RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 SUPT6HQ7KZ85 1726 aaKnown RBP10.06□□□□□ -0.8
CLK1-212ENST00000482590 IDH3AP50213 366 aa10.05□□□□□ -0.8
CLK1-212ENST00000482590 ZFATQ9P243 1243 aa10.05□□□□□ -0.8
CLK1-212ENST00000482590 MROH2AA6NES4 1674 aa10.04□□□□□ -0.8
CLK1-212ENST00000482590 ZBTB42B2RXF5 422 aa10.04□□□□□ -0.8
CLK1-212ENST00000482590 USP17L15C9J2P7 530 aa10.04□□□□□ -0.8
CLK1-212ENST00000482590 USP17L10C9JJH3 530 aa10.04□□□□□ -0.8
CLK1-212ENST00000482590 USP17L13C9JLJ4 530 aa10.04□□□□□ -0.8
CLK1-212ENST00000482590 USP17L12C9JPN9 530 aa10.04□□□□□ -0.8
CLK1-212ENST00000482590 USP17L11C9JVI0 530 aa10.04□□□□□ -0.8
CLK1-212ENST00000482590 USP17L21D6R901 530 aa10.04□□□□□ -0.8
CLK1-212ENST00000482590 USP17L18D6R9N7 530 aa10.04□□□□□ -0.8
CLK1-212ENST00000482590 USP17L22D6RA61 530 aa10.04□□□□□ -0.8
CLK1-212ENST00000482590 USP17L17D6RBQ6 530 aa10.04□□□□□ -0.8
CLK1-212ENST00000482590 USP17L19D6RCP7 530 aa10.04□□□□□ -0.8
CLK1-212ENST00000482590 USP17L20D6RJB6 530 aa10.04□□□□□ -0.8
CLK1-212ENST00000482590 MAP3K6O95382 1288 aa10.04□□□□□ -0.8
CLK1-212ENST00000482590 CPB1P15086 417 aa10.04□□□□□ -0.8
CLK1-212ENST00000482590 EPB42P16452 691 aa10.04□□□□□ -0.8
CLK1-212ENST00000482590 USP17L24Q0WX57 530 aa10.04□□□□□ -0.8
CLK1-212ENST00000482590 GRIK5Q16478 980 aa10.04□□□□□ -0.8
CLK1-212ENST00000482590 ANKMY2Q8IV38 441 aa10.04□□□□□ -0.8
CLK1-212ENST00000482590 LPIN3Q9BQK8 851 aa10.04□□□□□ -0.8
CLK1-212ENST00000482590 ZFP64Q9NPA5 681 aa10.04□□□□□ -0.8
CLK1-212ENST00000482590 USP21Q9UK80 565 aa10.04□□□□□ -0.8
CLK1-212ENST00000482590 SAMD9LQ8IVG5 1584 aa10.04□□□□□ -0.8
CLK1-212ENST00000482590 FAM196BA6NMK8 535 aa10.03□□□□□ -0.8
CLK1-212ENST00000482590 PLAURQ03405 335 aa10.03□□□□□ -0.8
CLK1-212ENST00000482590 MSL1Q68DK7 614 aa10.03□□□□□ -0.8
CLK1-212ENST00000482590 KRT25Q7Z3Z0 450 aa10.03□□□□□ -0.8
CLK1-212ENST00000482590 FBXO41Q8TF61 875 aa10.03□□□□□ -0.8
CLK1-212ENST00000482590 TP53INP1Q96A56 240 aa10.03□□□□□ -0.8
CLK1-212ENST00000482590 SSBP4Q9BWG4 385 aaPredicted RBP10.03□□□□□ -0.8
CLK1-212ENST00000482590 QTRT2Q9H974 415 aaKnown RBP10.03□□□□□ -0.8
CLK1-212ENST00000482590 MLH3Q9UHC1 1453 aa10.03□□□□□ -0.8
CLK1-212ENST00000482590 SYCP2Q9BX26 1530 aa10.02□□□□□ -0.8
CLK1-212ENST00000482590 STRCQ7RTU9 1775 aa10.02□□□□□ -0.81
CLK1-212ENST00000482590 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.02□□□□□ -0.81
CLK1-212ENST00000482590 DGKZQ13574 1117 aa10.02□□□□□ -0.81
CLK1-212ENST00000482590 PCSK7Q16549 785 aa10.02□□□□□ -0.81
CLK1-212ENST00000482590 PERM1Q5SV97 790 aa10.02□□□□□ -0.81
CLK1-212ENST00000482590 DHX32Q7L7V1 743 aaKnown RBP10.02□□□□□ -0.81
CLK1-212ENST00000482590 TRPM4Q8TD43 1214 aa10.02□□□□□ -0.81
CLK1-212ENST00000482590 IFT43Q96FT9 208 aa10.02□□□□□ -0.81
CLK1-212ENST00000482590 CALR3Q96L12 384 aaKnown RBP10.02□□□□□ -0.81
CLK1-212ENST00000482590 KRTAP9-2Q9BYQ4 174 aa10.02□□□□□ -0.81
CLK1-212ENST00000482590 FRRS1LQ9P0K9 344 aa10.02□□□□□ -0.81
CLK1-212ENST00000482590 AGLP35573 1532 aa10.02□□□□□ -0.81
CLK1-212ENST00000482590 UHRF1BP1Q6BDS2 1440 aa10.01□□□□□ -0.81
CLK1-212ENST00000482590 TARSP26639 723 aaKnown RBP10.01□□□□□ -0.81
CLK1-212ENST00000482590 ARSDP51689 593 aa10.01□□□□□ -0.81
CLK1-212ENST00000482590 HSPA2P54652 639 aa10.01□□□□□ -0.81
CLK1-212ENST00000482590 VRTNQ9H8Y1 702 aa10.01□□□□□ -0.81
CLK1-212ENST00000482590 ADGBQ8N7X0 1667 aa10.01□□□□□ -0.81
CLK1-212ENST00000482590 INO80Q9ULG1 1556 aaPredicted RBP10.01□□□□□ -0.81
CLK1-212ENST00000482590 CLTCQ00610 1675 aaKnown RBP10□□□□□ -0.81
CLK1-212ENST00000482590 MICAL2O94851 1124 aa10□□□□□ -0.81
CLK1-212ENST00000482590 WEE1P30291 646 aa10□□□□□ -0.81
CLK1-212ENST00000482590 MLLT1Q03111 559 aaPredicted RBP10□□□□□ -0.81
CLK1-212ENST00000482590 FBXO11Q86XK2 927 aa10□□□□□ -0.81
CLK1-212ENST00000482590 DTWD1Q8N5C7 304 aa10□□□□□ -0.81
CLK1-212ENST00000482590 ATP7AQ04656 1500 aa9.99□□□□□ -0.81
CLK1-212ENST00000482590 EHBP1L1Q8N3D4 1523 aa9.99□□□□□ -0.81
CLK1-212ENST00000482590 SASH3O75995 380 aa9.99□□□□□ -0.81
CLK1-212ENST00000482590 LMOD1P29536 600 aaPredicted RBP9.99□□□□□ -0.81
CLK1-212ENST00000482590 AFAP1Q8N556 730 aa9.99□□□□□ -0.81
CLK1-212ENST00000482590 C11orf16Q9NQ32 467 aa9.99□□□□□ -0.81
CLK1-212ENST00000482590 TRAPPC8Q9Y2L5 1435 aa9.99□□□□□ -0.81
CLK1-212ENST00000482590 EIF5BO60841 1220 aaKnown RBP9.98□□□□□ -0.81
CLK1-212ENST00000482590 RARAP10276 462 aa9.98□□□□□ -0.81
CLK1-212ENST00000482590 GPLD1P80108 840 aa9.98□□□□□ -0.81
CLK1-212ENST00000482590 ELMSAN1Q6PJG2 1045 aa9.98□□□□□ -0.81
CLK1-212ENST00000482590 TTC9Q92623 222 aa9.98□□□□□ -0.81
CLK1-212ENST00000482590 ZNF142P52746 1687 aaPredicted RBP9.98□□□□□ -0.81
CLK1-212ENST00000482590 TIAM1Q13009 1591 aa9.97□□□□□ -0.81
CLK1-212ENST00000482590 MYO3AQ8NEV4 1616 aa9.97□□□□□ -0.81
CLK1-212ENST00000482590 OPLAHO14841 1288 aa9.97□□□□□ -0.81
CLK1-212ENST00000482590 FOXO3O43524 673 aa9.97□□□□□ -0.81
CLK1-212ENST00000482590 C11orf91Q3C1V1 193 aa9.97□□□□□ -0.81
CLK1-212ENST00000482590 WFDC12Q8WWY7 111 aa9.97□□□□□ -0.81
CLK1-212ENST00000482590 MYO19Q96H55 970 aa9.97□□□□□ -0.81
CLK1-212ENST00000482590 PLEKHH2Q8IVE3 1493 aa9.97□□□□□ -0.81
CLK1-212ENST00000482590 PLXNC1O60486 1568 aa9.97□□□□□ -0.81
CLK1-212ENST00000482590 KRTAP9-6A0A140TA67 174 aa9.96□□□□□ -0.82
CLK1-212ENST00000482590 LRP8Q14114 963 aa9.96□□□□□ -0.82
CLK1-212ENST00000482590 WFDC8Q8IUA0 241 aa9.96□□□□□ -0.82
CLK1-212ENST00000482590 USP20Q9Y2K6 914 aa9.96□□□□□ -0.82
CLK1-212ENST00000482590 CNTLNQ9NXG0 1405 aa9.96□□□□□ -0.82
CLK1-212ENST00000482590 DEAF1O75398 565 aaPredicted RBP9.95□□□□□ -0.82
CLK1-212ENST00000482590 NOS3P29474 1203 aa9.95□□□□□ -0.82
CLK1-212ENST00000482590 IREB2P48200 963 aaKnown RBP9.95□□□□□ -0.82
CLK1-212ENST00000482590 HFE2Q6ZVN8 426 aa9.95□□□□□ -0.82
CLK1-212ENST00000482590 SMG9Q9H0W8 520 aaKnown RBP9.95□□□□□ -0.82
CLK1-212ENST00000482590 LRFN2Q9ULH4 789 aa9.95□□□□□ -0.82
CLK1-212ENST00000482590 GPATCH8Q9UKJ3 1502 aaKnown RBP9.95□□□□□ -0.82
CLK1-212ENST00000482590 MTUS2Q5JR59 1369 aa9.94□□□□□ -0.82
CLK1-212ENST00000482590 A6NJR5 290 aa9.94□□□□□ -0.82
CLK1-212ENST00000482590 CEBPAP49715 358 aaPredicted RBP9.94□□□□□ -0.82
CLK1-212ENST00000482590 NBPF11Q86T75 865 aa9.94□□□□□ -0.82
CLK1-212ENST00000482590 VTI1AQ96AJ9 217 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms