1.31
SF1-217ENST00000486960 GOLGA6CA6NDK9 693 aa6.84□□□□□ -1.31
SF1-217ENST00000486960 GOLGA6BA6NDN3 693 aa6.84□□□□□ -1.31
SF1-217ENST00000486960 LDHAP00338 332 aaKnown RBP6.84□□□□□ -1.31
SF1-217ENST00000486960 GOLGA6DP0CG33 693 aa6.84□□□□□ -1.31
SF1-217ENST00000486960 NBPF20Q3BBV1 942 aa6.84□□□□□ -1.31
SF1-217ENST00000486960 MAP9Q49MG5 647 aa6.84□□□□□ -1.31
SF1-217ENST00000486960 ODR4Q5SWX8 454 aa6.84□□□□□ -1.31
SF1-217ENST00000486960 ASTLQ6HA08 431 aaPredicted RBP6.84□□□□□ -1.31
SF1-217ENST00000486960 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.84□□□□□ -1.31
SF1-217ENST00000486960 METTL16Q86W50 562 aaKnown RBP6.84□□□□□ -1.31
SF1-217ENST00000486960 ZSCAN29Q8IWY8 852 aaPredicted RBP6.84□□□□□ -1.31
SF1-217ENST00000486960 DRC7Q8IY82 874 aa6.84□□□□□ -1.31
SF1-217ENST00000486960 MSL3Q8N5Y2 521 aaKnown RBP6.84□□□□□ -1.31
SF1-217ENST00000486960 TMEM87AQ8NBN3 555 aa6.84□□□□□ -1.31
SF1-217ENST00000486960 STK32AQ8WU08 396 aa6.84□□□□□ -1.31
SF1-217ENST00000486960 RELTQ969Z4 430 aa6.84□□□□□ -1.31
SF1-217ENST00000486960 OTUD5Q96G74 571 aa6.84□□□□□ -1.31
SF1-217ENST00000486960 L3MBTL3Q96JM7 780 aaPredicted RBP6.84□□□□□ -1.31
SF1-217ENST00000486960 UCN2Q96RP3 112 aa6.84□□□□□ -1.31
SF1-217ENST00000486960 GOLGA6AQ9NYA3 693 aa6.84□□□□□ -1.31
SF1-217ENST00000486960 UNC79Q9P2D8 2635 aa6.84□□□□□ -1.31
SF1-217ENST00000486960 ANKRD30BQ9BXX2 1392 aa6.83□□□□□ -1.32
SF1-217ENST00000486960 SCN4AP35499 1836 aa6.83□□□□□ -1.32
SF1-217ENST00000486960 ERBB4Q15303 1308 aa6.83□□□□□ -1.32
SF1-217ENST00000486960 VIL1P09327 827 aaKnown RBP6.83□□□□□ -1.32
SF1-217ENST00000486960 XRCC5P13010 732 aaKnown RBP6.83□□□□□ -1.32
SF1-217ENST00000486960 MAPK1P28482 360 aa6.83□□□□□ -1.32
SF1-217ENST00000486960 VAC14Q08AM6 782 aa6.83□□□□□ -1.32
SF1-217ENST00000486960 MAPRE1Q15691 268 aaKnown RBP6.83□□□□□ -1.32
SF1-217ENST00000486960 CEP120Q8N960 986 aa6.83□□□□□ -1.32
SF1-217ENST00000486960 SNRNP27Q8WVK2 155 aaKnown RBP6.83□□□□□ -1.32
SF1-217ENST00000486960 PPM1EQ8WY54 764 aa6.83□□□□□ -1.32
SF1-217ENST00000486960 SLC39A7Q92504 469 aa6.83□□□□□ -1.32
SF1-217ENST00000486960 ZNF512BQ96KM6 892 aaPredicted RBP6.83□□□□□ -1.32
SF1-217ENST00000486960 ASB16Q96NS5 453 aa6.83□□□□□ -1.32
SF1-217ENST00000486960 GPR101Q96P66 508 aaPredicted RBP6.83□□□□□ -1.32
SF1-217ENST00000486960 CEP89Q96ST8 783 aa6.83□□□□□ -1.32
SF1-217ENST00000486960 CABP2Q9NPB3 220 aa6.83□□□□□ -1.32
SF1-217ENST00000486960 ZMIZ1Q9ULJ6 1067 aa6.83□□□□□ -1.32
SF1-217ENST00000486960 NOVA2Q9UNW9 492 aaKnown RBP6.83□□□□□ -1.32
SF1-217ENST00000486960 C4AP0C0L4 1744 aa6.83□□□□□ -1.32
SF1-217ENST00000486960 DAPK1P53355 1430 aa6.83□□□□□ -1.32
SF1-217ENST00000486960 ANKARQ7Z5J8 1434 aa6.83□□□□□ -1.32
SF1-217ENST00000486960 GPRASP1Q5JY77 1395 aa6.82□□□□□ -1.32
SF1-217ENST00000486960 BICDL2A1A5D9 508 aa6.82□□□□□ -1.32
SF1-217ENST00000486960 ENPP3O14638 875 aa6.82□□□□□ -1.32
SF1-217ENST00000486960 TCERG1O14776 1098 aaKnown RBP6.82□□□□□ -1.32
SF1-217ENST00000486960 AP1G2O75843 785 aa6.82□□□□□ -1.32
SF1-217ENST00000486960 FGAP02671 866 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms