RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 METTL24Q5JXM2 366 aa22.15■■□□□ 1.14
SREBF1-213ENST00000485080 DCAF8Q5TAQ9 597 aa22.15■■□□□ 1.14
SREBF1-213ENST00000485080 DPF2Q92785 391 aa22.15■■□□□ 1.14
SREBF1-213ENST00000485080 CHMP4BQ9H444 224 aaKnown RBP22.15■■□□□ 1.14
SREBF1-213ENST00000485080 TAF1DQ9H5J8 278 aaPredicted RBP22.15■■□□□ 1.14
SREBF1-213ENST00000485080 HACL1Q9UJ83 578 aa22.15■■□□□ 1.14
SREBF1-213ENST00000485080 SNAP23O00161 211 aa22.14■■□□□ 1.13
SREBF1-213ENST00000485080 RPS12P25398 132 aaKnown RBP22.14■■□□□ 1.13
SREBF1-213ENST00000485080 KLRK1P26718 216 aa22.14■■□□□ 1.13
SREBF1-213ENST00000485080 IL15P40933 162 aaPredicted RBP22.14■■□□□ 1.13
SREBF1-213ENST00000485080 C16orf71Q8IYS4 520 aaPredicted RBP22.14■■□□□ 1.13
SREBF1-213ENST00000485080 PSME4Q14997 1843 aa22.14■■□□□ 1.13
SREBF1-213ENST00000485080 PSMD14O00487 310 aa22.13■■□□□ 1.13
SREBF1-213ENST00000485080 C1QTNF8P60827 252 aa22.13■■□□□ 1.13
SREBF1-213ENST00000485080 ATP8B2P98198 1209 aa22.13■■□□□ 1.13
SREBF1-213ENST00000485080 KCNQ5Q9NR82 932 aa22.13■■□□□ 1.13
SREBF1-213ENST00000485080 GPRC5DQ9NZD1 345 aa22.13■■□□□ 1.13
SREBF1-213ENST00000485080 FGFR2P21802 821 aa22.12■■□□□ 1.13
SREBF1-213ENST00000485080 LMOD1P29536 600 aaPredicted RBP22.12■■□□□ 1.13
SREBF1-213ENST00000485080 GMPSP49915 693 aaPredicted RBP22.12■■□□□ 1.13
SREBF1-213ENST00000485080 POLA2Q14181 598 aa22.12■■□□□ 1.13
SREBF1-213ENST00000485080 SSH3Q8TE77 659 aa22.12■■□□□ 1.13
SREBF1-213ENST00000485080 CD209Q9NNX6 404 aa22.12■■□□□ 1.13
SREBF1-213ENST00000485080 ZBTB40Q9NUA8 1239 aa22.12■■□□□ 1.13
SREBF1-213ENST00000485080 PNMA6EA0A0J9YXQ4 647 aa22.11■■□□□ 1.13
SREBF1-213ENST00000485080 USP17L3A6NCW0 530 aa22.11■■□□□ 1.13
SREBF1-213ENST00000485080 USP17L4A6NCW7 530 aa22.11■■□□□ 1.13
SREBF1-213ENST00000485080 IL1R1P14778 569 aa22.11■■□□□ 1.13
SREBF1-213ENST00000485080 EPHX2P34913 555 aa22.11■■□□□ 1.13
SREBF1-213ENST00000485080 FSTL1Q12841 308 aa22.11■■□□□ 1.13
SREBF1-213ENST00000485080 PUM3Q15397 648 aaKnown RBP22.11■■□□□ 1.13
SREBF1-213ENST00000485080 STRIP1Q5VSL9 837 aa22.11■■□□□ 1.13
SREBF1-213ENST00000485080 USP17L1Q7RTZ2 530 aa22.11■■□□□ 1.13
SREBF1-213ENST00000485080 ZNF804AQ7Z570 1209 aa22.11■■□□□ 1.13
SREBF1-213ENST00000485080 PNMA8AQ86V59 439 aaPredicted RBP22.11■■□□□ 1.13
SREBF1-213ENST00000485080 PA2G4Q9UQ80 394 aaKnown RBP22.11■■□□□ 1.13
SREBF1-213ENST00000485080 COG6Q9Y2V7 657 aa22.11■■□□□ 1.13
SREBF1-213ENST00000485080 C20orf194Q5TEA3 1177 aa22.1■■□□□ 1.13
SREBF1-213ENST00000485080 RSBN1LQ6PCB5 846 aaPredicted RBP22.1■■□□□ 1.13
SREBF1-213ENST00000485080 AGBL3Q8NEM8 1001 aa22.1■■□□□ 1.13
SREBF1-213ENST00000485080 FAM84BQ96KN1 310 aaPredicted RBP22.1■■□□□ 1.13
SREBF1-213ENST00000485080 CEP126Q9P2H0 1117 aa22.1■■□□□ 1.13
SREBF1-213ENST00000485080 EPS15P42566 896 aa22.09■■□□□ 1.13
SREBF1-213ENST00000485080 FBXO33Q7Z6M2 555 aa22.09■■□□□ 1.13
SREBF1-213ENST00000485080 GMLQ99445 158 aa22.09■■□□□ 1.13
SREBF1-213ENST00000485080 SIL1Q9H173 461 aa22.09■■□□□ 1.13
SREBF1-213ENST00000485080 MMP14P50281 582 aa22.08■■□□□ 1.13
SREBF1-213ENST00000485080 DACT2Q5SW24 774 aa22.08■■□□□ 1.13
SREBF1-213ENST00000485080 CEP85Q6P2H3 762 aa22.08■■□□□ 1.13
SREBF1-213ENST00000485080 USP50Q70EL3 339 aaPredicted RBP22.08■■□□□ 1.13
SREBF1-213ENST00000485080 LDHDQ86WU2 507 aa22.08■■□□□ 1.13
SREBF1-213ENST00000485080 SMC1BQ8NDV3 1235 aa22.08■■□□□ 1.13
SREBF1-213ENST00000485080 LPIN2Q92539 896 aa22.08■■□□□ 1.13
SREBF1-213ENST00000485080 C1orf115Q9H7X2 142 aa22.08■■□□□ 1.13
SREBF1-213ENST00000485080 ADARB2Q9NS39 739 aaKnown RBP22.08■■□□□ 1.13
SREBF1-213ENST00000485080 ZBTB22O15209 634 aa22.07■■□□□ 1.12
SREBF1-213ENST00000485080 HIBADHP31937 336 aaKnown RBP22.07■■□□□ 1.12
SREBF1-213ENST00000485080 RRP1P56182 461 aaKnown RBP22.07■■□□□ 1.12
SREBF1-213ENST00000485080 TDRD7Q8NHU6 1098 aaKnown RBP22.07■■□□□ 1.12
SREBF1-213ENST00000485080 CNOT7Q9UIV1 285 aaKnown RBP22.07■■□□□ 1.12
SREBF1-213ENST00000485080 NOP58Q9Y2X3 529 aaKnown RBP22.07■■□□□ 1.12
SREBF1-213ENST00000485080 ZBTB12Q9Y330 459 aaPredicted RBP22.07■■□□□ 1.12
SREBF1-213ENST00000485080 MYO3BQ8WXR4 1341 aa22.06■■□□□ 1.12
SREBF1-213ENST00000485080 SASH1O94885 1247 aa22.06■■□□□ 1.12
SREBF1-213ENST00000485080 IFIT1P09914 478 aaKnown RBP22.06■■□□□ 1.12
SREBF1-213ENST00000485080 TTLL5Q6EMB2 1281 aa22.06■■□□□ 1.12
SREBF1-213ENST00000485080 RPAP2Q8IXW5 612 aaPredicted RBP22.06■■□□□ 1.12
SREBF1-213ENST00000485080 ADAMTSL1Q8N6G6 1762 aa22.06■■□□□ 1.12
SREBF1-213ENST00000485080 ZNF646O15015 1829 aaPredicted RBP22.06■■□□□ 1.12
SREBF1-213ENST00000485080 H7C1D1 291 aa22.05■■□□□ 1.12
SREBF1-213ENST00000485080 ZNF280AP59817 542 aaPredicted RBP22.05■■□□□ 1.12
SREBF1-213ENST00000485080 FKBP1AP62942 108 aaKnown RBP22.05■■□□□ 1.12
SREBF1-213ENST00000485080 CAVIN4Q5BKX8 364 aa22.05■■□□□ 1.12
SREBF1-213ENST00000485080 FAM205AQ6ZU69 1335 aa22.05■■□□□ 1.12
SREBF1-213ENST00000485080 SLC5A1P13866 664 aa22.04■■□□□ 1.12
SREBF1-213ENST00000485080 GYG1P46976 350 aa22.04■■□□□ 1.12
SREBF1-213ENST00000485080 G3BP1Q13283 466 aaKnown RBP eCLIP22.04■■□□□ 1.12
SREBF1-213ENST00000485080 ATP2B3Q16720 1220 aa22.04■■□□□ 1.12
SREBF1-213ENST00000485080 CHADLQ6NUI6 762 aa22.04■■□□□ 1.12
SREBF1-213ENST00000485080 MICALL2Q8IY33 904 aa22.04■■□□□ 1.12
SREBF1-213ENST00000485080 POTEIP0CG38 1075 aa22.03■■□□□ 1.12
SREBF1-213ENST00000485080 POTEJP0CG39 1038 aa22.03■■□□□ 1.12
SREBF1-213ENST00000485080 ZC3H15Q8WU90 426 aaKnown RBP22.03■■□□□ 1.12
SREBF1-213ENST00000485080 PGAP2Q9UHJ9 254 aa22.03■■□□□ 1.12
SREBF1-213ENST00000485080 AKAP2Q9Y2D5 859 aa22.03■■□□□ 1.12
SREBF1-213ENST00000485080 GTF2IP78347 998 aa22.02■■□□□ 1.12
SREBF1-213ENST00000485080 USP17L8P0C7I0 530 aa22.01■■□□□ 1.11
SREBF1-213ENST00000485080 EAPPQ56P03 285 aaPredicted RBP22.01■■□□□ 1.11
SREBF1-213ENST00000485080 VPS37DQ86XT2 251 aa22.01■■□□□ 1.11
SREBF1-213ENST00000485080 GPR108Q9NPR9 543 aa22.01■■□□□ 1.11
SREBF1-213ENST00000485080 SHTN1A0MZ66 631 aa22■■□□□ 1.11
SREBF1-213ENST00000485080 BCAMP50895 628 aa22■■□□□ 1.11
SREBF1-213ENST00000485080 TFCP2Q12800 502 aa22■■□□□ 1.11
SREBF1-213ENST00000485080 CEP350Q5VT06 3117 aa22■■□□□ 1.11
SREBF1-213ENST00000485080 HMMRO75330 724 aa21.99■■□□□ 1.11
SREBF1-213ENST00000485080 SURF6O75683 361 aaKnown RBP21.99■■□□□ 1.11
SREBF1-213ENST00000485080 HIRAP54198 1017 aaPredicted RBP21.99■■□□□ 1.11
SREBF1-213ENST00000485080 SIRT2Q8IXJ6 389 aa21.99■■□□□ 1.11
SREBF1-213ENST00000485080 TRPM4Q8TD43 1214 aa21.99■■□□□ 1.11
SREBF1-213ENST00000485080 CERS5Q8N5B7 392 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms