RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 G3V3G9 751 aa11.12□□□□□ -0.63
APTX-228ENST00000486724 FARP2O94887 1054 aaPredicted RBP11.12□□□□□ -0.63
APTX-228ENST00000486724 HOXD11P31277 338 aaPredicted RBP11.12□□□□□ -0.63
APTX-228ENST00000486724 DDX10Q13206 875 aaKnown RBP11.12□□□□□ -0.63
APTX-228ENST00000486724 MTFR1Q15390 333 aa11.12□□□□□ -0.63
APTX-228ENST00000486724 DCAF8Q5TAQ9 597 aa11.12□□□□□ -0.63
APTX-228ENST00000486724 GIGYF2Q6Y7W6 1299 aaKnown RBP11.12□□□□□ -0.63
APTX-228ENST00000486724 GDF15Q99988 308 aa11.12□□□□□ -0.63
APTX-228ENST00000486724 ZC3H12CQ9C0D7 883 aaKnown RBP11.12□□□□□ -0.63
APTX-228ENST00000486724 RAPGEFL1Q9UHV5 662 aa11.12□□□□□ -0.63
APTX-228ENST00000486724 DIAPH1O60610 1272 aaKnown RBP11.11□□□□□ -0.63
APTX-228ENST00000486724 GJB1P08034 283 aa11.11□□□□□ -0.63
APTX-228ENST00000486724 PRMT2P55345 433 aa11.11□□□□□ -0.63
APTX-228ENST00000486724 GPSM2P81274 684 aa11.11□□□□□ -0.63
APTX-228ENST00000486724 TBC1D16Q8TBP0 767 aa11.11□□□□□ -0.63
APTX-228ENST00000486724 SYMPKQ92797 1274 aaKnown RBP11.11□□□□□ -0.63
APTX-228ENST00000486724 GMLQ99445 158 aa11.11□□□□□ -0.63
APTX-228ENST00000486724 POLR3GLQ9BT43 218 aa11.11□□□□□ -0.63
APTX-228ENST00000486724 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.11□□□□□ -0.63
APTX-228ENST00000486724 COL1A1P02452 1464 aaPredicted RBP11.11□□□□□ -0.63
APTX-228ENST00000486724 TESPA1A2RU30 521 aaPredicted RBP11.1□□□□□ -0.63
APTX-228ENST00000486724 UNCXA6NJT0 531 aa11.1□□□□□ -0.63
APTX-228ENST00000486724 GNRH1P01148 92 aa11.1□□□□□ -0.63
APTX-228ENST00000486724 HCLS1P14317 486 aaPredicted RBP11.1□□□□□ -0.63
APTX-228ENST00000486724 BCAMP50895 628 aa11.1□□□□□ -0.63
APTX-228ENST00000486724 KIF22Q14807 665 aa11.1□□□□□ -0.63
APTX-228ENST00000486724 MAP3K11Q16584 847 aa11.1□□□□□ -0.63
APTX-228ENST00000486724 APOBEC3FQ8IUX4 373 aaKnown RBP11.1□□□□□ -0.63
APTX-228ENST00000486724 CLMNQ96JQ2 1002 aa11.1□□□□□ -0.63
APTX-228ENST00000486724 PTPN18Q99952 460 aa11.1□□□□□ -0.63
APTX-228ENST00000486724 ZSWIM8A7E2V4 1837 aa11.09□□□□□ -0.63
APTX-228ENST00000486724 SSC5DA1L4H1 1573 aa11.09□□□□□ -0.63
APTX-228ENST00000486724 WNT10BO00744 389 aa11.09□□□□□ -0.63
APTX-228ENST00000486724 MYL6BP14649 208 aa11.09□□□□□ -0.63
APTX-228ENST00000486724 TDHQ8IZJ6 230 aa11.09□□□□□ -0.63
APTX-228ENST00000486724 ZFYVE28Q9HCC9 887 aa11.09□□□□□ -0.63
APTX-228ENST00000486724 TSHZ2Q9NRE2 1034 aa11.09□□□□□ -0.63
APTX-228ENST00000486724 FZD1Q9UP38 647 aa11.09□□□□□ -0.63
APTX-228ENST00000486724 RRP7AQ9Y3A4 280 aaKnown RBP11.09□□□□□ -0.63
APTX-228ENST00000486724 PPP1R12BO60237 982 aaPredicted RBP11.08□□□□□ -0.64
APTX-228ENST00000486724 CCL5P13501 91 aa11.08□□□□□ -0.64
APTX-228ENST00000486724 TAF1CQ15572 869 aaPredicted RBP11.08□□□□□ -0.64
APTX-228ENST00000486724 OGFOD1Q8N543 542 aa11.08□□□□□ -0.64
APTX-228ENST00000486724 GUCD1Q96NT3 240 aa11.08□□□□□ -0.64
APTX-228ENST00000486724 PANK3Q9H999 370 aa11.08□□□□□ -0.64
APTX-228ENST00000486724 IRS2Q9Y4H2 1338 aa11.08□□□□□ -0.64
APTX-228ENST00000486724 USP17L3A6NCW0 530 aa11.07□□□□□ -0.64
APTX-228ENST00000486724 USP17L4A6NCW7 530 aa11.07□□□□□ -0.64
APTX-228ENST00000486724 GJA5P36382 358 aa11.07□□□□□ -0.64
APTX-228ENST00000486724 LACTBP83111 547 aaPredicted RBP11.07□□□□□ -0.64
APTX-228ENST00000486724 USP17L1Q7RTZ2 530 aa11.07□□□□□ -0.64
APTX-228ENST00000486724 U2AF1L4Q8WU68 220 aaKnown RBP11.07□□□□□ -0.64
APTX-228ENST00000486724 CELF1Q92879 486 aaKnown RBP11.07□□□□□ -0.64
APTX-228ENST00000486724 ARHGAP39Q9C0H5 1083 aa11.07□□□□□ -0.64
APTX-228ENST00000486724 RNF208Q9H0X6 261 aa11.07□□□□□ -0.64
APTX-228ENST00000486724 SH3TC1Q8TE82 1336 aa11.07□□□□□ -0.64
APTX-228ENST00000486724 WDHD1O75717 1129 aaPredicted RBP11.06□□□□□ -0.64
APTX-228ENST00000486724 UFL1O94874 794 aa11.06□□□□□ -0.64
APTX-228ENST00000486724 SASH1O94885 1247 aa11.06□□□□□ -0.64
APTX-228ENST00000486724 FAM109BQ6ICB4 259 aaPredicted RBP11.06□□□□□ -0.64
APTX-228ENST00000486724 CNKSR2Q8WXI2 1034 aa11.06□□□□□ -0.64
APTX-228ENST00000486724 SUPT16HQ9Y5B9 1047 aaKnown RBP11.06□□□□□ -0.64
APTX-228ENST00000486724 ALPK3Q96L96 1907 aa11.05□□□□□ -0.64
APTX-228ENST00000486724 TMEM265A0A087WTH1 108 aa11.05□□□□□ -0.64
APTX-228ENST00000486724 TNFRSF10AO00220 468 aa11.05□□□□□ -0.64
APTX-228ENST00000486724 GRK4P32298 578 aa11.05□□□□□ -0.64
APTX-228ENST00000486724 RTF1Q92541 710 aaKnown RBP11.05□□□□□ -0.64
APTX-228ENST00000486724 PODXL2Q9NZ53 605 aa11.05□□□□□ -0.64
APTX-228ENST00000486724 TRMT112Q9UI30 125 aaKnown RBP11.05□□□□□ -0.64
APTX-228ENST00000486724 COL4A1P02462 1669 aa11.04□□□□□ -0.64
APTX-228ENST00000486724 U2SURPO15042 1029 aaKnown RBP11.04□□□□□ -0.64
APTX-228ENST00000486724 CAPN2P17655 700 aa11.04□□□□□ -0.64
APTX-228ENST00000486724 IREB2P48200 963 aaKnown RBP11.04□□□□□ -0.64
APTX-228ENST00000486724 UBXN2AP68543 259 aa11.04□□□□□ -0.64
APTX-228ENST00000486724 MCM10Q7L590 875 aa11.04□□□□□ -0.64
APTX-228ENST00000486724 PODNQ7Z5L7 613 aa11.04□□□□□ -0.64
APTX-228ENST00000486724 NLRP10Q86W26 655 aa11.04□□□□□ -0.64
APTX-228ENST00000486724 RAET1EQ8TD07 263 aa11.04□□□□□ -0.64
APTX-228ENST00000486724 DEFB129Q9H1M3 183 aa11.04□□□□□ -0.64
APTX-228ENST00000486724 GGA1Q9UJY5 639 aa11.04□□□□□ -0.64
APTX-228ENST00000486724 RIPOR2Q9Y4F9 1068 aa11.04□□□□□ -0.64
APTX-228ENST00000486724 MYO3BQ8WXR4 1341 aa11.04□□□□□ -0.64
APTX-228ENST00000486724 CDH23Q9H251 3354 aa11.03□□□□□ -0.64
APTX-228ENST00000486724 OTOFQ9HC10 1997 aa11.03□□□□□ -0.64
APTX-228ENST00000486724 POTEB2H3BUK9 544 aa11.03□□□□□ -0.64
APTX-228ENST00000486724 TLR2O60603 784 aa11.03□□□□□ -0.64
APTX-228ENST00000486724 SGPL1O95470 568 aa11.03□□□□□ -0.64
APTX-228ENST00000486724 MAGEA10P43363 369 aaPredicted RBP11.03□□□□□ -0.64
APTX-228ENST00000486724 MMP14P50281 582 aa11.03□□□□□ -0.64
APTX-228ENST00000486724 HSP90AB3PQ58FF7 597 aa11.03□□□□□ -0.64
APTX-228ENST00000486724 ANKRD13AQ8IZ07 590 aa11.03□□□□□ -0.64
APTX-228ENST00000486724 C7orf61Q8IZ16 206 aa11.03□□□□□ -0.64
APTX-228ENST00000486724 MAFAQ8NHW3 353 aaPredicted RBP11.03□□□□□ -0.64
APTX-228ENST00000486724 BRI3BPQ8WY22 251 aa11.03□□□□□ -0.64
APTX-228ENST00000486724 OPTNQ96CV9 577 aa11.03□□□□□ -0.64
APTX-228ENST00000486724 MS4A4AQ96JQ5 239 aa11.03□□□□□ -0.64
APTX-228ENST00000486724 TRIM47Q96LD4 638 aa11.03□□□□□ -0.64
APTX-228ENST00000486724 ANKIB1Q9P2G1 1089 aa11.03□□□□□ -0.64
APTX-228ENST00000486724 BIN2Q9UBW5 565 aaPredicted RBP11.03□□□□□ -0.64
APTX-228ENST00000486724 SRRDQ9UH36 339 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms