RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 PODXL2Q9NZ53 605 aa20.15■□□□□ 0.82
U2AF1-211ENST00000486519 OTOFQ9HC10 1997 aa20.14■□□□□ 0.81
U2AF1-211ENST00000486519 SHISA4Q96DD7 197 aa20.14■□□□□ 0.81
U2AF1-211ENST00000486519 NF2P35240 595 aa20.13■□□□□ 0.81
U2AF1-211ENST00000486519 RPS8P62241 208 aaKnown RBP20.13■□□□□ 0.81
U2AF1-211ENST00000486519 SP3Q02447 781 aa20.13■□□□□ 0.81
U2AF1-211ENST00000486519 HSP90AB3PQ58FF7 597 aa20.13■□□□□ 0.81
U2AF1-211ENST00000486519 SH3TC2Q8TF17 1288 aa20.13■□□□□ 0.81
U2AF1-211ENST00000486519 SPEF2Q9C093 1822 aa20.13■□□□□ 0.81
U2AF1-211ENST00000486519 USP17L3A6NCW0 530 aa20.12■□□□□ 0.81
U2AF1-211ENST00000486519 USP17L4A6NCW7 530 aa20.12■□□□□ 0.81
U2AF1-211ENST00000486519 MNX1P50219 401 aaPredicted RBP20.12■□□□□ 0.81
U2AF1-211ENST00000486519 SLC9C1Q4G0N8 1177 aa20.12■□□□□ 0.81
U2AF1-211ENST00000486519 USP17L1Q7RTZ2 530 aa20.12■□□□□ 0.81
U2AF1-211ENST00000486519 GGA1Q9UJY5 639 aa20.12■□□□□ 0.81
U2AF1-211ENST00000486519 UNC80Q8N2C7 3258 aa20.12■□□□□ 0.81
U2AF1-211ENST00000486519 ATP5J2-PTCD1G3V325 749 aa20.11■□□□□ 0.81
U2AF1-211ENST00000486519 SLC10A4Q96EP9 437 aa20.11■□□□□ 0.81
U2AF1-211ENST00000486519 ANKIB1Q9P2G1 1089 aa20.11■□□□□ 0.81
U2AF1-211ENST00000486519 TIMELESSQ9UNS1 1208 aa20.11■□□□□ 0.81
U2AF1-211ENST00000486519 INHBEP58166 350 aa20.1■□□□□ 0.81
U2AF1-211ENST00000486519 DACT2Q5SW24 774 aa20.1■□□□□ 0.81
U2AF1-211ENST00000486519 DPF3Q92784 378 aa20.1■□□□□ 0.81
U2AF1-211ENST00000486519 CFAP53Q96M91 514 aa20.09■□□□□ 0.81
U2AF1-211ENST00000486519 ZBTB48P10074 688 aaPredicted RBP20.08■□□□□ 0.81
U2AF1-211ENST00000486519 ISCA1Q9BUE6 129 aa20.08■□□□□ 0.81
U2AF1-211ENST00000486519 ARHGAP39Q9C0H5 1083 aa20.08■□□□□ 0.81
U2AF1-211ENST00000486519 NUDCQ9Y266 331 aa20.08■□□□□ 0.81
U2AF1-211ENST00000486519 ECM29Q5VYK3 1845 aa20.08■□□□□ 0.8
U2AF1-211ENST00000486519 IRS4O14654 1257 aaPredicted RBP20.06■□□□□ 0.8
U2AF1-211ENST00000486519 MTFR1Q15390 333 aa20.06■□□□□ 0.8
U2AF1-211ENST00000486519 MAP3K11Q16584 847 aa20.06■□□□□ 0.8
U2AF1-211ENST00000486519 KRT24Q2M2I5 525 aa20.06■□□□□ 0.8
U2AF1-211ENST00000486519 ZBED3Q96IU2 234 aaPredicted RBP20.06■□□□□ 0.8
U2AF1-211ENST00000486519 COL25A1Q9BXS0 654 aaPredicted RBP20.06■□□□□ 0.8
U2AF1-211ENST00000486519 PCDHAC2Q9Y5I4 1007 aa20.06■□□□□ 0.8
U2AF1-211ENST00000486519 FBXW7Q969H0 707 aa20.05■□□□□ 0.8
U2AF1-211ENST00000486519 CCDC85AQ96PX6 553 aaPredicted RBP20.05■□□□□ 0.8
U2AF1-211ENST00000486519 TSPYL4Q9UJ04 414 aa20.05■□□□□ 0.8
U2AF1-211ENST00000486519 ALPK3Q96L96 1907 aa20.04■□□□□ 0.8
U2AF1-211ENST00000486519 PODNQ7Z5L7 613 aa20.04■□□□□ 0.8
U2AF1-211ENST00000486519 UBE2Q1Q7Z7E8 422 aa20.04■□□□□ 0.8
U2AF1-211ENST00000486519 NBPF11Q86T75 865 aa20.04■□□□□ 0.8
U2AF1-211ENST00000486519 AOX1Q06278 1338 aa20.03■□□□□ 0.8
U2AF1-211ENST00000486519 TESPA1A2RU30 521 aaPredicted RBP20.03■□□□□ 0.8
U2AF1-211ENST00000486519 APOBEC3FQ8IUX4 373 aaKnown RBP20.03■□□□□ 0.8
U2AF1-211ENST00000486519 PLEKHF1Q96S99 279 aa20.03■□□□□ 0.8
U2AF1-211ENST00000486519 DEFB129Q9H1M3 183 aa20.03■□□□□ 0.8
U2AF1-211ENST00000486519 ECM2O94769 699 aaPredicted RBP20.02■□□□□ 0.8
U2AF1-211ENST00000486519 TXNRD3Q86VQ6 643 aa20.02■□□□□ 0.8
U2AF1-211ENST00000486519 CNKSR2Q8WXI2 1034 aa20.02■□□□□ 0.8
U2AF1-211ENST00000486519 JARID2Q92833 1246 aaPredicted RBP20.02■□□□□ 0.8
U2AF1-211ENST00000486519 ZBTB7BO15156 539 aaPredicted RBP20.01■□□□□ 0.79
U2AF1-211ENST00000486519 PPP2R1AP30153 589 aa20.01■□□□□ 0.79
U2AF1-211ENST00000486519 Q7L0L9 218 aa20.01■□□□□ 0.79
U2AF1-211ENST00000486519 KIAA0825Q8IV33 1275 aa20.01■□□□□ 0.79
U2AF1-211ENST00000486519 OGFOD1Q8N543 542 aa20.01■□□□□ 0.79
U2AF1-211ENST00000486519 MS4A4AQ96JQ5 239 aa20.01■□□□□ 0.79
U2AF1-211ENST00000486519 CHPF2Q9P2E5 772 aa20.01■□□□□ 0.79
U2AF1-211ENST00000486519 XDHP47989 1333 aa20.01■□□□□ 0.79
U2AF1-211ENST00000486519 COL1A1P02452 1464 aaPredicted RBP20■□□□□ 0.79
U2AF1-211ENST00000486519 NFE2L2Q16236 605 aa20■□□□□ 0.79
U2AF1-211ENST00000486519 NBPF12Q5TAG4 269 aaPredicted RBP20■□□□□ 0.79
U2AF1-211ENST00000486519 PLBD2Q8NHP8 589 aa20■□□□□ 0.79
U2AF1-211ENST00000486519 BRI3BPQ8WY22 251 aa20■□□□□ 0.79
U2AF1-211ENST00000486519 USP2O75604 605 aaPredicted RBP19.99■□□□□ 0.79
U2AF1-211ENST00000486519 MED23Q9ULK4 1368 aa19.98■□□□□ 0.79
U2AF1-211ENST00000486519 ATP2B4P23634 1241 aa19.98■□□□□ 0.79
U2AF1-211ENST00000486519 KLRK1P26718 216 aa19.98■□□□□ 0.79
U2AF1-211ENST00000486519 OTUD7BQ6GQQ9 843 aa19.98■□□□□ 0.79
U2AF1-211ENST00000486519 FAM43AQ8N2R8 423 aa19.98■□□□□ 0.79
U2AF1-211ENST00000486519 ELP3Q9H9T3 547 aa19.98■□□□□ 0.79
U2AF1-211ENST00000486519 STAP2Q9UGK3 403 aa19.98■□□□□ 0.79
U2AF1-211ENST00000486519 CTGFP29279 349 aa19.97■□□□□ 0.79
U2AF1-211ENST00000486519 TAF1CQ15572 869 aaPredicted RBP19.97■□□□□ 0.79
U2AF1-211ENST00000486519 STRIP1Q5VSL9 837 aa19.97■□□□□ 0.79
U2AF1-211ENST00000486519 OPTNQ96CV9 577 aa19.97■□□□□ 0.79
U2AF1-211ENST00000486519 CLRN2A0PK11 232 aa19.96■□□□□ 0.79
U2AF1-211ENST00000486519 PPP1R12BO60237 982 aaPredicted RBP19.96■□□□□ 0.79
U2AF1-211ENST00000486519 ANKRD13DQ6ZTN6 518 aa19.96■□□□□ 0.79
U2AF1-211ENST00000486519 VCANP13611 3396 aa19.95■□□□□ 0.78
U2AF1-211ENST00000486519 MYO3BQ8WXR4 1341 aa19.95■□□□□ 0.78
U2AF1-211ENST00000486519 CDAN1Q8IWY9 1227 aa19.94■□□□□ 0.78
U2AF1-211ENST00000486519 DEFB123Q8N688 67 aa19.94■□□□□ 0.78
U2AF1-211ENST00000486519 CERS5Q8N5B7 392 aa19.93■□□□□ 0.78
U2AF1-211ENST00000486519 ZBTB38Q8NAP3 1195 aaPredicted RBP19.93■□□□□ 0.78
U2AF1-211ENST00000486519 ZFYVE28Q9HCC9 887 aa19.93■□□□□ 0.78
U2AF1-211ENST00000486519 CCL15-CCL14A0A0B4J2E2 113 aa19.92■□□□□ 0.78
U2AF1-211ENST00000486519 A0A1W2PPC1 479 aa19.92■□□□□ 0.78
U2AF1-211ENST00000486519 GJA8P48165 433 aa19.92■□□□□ 0.78
U2AF1-211ENST00000486519 LACTBP83111 547 aaPredicted RBP19.92■□□□□ 0.78
U2AF1-211ENST00000486519 CCL15Q16663 113 aa19.92■□□□□ 0.78
U2AF1-211ENST00000486519 TTLL5Q6EMB2 1281 aa19.92■□□□□ 0.78
U2AF1-211ENST00000486519 ANKRD18AQ8IVF6 992 aa19.92■□□□□ 0.78
U2AF1-211ENST00000486519 MINPP1Q9UNW1 487 aa19.92■□□□□ 0.78
U2AF1-211ENST00000486519 ZNF804BA4D1E1 1349 aa19.92■□□□□ 0.78
U2AF1-211ENST00000486519 SPTBN5Q9NRC6 3674 aaKnown RBP19.92■□□□□ 0.78
U2AF1-211ENST00000486519 IREB2P48200 963 aaKnown RBP19.91■□□□□ 0.78
U2AF1-211ENST00000486519 GTF2IP78347 998 aa19.91■□□□□ 0.78
U2AF1-211ENST00000486519 TRIM28Q13263 835 aaKnown RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms