RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 UBE4AQ14139 1066 aa14.07□□□□□ -0.16
NUP50-216ENST00000486184 PUM3Q15397 648 aaKnown RBP14.07□□□□□ -0.16
NUP50-216ENST00000486184 AOC3Q16853 763 aa14.07□□□□□ -0.16
NUP50-216ENST00000486184 SIRT2Q8IXJ6 389 aa14.07□□□□□ -0.16
NUP50-216ENST00000486184 RWDD1Q9H446 243 aaPredicted RBP14.07□□□□□ -0.16
NUP50-216ENST00000486184 AKAP2Q9Y2D5 859 aa14.07□□□□□ -0.16
NUP50-216ENST00000486184 NOP58Q9Y2X3 529 aaKnown RBP14.07□□□□□ -0.16
NUP50-216ENST00000486184 PCDHB15Q9Y5E8 787 aa14.07□□□□□ -0.16
NUP50-216ENST00000486184 MED23Q9ULK4 1368 aa14.07□□□□□ -0.16
NUP50-216ENST00000486184 APBB1O00213 710 aa14.06□□□□□ -0.16
NUP50-216ENST00000486184 IFIT1P09914 478 aaKnown RBP14.06□□□□□ -0.16
NUP50-216ENST00000486184 SLC5A1P13866 664 aa14.06□□□□□ -0.16
NUP50-216ENST00000486184 TFCP2Q12800 502 aa14.06□□□□□ -0.16
NUP50-216ENST00000486184 ATP2B3Q16720 1220 aa14.06□□□□□ -0.16
NUP50-216ENST00000486184 C9orf131Q5VYM1 1079 aa14.06□□□□□ -0.16
NUP50-216ENST00000486184 NIM1KQ8IY84 436 aa14.06□□□□□ -0.16
NUP50-216ENST00000486184 ZBTB47Q9UFB7 747 aaPredicted RBP14.06□□□□□ -0.16
NUP50-216ENST00000486184 RAB11FIP3O75154 756 aa14.05□□□□□ -0.16
NUP50-216ENST00000486184 KIAA2012Q0VF49 1180 aa14.05□□□□□ -0.16
NUP50-216ENST00000486184 ZNF804AQ7Z570 1209 aa14.05□□□□□ -0.16
NUP50-216ENST00000486184 VPS37DQ86XT2 251 aa14.05□□□□□ -0.16
NUP50-216ENST00000486184 GPR101Q96P66 508 aaPredicted RBP14.05□□□□□ -0.16
NUP50-216ENST00000486184 PSME4Q14997 1843 aa14.05□□□□□ -0.16
NUP50-216ENST00000486184 CAVIN4Q5BKX8 364 aa14.04□□□□□ -0.16
NUP50-216ENST00000486184 VGLL2Q8N8G2 317 aa14.04□□□□□ -0.16
NUP50-216ENST00000486184 LPIN2Q92539 896 aa14.04□□□□□ -0.16
NUP50-216ENST00000486184 BCL11AQ9H165 835 aa14.04□□□□□ -0.16
NUP50-216ENST00000486184 HDAC1Q13547 482 aaPredicted RBP14.03□□□□□ -0.16
NUP50-216ENST00000486184 GORABQ5T7V8 394 aa14.03□□□□□ -0.16
NUP50-216ENST00000486184 KIF1BPQ96EK5 621 aa14.03□□□□□ -0.16
NUP50-216ENST00000486184 NEUROD6Q96NK8 337 aa14.03□□□□□ -0.16
NUP50-216ENST00000486184 ZNF609O15014 1411 aa14.03□□□□□ -0.16
NUP50-216ENST00000486184 ZC3H4Q9UPT8 1303 aaKnown RBP14.02□□□□□ -0.17
NUP50-216ENST00000486184 A0A1B0GUL7 405 aa14.02□□□□□ -0.17
NUP50-216ENST00000486184 SNAP23O00161 211 aa14.02□□□□□ -0.17
NUP50-216ENST00000486184 ECE2O60344 883 aa14.02□□□□□ -0.17
NUP50-216ENST00000486184 SASH1O94885 1247 aa14.02□□□□□ -0.17
NUP50-216ENST00000486184 EIF6P56537 245 aaKnown RBP14.02□□□□□ -0.17
NUP50-216ENST00000486184 DOK7Q18PE1 504 aa14.02□□□□□ -0.17
NUP50-216ENST00000486184 C15orf52Q6ZUT6 534 aaKnown RBP14.02□□□□□ -0.17
NUP50-216ENST00000486184 CLASRPQ8N2M8 674 aaKnown RBP14.02□□□□□ -0.17
NUP50-216ENST00000486184 RHPN1Q8TCX5 695 aa14.02□□□□□ -0.17
NUP50-216ENST00000486184 GCC1Q96CN9 775 aa14.02□□□□□ -0.17
NUP50-216ENST00000486184 LRRCC1Q9C099 1032 aa14.02□□□□□ -0.17
NUP50-216ENST00000486184 DCTPP1Q9H773 170 aa14.02□□□□□ -0.17
NUP50-216ENST00000486184 DBNDD1Q9H9R9 158 aa14.02□□□□□ -0.17
NUP50-216ENST00000486184 WTIPA6NIX2 430 aaPredicted RBP14.01□□□□□ -0.17
NUP50-216ENST00000486184 FRAT2O75474 233 aaPredicted RBP14.01□□□□□ -0.17
NUP50-216ENST00000486184 KLRK1P26718 216 aa14.01□□□□□ -0.17
NUP50-216ENST00000486184 PRELPP51888 382 aa14.01□□□□□ -0.17
NUP50-216ENST00000486184 TNNI3KQ59H18 835 aa14.01□□□□□ -0.17
NUP50-216ENST00000486184 COA1Q9GZY4 146 aa14.01□□□□□ -0.17
NUP50-216ENST00000486184 GPR108Q9NPR9 543 aa14.01□□□□□ -0.17
NUP50-216ENST00000486184 ZNRF3Q9ULT6 936 aa14.01□□□□□ -0.17
NUP50-216ENST00000486184 FPGT-TNNI3KV9GXZ4 949 aa14.01□□□□□ -0.17
NUP50-216ENST00000486184 COL4A5P29400 1685 aa14.01□□□□□ -0.17
NUP50-216ENST00000486184 SCN9AQ15858 1988 aa14□□□□□ -0.17
NUP50-216ENST00000486184 FGFR2P21802 821 aa14□□□□□ -0.17
NUP50-216ENST00000486184 HIBADHP31937 336 aaKnown RBP14□□□□□ -0.17
NUP50-216ENST00000486184 GYG1P46976 350 aa14□□□□□ -0.17
NUP50-216ENST00000486184 AACSQ86V21 672 aa14□□□□□ -0.17
NUP50-216ENST00000486184 TXNRD3Q86VQ6 643 aa14□□□□□ -0.17
NUP50-216ENST00000486184 FBXW7Q969H0 707 aa14□□□□□ -0.17
NUP50-216ENST00000486184 IL1RAPL2Q9NP60 686 aa14□□□□□ -0.17
NUP50-216ENST00000486184 GNL3LQ9NVN8 582 aaKnown RBP14□□□□□ -0.17
NUP50-216ENST00000486184 IFIT2P09913 472 aaKnown RBP13.99□□□□□ -0.17
NUP50-216ENST00000486184 TIMM10P62072 90 aa13.99□□□□□ -0.17
NUP50-216ENST00000486184 DPY19L2Q6NUT2 758 aa13.99□□□□□ -0.17
NUP50-216ENST00000486184 PODNQ7Z5L7 613 aa13.99□□□□□ -0.17
NUP50-216ENST00000486184 XAGE2Q96GT9 111 aa13.99□□□□□ -0.17
NUP50-216ENST00000486184 TNIP1Q15025 636 aa13.98□□□□□ -0.17
NUP50-216ENST00000486184 CCDC158Q5M9N0 1113 aa13.98□□□□□ -0.17
NUP50-216ENST00000486184 ERICH6BQ5W0A0 696 aa13.98□□□□□ -0.17
NUP50-216ENST00000486184 FAM84BQ96KN1 310 aaPredicted RBP13.98□□□□□ -0.17
NUP50-216ENST00000486184 CD209Q9NNX6 404 aa13.98□□□□□ -0.17
NUP50-216ENST00000486184 IRS2Q9Y4H2 1338 aa13.97□□□□□ -0.17
NUP50-216ENST00000486184 FZD9O00144 591 aa13.97□□□□□ -0.17
NUP50-216ENST00000486184 RAD17O75943 681 aa13.97□□□□□ -0.17
NUP50-216ENST00000486184 IGHDP01880 384 aa13.97□□□□□ -0.17
NUP50-216ENST00000486184 ADORA1P30542 326 aa13.97□□□□□ -0.17
NUP50-216ENST00000486184 BCAMP50895 628 aa13.97□□□□□ -0.17
NUP50-216ENST00000486184 TTC39AQ5SRH9 613 aa13.97□□□□□ -0.17
NUP50-216ENST00000486184 ANKRD45Q5TZF3 282 aa13.97□□□□□ -0.17
NUP50-216ENST00000486184 CIAPIN1Q6FI81 312 aa13.97□□□□□ -0.17
NUP50-216ENST00000486184 CCDC136Q96JN2 1154 aa13.97□□□□□ -0.17
NUP50-216ENST00000486184 CCDC8Q9H0W5 538 aaPredicted RBP13.97□□□□□ -0.17
NUP50-216ENST00000486184 GJA3Q9Y6H8 435 aa13.97□□□□□ -0.17
NUP50-216ENST00000486184 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.97□□□□□ -0.17
NUP50-216ENST00000486184 GOLGB1Q14789 3259 aaKnown RBP13.97□□□□□ -0.17
NUP50-216ENST00000486184 ZNF646O15015 1829 aaPredicted RBP13.97□□□□□ -0.17
NUP50-216ENST00000486184 KDM2BQ8NHM5 1336 aa13.96□□□□□ -0.17
NUP50-216ENST00000486184 ZNF541Q9H0D2 1346 aa13.96□□□□□ -0.17
NUP50-216ENST00000486184 USP17L3A6NCW0 530 aa13.96□□□□□ -0.17
NUP50-216ENST00000486184 USP17L4A6NCW7 530 aa13.96□□□□□ -0.17
NUP50-216ENST00000486184 SMARCA5O60264 1052 aaPredicted RBP13.96□□□□□ -0.17
NUP50-216ENST00000486184 IL1R1P14778 569 aa13.96□□□□□ -0.17
NUP50-216ENST00000486184 CCDC102BQ68D86 513 aa13.96□□□□□ -0.17
NUP50-216ENST00000486184 B4GALNT3Q6L9W6 998 aa13.96□□□□□ -0.17
NUP50-216ENST00000486184 USP17L1Q7RTZ2 530 aa13.96□□□□□ -0.17
NUP50-216ENST00000486184 FBXO33Q7Z6M2 555 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms