RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 GDF2Q9UK05 429 aaPredicted RBP9.59□□□□□ -0.87
SF3B1-210ENST00000482158 WFS1O76024 890 aa9.58□□□□□ -0.88
SF3B1-210ENST00000482158 EIF2AK2P19525 551 aaKnown RBP9.58□□□□□ -0.88
SF3B1-210ENST00000482158 PRPF40BQ6NWY9 871 aaKnown RBP9.58□□□□□ -0.88
SF3B1-210ENST00000482158 NXPE3Q969Y0 559 aa9.58□□□□□ -0.88
SF3B1-210ENST00000482158 SPACA7Q96KW9 195 aa9.58□□□□□ -0.88
SF3B1-210ENST00000482158 ABCB6Q9NP58 842 aa9.58□□□□□ -0.88
SF3B1-210ENST00000482158 GHRHP01286 108 aa9.57□□□□□ -0.88
SF3B1-210ENST00000482158 GRIA4P48058 902 aa9.57□□□□□ -0.88
SF3B1-210ENST00000482158 TSNAXIP1Q2TAA8 658 aa9.57□□□□□ -0.88
SF3B1-210ENST00000482158 TMEM102Q8N9M5 508 aaPredicted RBP9.57□□□□□ -0.88
SF3B1-210ENST00000482158 C3orf58Q8NDZ4 430 aa9.57□□□□□ -0.88
SF3B1-210ENST00000482158 SRCIN1Q9C0H9 1055 aa9.57□□□□□ -0.88
SF3B1-210ENST00000482158 BHLHE41Q9C0J9 482 aaPredicted RBP9.57□□□□□ -0.88
SF3B1-210ENST00000482158 FAM8A1Q9UBU6 413 aa9.57□□□□□ -0.88
SF3B1-210ENST00000482158 METTL12A8MUP2 240 aa9.56□□□□□ -0.88
SF3B1-210ENST00000482158 USP17L7P0C7H9 530 aa9.56□□□□□ -0.88
SF3B1-210ENST00000482158 PLD4Q96BZ4 506 aa9.56□□□□□ -0.88
SF3B1-210ENST00000482158 POP1Q99575 1024 aaKnown RBP9.56□□□□□ -0.88
SF3B1-210ENST00000482158 TMEM238LA0A1B0GVL6 79 aa9.55□□□□□ -0.88
SF3B1-210ENST00000482158 PDE2AO00408 941 aaPredicted RBP9.55□□□□□ -0.88
SF3B1-210ENST00000482158 TREML4Q6UXN2 200 aa9.55□□□□□ -0.88
SF3B1-210ENST00000482158 C20orf204Q6ZNR8 217 aa9.55□□□□□ -0.88
SF3B1-210ENST00000482158 SMG9Q9H0W8 520 aaKnown RBP9.55□□□□□ -0.88
SF3B1-210ENST00000482158 FRRS1LQ9P0K9 344 aa9.55□□□□□ -0.88
SF3B1-210ENST00000482158 TRAK1Q9UPV9 953 aa9.55□□□□□ -0.88
SF3B1-210ENST00000482158 SHISA8B8ZZ34 492 aa9.54□□□□□ -0.88
SF3B1-210ENST00000482158 OIP5O43482 229 aa9.54□□□□□ -0.88
SF3B1-210ENST00000482158 SPRED3Q2MJR0 410 aa9.54□□□□□ -0.88
SF3B1-210ENST00000482158 CEP135Q66GS9 1140 aa9.54□□□□□ -0.88
SF3B1-210ENST00000482158 PSAPL1Q6NUJ1 521 aa9.54□□□□□ -0.88
SF3B1-210ENST00000482158 LYPD4Q6UWN0 246 aa9.54□□□□□ -0.88
SF3B1-210ENST00000482158 WHAMMQ8TF30 809 aa9.54□□□□□ -0.88
SF3B1-210ENST00000482158 CRELD1Q96HD1 420 aa9.54□□□□□ -0.88
SF3B1-210ENST00000482158 FCGRTP55899 365 aa9.53□□□□□ -0.88
SF3B1-210ENST00000482158 GRIK5Q16478 980 aa9.53□□□□□ -0.88
SF3B1-210ENST00000482158 MEI1Q5TIA1 1274 aa9.53□□□□□ -0.88
SF3B1-210ENST00000482158 ELMSAN1Q6PJG2 1045 aa9.53□□□□□ -0.88
SF3B1-210ENST00000482158 GALNT6Q8NCL4 622 aa9.53□□□□□ -0.88
SF3B1-210ENST00000482158 EDARADDQ8WWZ3 215 aa9.53□□□□□ -0.88
SF3B1-210ENST00000482158 TTC9Q92623 222 aa9.53□□□□□ -0.88
SF3B1-210ENST00000482158 BCL11AQ9H165 835 aa9.53□□□□□ -0.88
SF3B1-210ENST00000482158 RBSNQ9H1K0 784 aa9.53□□□□□ -0.88
SF3B1-210ENST00000482158 TRIM33Q9UPN9 1127 aa9.53□□□□□ -0.88
SF3B1-210ENST00000482158 USP31Q70CQ4 1352 aa9.52□□□□□ -0.88
SF3B1-210ENST00000482158 ALBP02768 609 aa9.52□□□□□ -0.89
SF3B1-210ENST00000482158 CELA2BP08218 269 aaPredicted RBP9.52□□□□□ -0.89
SF3B1-210ENST00000482158 ALAS2P22557 587 aa9.52□□□□□ -0.89
SF3B1-210ENST00000482158 ITPKAP23677 461 aa9.52□□□□□ -0.89
SF3B1-210ENST00000482158 TMEM87AQ8NBN3 555 aa9.52□□□□□ -0.89
SF3B1-210ENST00000482158 NUDT8Q8WV74 236 aa9.52□□□□□ -0.89
SF3B1-210ENST00000482158 SMNDC1O75940 238 aaKnown RBP eCLIP9.51□□□□□ -0.89
SF3B1-210ENST00000482158 BCRP11274 1271 aa9.51□□□□□ -0.89
SF3B1-210ENST00000482158 TCF3P15923 654 aa9.51□□□□□ -0.89
SF3B1-210ENST00000482158 GSTT1P30711 240 aa9.51□□□□□ -0.89
SF3B1-210ENST00000482158 ITGAEP38570 1179 aa9.51□□□□□ -0.89
SF3B1-210ENST00000482158 BTBD6Q96KE9 485 aa9.51□□□□□ -0.89
SF3B1-210ENST00000482158 MUC3BQ9H195 1237 aa9.51□□□□□ -0.89
SF3B1-210ENST00000482158 LRRC4BQ9NT99 713 aa9.51□□□□□ -0.89
SF3B1-210ENST00000482158 A0A096LPE4 126 aa9.5□□□□□ -0.89
SF3B1-210ENST00000482158 A0A1W2PPZ6 126 aa9.5□□□□□ -0.89
SF3B1-210ENST00000482158 FANCCQ00597 558 aa9.5□□□□□ -0.89
SF3B1-210ENST00000482158 C8orf86Q6ZUL3 223 aa9.5□□□□□ -0.89
SF3B1-210ENST00000482158 CHSY3Q70JA7 882 aa9.5□□□□□ -0.89
SF3B1-210ENST00000482158 MICALL1Q8N3F8 863 aa9.5□□□□□ -0.89
SF3B1-210ENST00000482158 ASAP3Q8TDY4 903 aa9.5□□□□□ -0.89
SF3B1-210ENST00000482158 ADAM19Q9H013 955 aa9.5□□□□□ -0.89
SF3B1-210ENST00000482158 PPP4R2Q9NY27 417 aa9.5□□□□□ -0.89
SF3B1-210ENST00000482158 SCAMP3O14828 347 aaKnown RBP9.49□□□□□ -0.89
SF3B1-210ENST00000482158 RGS9O75916 674 aaPredicted RBP9.49□□□□□ -0.89
SF3B1-210ENST00000482158 HOXB4P17483 251 aaPredicted RBP9.49□□□□□ -0.89
SF3B1-210ENST00000482158 HDLBPQ00341 1268 aaKnown RBP9.49□□□□□ -0.89
SF3B1-210ENST00000482158 MAP3K10Q02779 954 aa9.49□□□□□ -0.89
SF3B1-210ENST00000482158 PTPN12Q05209 780 aaKnown RBP9.49□□□□□ -0.89
SF3B1-210ENST00000482158 ZNF576Q9H609 170 aa9.49□□□□□ -0.89
SF3B1-210ENST00000482158 SOX13Q9UN79 622 aa9.49□□□□□ -0.89
SF3B1-210ENST00000482158 XRCC5P13010 732 aaKnown RBP9.48□□□□□ -0.89
SF3B1-210ENST00000482158 BAG6P46379 1132 aa9.48□□□□□ -0.89
SF3B1-210ENST00000482158 AFF1P51825 1210 aaKnown RBP9.48□□□□□ -0.89
SF3B1-210ENST00000482158 COL9A3Q14050 684 aaPredicted RBP9.48□□□□□ -0.89
SF3B1-210ENST00000482158 TAF1CQ15572 869 aaPredicted RBP9.48□□□□□ -0.89
SF3B1-210ENST00000482158 ZNF385CQ66K41 422 aaPredicted RBP9.48□□□□□ -0.89
SF3B1-210ENST00000482158 DTHD1Q6ZMT9 781 aa9.48□□□□□ -0.89
SF3B1-210ENST00000482158 VN1R5Q7Z5H4 357 aa9.48□□□□□ -0.89
SF3B1-210ENST00000482158 METTL16Q86W50 562 aaKnown RBP9.48□□□□□ -0.89
SF3B1-210ENST00000482158 ANKRD24Q8TF21 1146 aa9.48□□□□□ -0.89
SF3B1-210ENST00000482158 BSNDQ8WZ55 320 aa9.48□□□□□ -0.89
SF3B1-210ENST00000482158 LACRTQ9GZZ8 138 aa9.48□□□□□ -0.89
SF3B1-210ENST00000482158 JPH1Q9HDC5 661 aaPredicted RBP9.48□□□□□ -0.89
SF3B1-210ENST00000482158 SH2B1Q9NRF2 756 aaPredicted RBP9.48□□□□□ -0.89
SF3B1-210ENST00000482158 M0R082 166 aa9.47□□□□□ -0.89
SF3B1-210ENST00000482158 ST13P50502 369 aaKnown RBP9.47□□□□□ -0.89
SF3B1-210ENST00000482158 FAAP100Q0VG06 881 aa9.47□□□□□ -0.89
SF3B1-210ENST00000482158 KANK3Q6NY19 840 aa9.47□□□□□ -0.89
SF3B1-210ENST00000482158 ILDR2Q71H61 639 aa9.47□□□□□ -0.89
SF3B1-210ENST00000482158 ZNF417Q8TAU3 575 aa9.47□□□□□ -0.89
SF3B1-210ENST00000482158 ZNF587Q96SQ5 575 aaPredicted RBP9.47□□□□□ -0.89
SF3B1-210ENST00000482158 AKAP2Q9Y2D5 859 aa9.47□□□□□ -0.89
SF3B1-210ENST00000482158 PTPRAP18433 802 aa9.46□□□□□ -0.9
SF3B1-210ENST00000482158 RANGAP1P46060 587 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms