RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 PSMD14O00487 310 aa15.52■□□□□ 0.08
HMG20B-211ENST00000486028 SCNN1DP51172 638 aa15.52■□□□□ 0.08
HMG20B-211ENST00000486028 FSTL1Q12841 308 aa15.52■□□□□ 0.08
HMG20B-211ENST00000486028 UBE4AQ14139 1066 aa15.52■□□□□ 0.08
HMG20B-211ENST00000486028 LRRC24Q50LG9 513 aa15.52■□□□□ 0.08
HMG20B-211ENST00000486028 PNMA8AQ86V59 439 aaPredicted RBP15.52■□□□□ 0.08
HMG20B-211ENST00000486028 TXNRD3Q86VQ6 643 aa15.52■□□□□ 0.08
HMG20B-211ENST00000486028 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.52■□□□□ 0.08
HMG20B-211ENST00000486028 SMC1BQ8NDV3 1235 aa15.52■□□□□ 0.08
HMG20B-211ENST00000486028 PANK1Q8TE04 598 aa15.52■□□□□ 0.08
HMG20B-211ENST00000486028 KCNQ5Q9NR82 932 aa15.52■□□□□ 0.08
HMG20B-211ENST00000486028 GPRC5DQ9NZD1 345 aa15.52■□□□□ 0.08
HMG20B-211ENST00000486028 SNAP23O00161 211 aa15.51■□□□□ 0.07
HMG20B-211ENST00000486028 EYA2O00167 538 aa15.51■□□□□ 0.07
HMG20B-211ENST00000486028 ZBTB7BO15156 539 aaPredicted RBP15.51■□□□□ 0.07
HMG20B-211ENST00000486028 SRGAP3O43295 1099 aa15.51■□□□□ 0.07
HMG20B-211ENST00000486028 VIL1P09327 827 aaKnown RBP15.51■□□□□ 0.07
HMG20B-211ENST00000486028 EPS15P42566 896 aa15.51■□□□□ 0.07
HMG20B-211ENST00000486028 PTPN12Q05209 780 aaKnown RBP15.51■□□□□ 0.07
HMG20B-211ENST00000486028 USP17L3A6NCW0 530 aa15.5■□□□□ 0.07
HMG20B-211ENST00000486028 USP17L4A6NCW7 530 aa15.5■□□□□ 0.07
HMG20B-211ENST00000486028 H7C1D1 291 aa15.5■□□□□ 0.07
HMG20B-211ENST00000486028 CIAO1O76071 339 aa15.5■□□□□ 0.07
HMG20B-211ENST00000486028 RPS12P25398 132 aaKnown RBP15.5■□□□□ 0.07
HMG20B-211ENST00000486028 KLRK1P26718 216 aa15.5■□□□□ 0.07
HMG20B-211ENST00000486028 MTX1Q13505 466 aa15.5■□□□□ 0.07
HMG20B-211ENST00000486028 EAPPQ56P03 285 aaPredicted RBP15.5■□□□□ 0.07
HMG20B-211ENST00000486028 USP17L1Q7RTZ2 530 aa15.5■□□□□ 0.07
HMG20B-211ENST00000486028 ZNF804AQ7Z570 1209 aa15.5■□□□□ 0.07
HMG20B-211ENST00000486028 LDHDQ86WU2 507 aa15.5■□□□□ 0.07
HMG20B-211ENST00000486028 DPF2Q92785 391 aa15.5■□□□□ 0.07
HMG20B-211ENST00000486028 CNOT7Q9UIV1 285 aaKnown RBP15.5■□□□□ 0.07
HMG20B-211ENST00000486028 ZBTB12Q9Y330 459 aaPredicted RBP15.5■□□□□ 0.07
HMG20B-211ENST00000486028 SCN4AP35499 1836 aa15.5■□□□□ 0.07
HMG20B-211ENST00000486028 PDE8BO95263 885 aa15.49■□□□□ 0.07
HMG20B-211ENST00000486028 CHADLQ6NUI6 762 aa15.49■□□□□ 0.07
HMG20B-211ENST00000486028 SIL1Q9H173 461 aa15.49■□□□□ 0.07
HMG20B-211ENST00000486028 COPRSQ9NQ92 184 aa15.49■□□□□ 0.07
HMG20B-211ENST00000486028 ADARB2Q9NS39 739 aaKnown RBP15.49■□□□□ 0.07
HMG20B-211ENST00000486028 CLEC11AQ9Y240 323 aa15.49■□□□□ 0.07
HMG20B-211ENST00000486028 IRS2Q9Y4H2 1338 aa15.48■□□□□ 0.07
HMG20B-211ENST00000486028 IL15P40933 162 aaPredicted RBP15.48■□□□□ 0.07
HMG20B-211ENST00000486028 RSBN1LQ6PCB5 846 aaPredicted RBP15.48■□□□□ 0.07
HMG20B-211ENST00000486028 USP50Q70EL3 339 aaPredicted RBP15.48■□□□□ 0.07
HMG20B-211ENST00000486028 ATG9AQ7Z3C6 839 aa15.48■□□□□ 0.07
HMG20B-211ENST00000486028 VGLL2Q8N8G2 317 aa15.48■□□□□ 0.07
HMG20B-211ENST00000486028 CD209Q9NNX6 404 aa15.48■□□□□ 0.07
HMG20B-211ENST00000486028 CEP126Q9P2H0 1117 aa15.48■□□□□ 0.07
HMG20B-211ENST00000486028 PDE3AQ14432 1141 aa15.47■□□□□ 0.07
HMG20B-211ENST00000486028 MVPQ14764 893 aaKnown RBP15.47■□□□□ 0.07
HMG20B-211ENST00000486028 PUM3Q15397 648 aaKnown RBP15.47■□□□□ 0.07
HMG20B-211ENST00000486028 STRIP1Q5VSL9 837 aa15.47■□□□□ 0.07
HMG20B-211ENST00000486028 TTLL5Q6EMB2 1281 aa15.47■□□□□ 0.07
HMG20B-211ENST00000486028 MICALL2Q8IY33 904 aa15.47■□□□□ 0.07
HMG20B-211ENST00000486028 AGBL3Q8NEM8 1001 aa15.47■□□□□ 0.07
HMG20B-211ENST00000486028 FBXW7Q969H0 707 aa15.47■□□□□ 0.07
HMG20B-211ENST00000486028 CHMP4BQ9H444 224 aaKnown RBP15.47■□□□□ 0.07
HMG20B-211ENST00000486028 PA2G4Q9UQ80 394 aaKnown RBP15.47■□□□□ 0.07
HMG20B-211ENST00000486028 IFIT1P09914 478 aaKnown RBP15.46■□□□□ 0.07
HMG20B-211ENST00000486028 POTEIP0CG38 1075 aa15.46■□□□□ 0.07
HMG20B-211ENST00000486028 POTEJP0CG39 1038 aa15.46■□□□□ 0.07
HMG20B-211ENST00000486028 IL1R1P14778 569 aa15.46■□□□□ 0.07
HMG20B-211ENST00000486028 HSPA6P17066 643 aa15.46■□□□□ 0.07
HMG20B-211ENST00000486028 HIBADHP31937 336 aaKnown RBP15.46■□□□□ 0.07
HMG20B-211ENST00000486028 ATP8B2P98198 1209 aa15.46■□□□□ 0.07
HMG20B-211ENST00000486028 CAVIN4Q5BKX8 364 aa15.46■□□□□ 0.07
HMG20B-211ENST00000486028 DACT2Q5SW24 774 aa15.46■□□□□ 0.07
HMG20B-211ENST00000486028 VPS37DQ86XT2 251 aa15.46■□□□□ 0.07
HMG20B-211ENST00000486028 DDX19BQ9UMR2 479 aa15.46■□□□□ 0.07
HMG20B-211ENST00000486028 COG6Q9Y2V7 657 aa15.46■□□□□ 0.07
HMG20B-211ENST00000486028 U3KPZ7 1027 aaPredicted RBP15.46■□□□□ 0.07
HMG20B-211ENST00000486028 PNMA6EA0A0J9YXQ4 647 aa15.45■□□□□ 0.06
HMG20B-211ENST00000486028 SLC5A1P13866 664 aa15.45■□□□□ 0.06
HMG20B-211ENST00000486028 GYG1P46976 350 aa15.45■□□□□ 0.06
HMG20B-211ENST00000486028 GTF2IP78347 998 aa15.45■□□□□ 0.06
HMG20B-211ENST00000486028 FAM84BQ96KN1 310 aaPredicted RBP15.45■□□□□ 0.06
HMG20B-211ENST00000486028 C1orf115Q9H7X2 142 aa15.45■□□□□ 0.06
HMG20B-211ENST00000486028 MYO3BQ8WXR4 1341 aa15.44■□□□□ 0.06
HMG20B-211ENST00000486028 USP17L8P0C7I0 530 aa15.44■□□□□ 0.06
HMG20B-211ENST00000486028 FGFR2P21802 821 aa15.44■□□□□ 0.06
HMG20B-211ENST00000486028 G3BP1Q13283 466 aaKnown RBP eCLIP15.44■□□□□ 0.06
HMG20B-211ENST00000486028 FBXO33Q7Z6M2 555 aa15.44■□□□□ 0.06
HMG20B-211ENST00000486028 LPIN2Q92539 896 aa15.44■□□□□ 0.06
HMG20B-211ENST00000486028 GMLQ99445 158 aa15.44■□□□□ 0.06
HMG20B-211ENST00000486028 SCN9AQ15858 1988 aa15.44■□□□□ 0.06
HMG20B-211ENST00000486028 SHTN1A0MZ66 631 aa15.43■□□□□ 0.06
HMG20B-211ENST00000486028 SASH1O94885 1247 aa15.43■□□□□ 0.06
HMG20B-211ENST00000486028 MMP14P50281 582 aa15.43■□□□□ 0.06
HMG20B-211ENST00000486028 ZNF280AP59817 542 aaPredicted RBP15.43■□□□□ 0.06
HMG20B-211ENST00000486028 POLA2Q14181 598 aa15.43■□□□□ 0.06
HMG20B-211ENST00000486028 ATP2B3Q16720 1220 aa15.43■□□□□ 0.06
HMG20B-211ENST00000486028 OGFOD1Q8N543 542 aa15.43■□□□□ 0.06
HMG20B-211ENST00000486028 TDRD7Q8NHU6 1098 aaKnown RBP15.43■□□□□ 0.06
HMG20B-211ENST00000486028 SSH3Q8TE77 659 aa15.43■□□□□ 0.06
HMG20B-211ENST00000486028 ZC3H15Q8WU90 426 aaKnown RBP15.43■□□□□ 0.06
HMG20B-211ENST00000486028 ZNF609O15014 1411 aa15.43■□□□□ 0.06
HMG20B-211ENST00000486028 SPDYE4A6NLX3 237 aa15.42■□□□□ 0.06
HMG20B-211ENST00000486028 FRAT2O75474 233 aaPredicted RBP15.42■□□□□ 0.06
HMG20B-211ENST00000486028 APLP1P51693 650 aa15.42■□□□□ 0.06
HMG20B-211ENST00000486028 HIRAP54198 1017 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms