RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 CELF1Q92879 486 aaKnown RBP16.9■□□□□ 0.3
CLK3-204ENST00000483723 MINPP1Q9UNW1 487 aa16.9■□□□□ 0.3
CLK3-204ENST00000483723 RBM8AQ9Y5S9 174 aaKnown RBP16.9■□□□□ 0.3
CLK3-204ENST00000483723 TNRC6CQ9HCJ0 1690 aaKnown RBP16.9■□□□□ 0.3
CLK3-204ENST00000483723 ZFYP08048 801 aaPredicted RBP16.9■□□□□ 0.3
CLK3-204ENST00000483723 MCM2P49736 904 aa16.9■□□□□ 0.3
CLK3-204ENST00000483723 NEK4P51957 841 aa16.9■□□□□ 0.3
CLK3-204ENST00000483723 UBE4AQ14139 1066 aa16.9■□□□□ 0.3
CLK3-204ENST00000483723 TM6SF1Q9BZW5 370 aa16.9■□□□□ 0.3
CLK3-204ENST00000483723 MYH7P12883 1935 aa16.89■□□□□ 0.3
CLK3-204ENST00000483723 TSGA10IPQ3SY00 556 aa16.89■□□□□ 0.29
CLK3-204ENST00000483723 PRR5LQ6MZQ0 368 aa16.89■□□□□ 0.29
CLK3-204ENST00000483723 SEC62Q99442 399 aaKnown RBP16.89■□□□□ 0.29
CLK3-204ENST00000483723 SNAP23O00161 211 aa16.88■□□□□ 0.29
CLK3-204ENST00000483723 TTF1Q15361 905 aaPredicted RBP16.88■□□□□ 0.29
CLK3-204ENST00000483723 ZNF827Q17R98 1081 aa16.88■□□□□ 0.29
CLK3-204ENST00000483723 CREB3L3Q68CJ9 461 aa16.88■□□□□ 0.29
CLK3-204ENST00000483723 CNBD1Q8NA66 436 aa16.88■□□□□ 0.29
CLK3-204ENST00000483723 SLKQ9H2G2 1235 aaPredicted RBP16.88■□□□□ 0.29
CLK3-204ENST00000483723 SERPINB2P05120 415 aa16.87■□□□□ 0.29
CLK3-204ENST00000483723 CYP2E1P05181 493 aaPredicted RBP16.87■□□□□ 0.29
CLK3-204ENST00000483723 PRPF40BQ6NWY9 871 aaKnown RBP16.87■□□□□ 0.29
CLK3-204ENST00000483723 CCDC24Q8N4L8 307 aa16.87■□□□□ 0.29
CLK3-204ENST00000483723 SLC27A2O14975 620 aa16.87■□□□□ 0.29
CLK3-204ENST00000483723 PI16Q6UXB8 463 aa16.87■□□□□ 0.29
CLK3-204ENST00000483723 FLAD1Q8NFF5 587 aa16.87■□□□□ 0.29
CLK3-204ENST00000483723 TTC14Q96N46 770 aa16.87■□□□□ 0.29
CLK3-204ENST00000483723 HMG20BQ9P0W2 317 aa16.87■□□□□ 0.29
CLK3-204ENST00000483723 ZBTB22O15209 634 aa16.86■□□□□ 0.29
CLK3-204ENST00000483723 SLFNL1Q499Z3 407 aa16.86■□□□□ 0.29
CLK3-204ENST00000483723 CCDC129Q6ZRS4 1044 aa16.86■□□□□ 0.29
CLK3-204ENST00000483723 SPRYD3Q8NCJ5 442 aa16.86■□□□□ 0.29
CLK3-204ENST00000483723 DSCC1Q9BVC3 393 aa16.86■□□□□ 0.29
CLK3-204ENST00000483723 CHMP5Q9NZZ3 219 aa16.86■□□□□ 0.29
CLK3-204ENST00000483723 ZNF804BA4D1E1 1349 aa16.86■□□□□ 0.29
CLK3-204ENST00000483723 MYO5AQ9Y4I1 1855 aaKnown RBP16.85■□□□□ 0.29
CLK3-204ENST00000483723 POLRMTO00411 1230 aaKnown RBP16.85■□□□□ 0.29
CLK3-204ENST00000483723 DDR1Q08345 913 aa16.85■□□□□ 0.29
CLK3-204ENST00000483723 CRY2Q49AN0 593 aa16.85■□□□□ 0.29
CLK3-204ENST00000483723 ZSCAN25Q6NSZ9 544 aa16.85■□□□□ 0.29
CLK3-204ENST00000483723 COL23A1Q86Y22 540 aaPredicted RBP16.85■□□□□ 0.29
CLK3-204ENST00000483723 OSBP2Q969R2 916 aa16.85■□□□□ 0.29
CLK3-204ENST00000483723 ANKRD2Q9GZV1 360 aa16.85■□□□□ 0.29
CLK3-204ENST00000483723 ZSWIM6Q9HCJ5 1215 aa16.85■□□□□ 0.29
CLK3-204ENST00000483723 CIZ1Q9ULV3 898 aaPredicted RBP16.85■□□□□ 0.29
CLK3-204ENST00000483723 U3KPZ7 1027 aaPredicted RBP16.85■□□□□ 0.29
CLK3-204ENST00000483723 DOCK2Q92608 1830 aa16.85■□□□□ 0.29
CLK3-204ENST00000483723 MAST3O60307 1309 aa16.85■□□□□ 0.29
CLK3-204ENST00000483723 KLRG2A4D1S0 409 aaPredicted RBP16.84■□□□□ 0.29
CLK3-204ENST00000483723 ZKSCAN1P17029 563 aaPredicted RBP16.84■□□□□ 0.29
CLK3-204ENST00000483723 RNF20Q5VTR2 975 aa16.84■□□□□ 0.29
CLK3-204ENST00000483723 SPATA5Q8NB90 893 aa16.84■□□□□ 0.29
CLK3-204ENST00000483723 APPBP2Q92624 585 aa16.84■□□□□ 0.29
CLK3-204ENST00000483723 PIH1D3Q9NQM4 214 aaKnown RBP16.84■□□□□ 0.29
CLK3-204ENST00000483723 TFCP2L1Q9NZI6 479 aa16.84■□□□□ 0.29
CLK3-204ENST00000483723 RPAP1Q9BWH6 1393 aaPredicted RBP16.84■□□□□ 0.29
CLK3-204ENST00000483723 ADD2P35612 726 aa16.84■□□□□ 0.29
CLK3-204ENST00000483723 KCNJ4P48050 445 aa16.84■□□□□ 0.29
CLK3-204ENST00000483723 BCAMP50895 628 aa16.84■□□□□ 0.29
CLK3-204ENST00000483723 GRAPQ13588 217 aa16.84■□□□□ 0.29
CLK3-204ENST00000483723 RASGRF1Q13972 1273 aa16.84■□□□□ 0.29
CLK3-204ENST00000483723 UBE3CQ15386 1083 aa16.84■□□□□ 0.29
CLK3-204ENST00000483723 ADCK5Q3MIX3 580 aa16.84■□□□□ 0.29
CLK3-204ENST00000483723 NLGN1Q8N2Q7 840 aa16.84■□□□□ 0.29
CLK3-204ENST00000483723 GRAPLQ8TC17 118 aaPredicted RBP16.84■□□□□ 0.29
CLK3-204ENST00000483723 UPF3BQ9BZI7 483 aaKnown RBP16.84■□□□□ 0.29
CLK3-204ENST00000483723 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.84■□□□□ 0.291e-6■■□□□ 12.7
CLK3-204ENST00000483723 NRXN2Q9P2S2 1712 aa16.84■□□□□ 0.29
CLK3-204ENST00000483723 M0R2C6 588 aa16.83■□□□□ 0.28
CLK3-204ENST00000483723 NPHP1O15259 732 aa16.83■□□□□ 0.28
CLK3-204ENST00000483723 ST5P78524 1137 aa16.83■□□□□ 0.28
CLK3-204ENST00000483723 CUL4AQ13619 759 aa16.83■□□□□ 0.28
CLK3-204ENST00000483723 HSPD1P10809 573 aaKnown RBP16.82■□□□□ 0.28
CLK3-204ENST00000483723 FBXO33Q7Z6M2 555 aa16.82■□□□□ 0.28
CLK3-204ENST00000483723 TMX3Q96JJ7 454 aa16.82■□□□□ 0.28
CLK3-204ENST00000483723 ALDH8A1Q9H2A2 487 aaPredicted RBP16.82■□□□□ 0.28
CLK3-204ENST00000483723 PSMA5P28066 241 aa16.82■□□□□ 0.28
CLK3-204ENST00000483723 HOXA10P31260 410 aaPredicted RBP16.82■□□□□ 0.28
CLK3-204ENST00000483723 FAM84BQ96KN1 310 aaPredicted RBP16.82■□□□□ 0.28
CLK3-204ENST00000483723 TCRBV5S4A2TA0A5A2 114 aa16.81■□□□□ 0.28
CLK3-204ENST00000483723 WTIPA6NIX2 430 aaPredicted RBP16.81■□□□□ 0.28
CLK3-204ENST00000483723 VPS53Q5VIR6 699 aa16.81■□□□□ 0.28
CLK3-204ENST00000483723 RUFY3Q7L099 469 aa16.81■□□□□ 0.28
CLK3-204ENST00000483723 JAKMIP1Q96N16 626 aaKnown RBP16.81■□□□□ 0.28
CLK3-204ENST00000483723 CAMKK2Q96RR4 588 aa16.81■□□□□ 0.28
CLK3-204ENST00000483723 PUS7LQ9H0K6 701 aaKnown RBP16.81■□□□□ 0.28
CLK3-204ENST00000483723 IRS2Q9Y4H2 1338 aa16.81■□□□□ 0.28
CLK3-204ENST00000483723 HSP90AA1P07900 732 aaKnown RBP16.8■□□□□ 0.28
CLK3-204ENST00000483723 CASTP20810 708 aaKnown RBP16.8■□□□□ 0.28
CLK3-204ENST00000483723 KRT32Q14532 448 aa16.8■□□□□ 0.28
CLK3-204ENST00000483723 NFKBIBQ15653 356 aa16.8■□□□□ 0.28
CLK3-204ENST00000483723 SLC9C2Q5TAH2 1124 aa16.8■□□□□ 0.28
CLK3-204ENST00000483723 CCDC125Q86Z20 511 aa16.8■□□□□ 0.28
CLK3-204ENST00000483723 CWC22Q9HCG8 908 aaKnown RBP16.8■□□□□ 0.28
CLK3-204ENST00000483723 GNL3LQ9NVN8 582 aaKnown RBP16.8■□□□□ 0.28
CLK3-204ENST00000483723 CYP46A1Q9Y6A2 500 aa16.8■□□□□ 0.28
CLK3-204ENST00000483723 PNPLA7Q6ZV29 1317 aa16.8■□□□□ 0.28
CLK3-204ENST00000483723 FOXP2O15409 715 aa16.79■□□□□ 0.28
CLK3-204ENST00000483723 CYP21A2P08686 494 aa16.79■□□□□ 0.28
CLK3-204ENST00000483723 PDE6AP16499 860 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms