RNA–Protein interactions for RNA: ENST00000486461.1

PDZD11-204, Transcript of PDZ domain containing 11, humanhuman

TSL 3

Gene PDZD11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-204ENST00000486461 TESPA1A2RU30 521 aaPredicted RBP7.97□□□□□ -1.13
PDZD11-204ENST00000486461 WNT10BO00744 389 aa7.97□□□□□ -1.13
PDZD11-204ENST00000486461 PPP1R12BO60237 982 aaPredicted RBP7.97□□□□□ -1.13
PDZD11-204ENST00000486461 GNRH1P01148 92 aa7.97□□□□□ -1.13
PDZD11-204ENST00000486461 HOXD11P31277 338 aaPredicted RBP7.97□□□□□ -1.13
PDZD11-204ENST00000486461 TAF1CQ15572 869 aaPredicted RBP7.97□□□□□ -1.13
PDZD11-204ENST00000486461 MAP3K11Q16584 847 aa7.97□□□□□ -1.13
PDZD11-204ENST00000486461 APOBEC3FQ8IUX4 373 aaKnown RBP7.97□□□□□ -1.13
PDZD11-204ENST00000486461 OGFOD1Q8N543 542 aa7.97□□□□□ -1.13
PDZD11-204ENST00000486461 RNF208Q9H0X6 261 aa7.97□□□□□ -1.13
PDZD11-204ENST00000486461 USP17L3A6NCW0 530 aa7.96□□□□□ -1.14
PDZD11-204ENST00000486461 USP17L4A6NCW7 530 aa7.96□□□□□ -1.14
PDZD11-204ENST00000486461 UNCXA6NJT0 531 aa7.96□□□□□ -1.14
PDZD11-204ENST00000486461 U2SURPO15042 1029 aaKnown RBP7.96□□□□□ -1.14
PDZD11-204ENST00000486461 CCL5P13501 91 aa7.96□□□□□ -1.14
PDZD11-204ENST00000486461 USP17L1Q7RTZ2 530 aa7.96□□□□□ -1.14
PDZD11-204ENST00000486461 TDHQ8IZJ6 230 aa7.96□□□□□ -1.14
PDZD11-204ENST00000486461 RTF1Q92541 710 aaKnown RBP7.96□□□□□ -1.14
PDZD11-204ENST00000486461 CELF1Q92879 486 aaKnown RBP7.96□□□□□ -1.14
PDZD11-204ENST00000486461 ARHGAP39Q9C0H5 1083 aa7.96□□□□□ -1.14
PDZD11-204ENST00000486461 SH3TC1Q8TE82 1336 aa7.96□□□□□ -1.14
PDZD11-204ENST00000486461 IRS2Q9Y4H2 1338 aa7.96□□□□□ -1.14
PDZD11-204ENST00000486461 VCANP13611 3396 aa7.96□□□□□ -1.14
PDZD11-204ENST00000486461 WDHD1O75717 1129 aaPredicted RBP7.95□□□□□ -1.14
PDZD11-204ENST00000486461 UFL1O94874 794 aa7.95□□□□□ -1.14
PDZD11-204ENST00000486461 GRK4P32298 578 aa7.95□□□□□ -1.14
PDZD11-204ENST00000486461 GJA5P36382 358 aa7.95□□□□□ -1.14
PDZD11-204ENST00000486461 MCM10Q7L590 875 aa7.95□□□□□ -1.14
PDZD11-204ENST00000486461 U2AF1L4Q8WU68 220 aaKnown RBP7.95□□□□□ -1.14
PDZD11-204ENST00000486461 GUCD1Q96NT3 240 aa7.95□□□□□ -1.14
PDZD11-204ENST00000486461 BIN2Q9UBW5 565 aaPredicted RBP7.95□□□□□ -1.14
PDZD11-204ENST00000486461 TRMT112Q9UI30 125 aaKnown RBP7.95□□□□□ -1.14
PDZD11-204ENST00000486461 ZSWIM8A7E2V4 1837 aa7.94□□□□□ -1.14
PDZD11-204ENST00000486461 TMEM265A0A087WTH1 108 aa7.94□□□□□ -1.14
PDZD11-204ENST00000486461 SASH1O94885 1247 aa7.94□□□□□ -1.14
PDZD11-204ENST00000486461 IREB2P48200 963 aaKnown RBP7.94□□□□□ -1.14
PDZD11-204ENST00000486461 UBXN2AP68543 259 aa7.94□□□□□ -1.14
PDZD11-204ENST00000486461 LACTBP83111 547 aaPredicted RBP7.94□□□□□ -1.14
PDZD11-204ENST00000486461 RAET1EQ8TD07 263 aa7.94□□□□□ -1.14
PDZD11-204ENST00000486461 TRIM47Q96LD4 638 aa7.94□□□□□ -1.14
PDZD11-204ENST00000486461 PODXL2Q9NZ53 605 aa7.94□□□□□ -1.14
PDZD11-204ENST00000486461 ANKIB1Q9P2G1 1089 aa7.94□□□□□ -1.14
PDZD11-204ENST00000486461 GGA1Q9UJY5 639 aa7.94□□□□□ -1.14
PDZD11-204ENST00000486461 KNSTRNQ9Y448 316 aa7.94□□□□□ -1.14
PDZD11-204ENST00000486461 RIPOR2Q9Y4F9 1068 aa7.94□□□□□ -1.14
PDZD11-204ENST00000486461 COL1A1P02452 1464 aaPredicted RBP7.94□□□□□ -1.14
PDZD11-204ENST00000486461 TNFRSF10AO00220 468 aa7.93□□□□□ -1.14
PDZD11-204ENST00000486461 TLR2O60603 784 aa7.93□□□□□ -1.14
PDZD11-204ENST00000486461 ECM2O94769 699 aaPredicted RBP7.93□□□□□ -1.14
PDZD11-204ENST00000486461 SGPL1O95470 568 aa7.93□□□□□ -1.14
PDZD11-204ENST00000486461 HOXD10P28358 340 aa7.93□□□□□ -1.14
PDZD11-204ENST00000486461 RPS8P62241 208 aaKnown RBP7.93□□□□□ -1.14
PDZD11-204ENST00000486461 TAF7Q15545 349 aaPredicted RBP7.93□□□□□ -1.14
PDZD11-204ENST00000486461 SUPT20HL1Q3ZLR7 823 aa7.93□□□□□ -1.14
PDZD11-204ENST00000486461 HSP90AB3PQ58FF7 597 aa7.93□□□□□ -1.14
PDZD11-204ENST00000486461 FAM109BQ6ICB4 259 aaPredicted RBP7.93□□□□□ -1.14
PDZD11-204ENST00000486461 PODNQ7Z5L7 613 aa7.93□□□□□ -1.14
PDZD11-204ENST00000486461 NLRP10Q86W26 655 aa7.93□□□□□ -1.14
PDZD11-204ENST00000486461 ANKRD13AQ8IZ07 590 aa7.93□□□□□ -1.14
PDZD11-204ENST00000486461 BRI3BPQ8WY22 251 aa7.93□□□□□ -1.14
PDZD11-204ENST00000486461 MS4A4AQ96JQ5 239 aa7.93□□□□□ -1.14
PDZD11-204ENST00000486461 PHACTR3Q96KR7 559 aa7.93□□□□□ -1.14
PDZD11-204ENST00000486461 UBE2OQ9C0C9 1292 aaKnown RBP7.93□□□□□ -1.14
PDZD11-204ENST00000486461 DEFB129Q9H1M3 183 aa7.93□□□□□ -1.14
PDZD11-204ENST00000486461 SRRDQ9UH36 339 aa7.93□□□□□ -1.14
PDZD11-204ENST00000486461 ZMYND8Q9ULU4 1186 aaPredicted RBP7.93□□□□□ -1.14
PDZD11-204ENST00000486461 ALPK3Q96L96 1907 aa7.93□□□□□ -1.14
PDZD11-204ENST00000486461 CCL15-CCL14A0A0B4J2E2 113 aa7.92□□□□□ -1.14
PDZD11-204ENST00000486461 POTEB2H3BUK9 544 aa7.92□□□□□ -1.14
PDZD11-204ENST00000486461 TFRCP02786 760 aaKnown RBP7.92□□□□□ -1.14
PDZD11-204ENST00000486461 CAPN2P17655 700 aa7.92□□□□□ -1.14
PDZD11-204ENST00000486461 MAGEA10P43363 369 aaPredicted RBP7.92□□□□□ -1.14
PDZD11-204ENST00000486461 MMP14P50281 582 aa7.92□□□□□ -1.14
PDZD11-204ENST00000486461 DCTN1Q14203 1278 aa7.92□□□□□ -1.14
PDZD11-204ENST00000486461 SF3B3Q15393 1217 aaKnown RBP7.92□□□□□ -1.14
PDZD11-204ENST00000486461 CCL15Q16663 113 aa7.92□□□□□ -1.14
PDZD11-204ENST00000486461 C7orf61Q8IZ16 206 aa7.92□□□□□ -1.14
PDZD11-204ENST00000486461 FAM43AQ8N2R8 423 aa7.92□□□□□ -1.14
PDZD11-204ENST00000486461 MAFAQ8NHW3 353 aaPredicted RBP7.92□□□□□ -1.14
PDZD11-204ENST00000486461 FBXW7Q969H0 707 aa7.92□□□□□ -1.14
PDZD11-204ENST00000486461 OPTNQ96CV9 577 aa7.92□□□□□ -1.14
PDZD11-204ENST00000486461 FAM161BQ96MY7 647 aa7.92□□□□□ -1.14
PDZD11-204ENST00000486461 MIS18AQ9NYP9 233 aa7.92□□□□□ -1.14
PDZD11-204ENST00000486461 MYO3BQ8WXR4 1341 aa7.92□□□□□ -1.14
PDZD11-204ENST00000486461 USP2O75604 605 aaPredicted RBP7.91□□□□□ -1.14
PDZD11-204ENST00000486461 PRKAR2BP31323 418 aa7.91□□□□□ -1.14
PDZD11-204ENST00000486461 PSMC4P43686 418 aa7.91□□□□□ -1.14
PDZD11-204ENST00000486461 GTF2A2P52657 109 aa7.91□□□□□ -1.14
PDZD11-204ENST00000486461 HELBQ8NG08 1087 aaPredicted RBP7.91□□□□□ -1.14
PDZD11-204ENST00000486461 THUMPD2Q9BTF0 503 aaKnown RBP7.91□□□□□ -1.14
PDZD11-204ENST00000486461 MXD3Q9BW11 206 aa7.91□□□□□ -1.14
PDZD11-204ENST00000486461 UNC93B1Q9H1C4 597 aa7.91□□□□□ -1.14
PDZD11-204ENST00000486461 ELP3Q9H9T3 547 aa7.91□□□□□ -1.14
PDZD11-204ENST00000486461 PPP2R3BQ9Y5P8 575 aa7.91□□□□□ -1.14
PDZD11-204ENST00000486461 SSC5DA1L4H1 1573 aa7.91□□□□□ -1.14
PDZD11-204ENST00000486461 MYPNQ86TC9 1320 aa7.9□□□□□ -1.14
PDZD11-204ENST00000486461 FMNL1O95466 1100 aaPredicted RBP7.9□□□□□ -1.14
PDZD11-204ENST00000486461 SYN1P17600 705 aa7.9□□□□□ -1.14
PDZD11-204ENST00000486461 OSBPP22059 807 aa7.9□□□□□ -1.14
PDZD11-204ENST00000486461 MAP3K12Q12852 859 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms