RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 ZNF804AQ7Z570 1209 aa6.31□□□□□ -1.4
HDAC6-223ENST00000480525 PNMA8AQ86V59 439 aaPredicted RBP6.31□□□□□ -1.4
HDAC6-223ENST00000480525 ZC3H15Q8WU90 426 aaKnown RBP6.31□□□□□ -1.4
HDAC6-223ENST00000480525 TBC1D22AQ8WUA7 517 aa6.31□□□□□ -1.4
HDAC6-223ENST00000480525 CLUAP1Q96AJ1 413 aa6.31□□□□□ -1.4
HDAC6-223ENST00000480525 CNNM1Q9NRU3 951 aa6.31□□□□□ -1.4
HDAC6-223ENST00000480525 LAMB1P07942 1786 aa6.31□□□□□ -1.4
HDAC6-223ENST00000480525 IFIT1P09914 478 aaKnown RBP6.3□□□□□ -1.4
HDAC6-223ENST00000480525 VEGFAP15692 232 aaPredicted RBP6.3□□□□□ -1.4
HDAC6-223ENST00000480525 HDLBPQ00341 1268 aaKnown RBP6.3□□□□□ -1.4
HDAC6-223ENST00000480525 RASSF7Q02833 373 aa6.3□□□□□ -1.4
HDAC6-223ENST00000480525 HDAC1Q13547 482 aaPredicted RBP6.3□□□□□ -1.4
HDAC6-223ENST00000480525 CAVIN4Q5BKX8 364 aa6.3□□□□□ -1.4
HDAC6-223ENST00000480525 ERICH6BQ5W0A0 696 aa6.3□□□□□ -1.4
HDAC6-223ENST00000480525 USP50Q70EL3 339 aaPredicted RBP6.3□□□□□ -1.4
HDAC6-223ENST00000480525 FBXO33Q7Z6M2 555 aa6.3□□□□□ -1.4
HDAC6-223ENST00000480525 PELP1Q8IZL8 1130 aaKnown RBP6.3□□□□□ -1.4
HDAC6-223ENST00000480525 ZNF784Q8NCA9 323 aaPredicted RBP6.3□□□□□ -1.4
HDAC6-223ENST00000480525 MTMR14Q8NCE2 650 aa6.3□□□□□ -1.4
HDAC6-223ENST00000480525 TDRD7Q8NHU6 1098 aaKnown RBP6.3□□□□□ -1.4
HDAC6-223ENST00000480525 PANK1Q8TE04 598 aa6.3□□□□□ -1.4
HDAC6-223ENST00000480525 GMLQ99445 158 aa6.3□□□□□ -1.4
HDAC6-223ENST00000480525 ZNF277Q9NRM2 450 aaPredicted RBP6.3□□□□□ -1.4
HDAC6-223ENST00000480525 CEP126Q9P2H0 1117 aa6.3□□□□□ -1.4
HDAC6-223ENST00000480525 PGAP2Q9UHJ9 254 aa6.3□□□□□ -1.4
HDAC6-223ENST00000480525 MYH7P12883 1935 aa6.3□□□□□ -1.4
HDAC6-223ENST00000480525 MAST3O60307 1309 aa6.29□□□□□ -1.4
HDAC6-223ENST00000480525 PITPNM2Q9BZ72 1349 aa6.29□□□□□ -1.4
HDAC6-223ENST00000480525 PNMA6EA0A0J9YXQ4 647 aa6.29□□□□□ -1.4
HDAC6-223ENST00000480525 C6orf229H3BNL8 230 aa6.29□□□□□ -1.4
HDAC6-223ENST00000480525 ECE2O60344 883 aa6.29□□□□□ -1.4
HDAC6-223ENST00000480525 TOMM70O94826 608 aa6.29□□□□□ -1.4
HDAC6-223ENST00000480525 MAP4K4O95819 1239 aaPredicted RBP6.29□□□□□ -1.4
HDAC6-223ENST00000480525 SLC5A1P13866 664 aa6.29□□□□□ -1.4
HDAC6-223ENST00000480525 ZNF280AP59817 542 aaPredicted RBP6.29□□□□□ -1.4
HDAC6-223ENST00000480525 CXCL9Q07325 125 aa6.29□□□□□ -1.4
HDAC6-223ENST00000480525 FSTL1Q12841 308 aa6.29□□□□□ -1.4
HDAC6-223ENST00000480525 AOC3Q16853 763 aa6.29□□□□□ -1.4
HDAC6-223ENST00000480525 METTL24Q5JXM2 366 aa6.29□□□□□ -1.4
HDAC6-223ENST00000480525 CIAPIN1Q6FI81 312 aa6.29□□□□□ -1.4
HDAC6-223ENST00000480525 ZGPATQ8N5A5 531 aaKnown RBP6.29□□□□□ -1.4
HDAC6-223ENST00000480525 RBM46Q8TBY0 533 aaKnown RBP6.29□□□□□ -1.4
HDAC6-223ENST00000480525 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.29□□□□□ -1.4
HDAC6-223ENST00000480525 GCC1Q96CN9 775 aa6.29□□□□□ -1.4
HDAC6-223ENST00000480525 KIF1BPQ96EK5 621 aa6.29□□□□□ -1.4
HDAC6-223ENST00000480525 FAM84BQ96KN1 310 aaPredicted RBP6.29□□□□□ -1.4
HDAC6-223ENST00000480525 DCTPP1Q9H773 170 aa6.29□□□□□ -1.4
HDAC6-223ENST00000480525 CD209Q9NNX6 404 aa6.29□□□□□ -1.4
HDAC6-223ENST00000480525 GPRC5DQ9NZD1 345 aa6.29□□□□□ -1.4
HDAC6-223ENST00000480525 TNNQ9UQP3 1299 aa6.29□□□□□ -1.4
HDAC6-223ENST00000480525 COG6Q9Y2V7 657 aa6.29□□□□□ -1.4
HDAC6-223ENST00000480525 CHMP3Q9Y3E7 222 aa6.29□□□□□ -1.4
HDAC6-223ENST00000480525 POLR2AP24928 1970 aaKnown RBP6.29□□□□□ -1.4
HDAC6-223ENST00000480525 FOCADQ5VW36 1801 aa6.29□□□□□ -1.4
HDAC6-223ENST00000480525 USP17L3A6NCW0 530 aa6.28□□□□□ -1.4
HDAC6-223ENST00000480525 USP17L4A6NCW7 530 aa6.28□□□□□ -1.4
HDAC6-223ENST00000480525 YDJCA8MPS7 323 aa6.28□□□□□ -1.4
HDAC6-223ENST00000480525 ARID4AP29374 1257 aaPredicted RBP6.28□□□□□ -1.4
HDAC6-223ENST00000480525 HIBADHP31937 336 aaKnown RBP6.28□□□□□ -1.4
HDAC6-223ENST00000480525 KCNJ4P48050 445 aa6.28□□□□□ -1.4
HDAC6-223ENST00000480525 SCNN1DP51172 638 aa6.28□□□□□ -1.4
HDAC6-223ENST00000480525 G3BP1Q13283 466 aaKnown RBP eCLIP6.28□□□□□ -1.4
HDAC6-223ENST00000480525 ATP2B3Q16720 1220 aa6.28□□□□□ -1.4
HDAC6-223ENST00000480525 LRRC24Q50LG9 513 aa6.28□□□□□ -1.4
HDAC6-223ENST00000480525 DACT2Q5SW24 774 aa6.28□□□□□ -1.4
HDAC6-223ENST00000480525 RSBN1LQ6PCB5 846 aaPredicted RBP6.28□□□□□ -1.4
HDAC6-223ENST00000480525 OLFM4Q6UX06 510 aa6.28□□□□□ -1.4
HDAC6-223ENST00000480525 USP17L1Q7RTZ2 530 aa6.28□□□□□ -1.4
HDAC6-223ENST00000480525 CERS3Q8IU89 383 aa6.28□□□□□ -1.4
HDAC6-223ENST00000480525 SIRT2Q8IXJ6 389 aa6.28□□□□□ -1.4
HDAC6-223ENST00000480525 WDR66Q8TBY9 1149 aa6.28□□□□□ -1.4
HDAC6-223ENST00000480525 JARID2Q92833 1246 aaPredicted RBP6.28□□□□□ -1.4
HDAC6-223ENST00000480525 PUS3Q9BZE2 481 aaKnown RBP6.28□□□□□ -1.4
HDAC6-223ENST00000480525 GPBP1L1Q9HC44 474 aaPredicted RBP6.28□□□□□ -1.4
HDAC6-223ENST00000480525 ADARB2Q9NS39 739 aaKnown RBP6.28□□□□□ -1.4
HDAC6-223ENST00000480525 GNL3LQ9NVN8 582 aaKnown RBP6.28□□□□□ -1.4
HDAC6-223ENST00000480525 TAOK2Q9UL54 1235 aa6.28□□□□□ -1.4
HDAC6-223ENST00000480525 MYH2Q9UKX2 1941 aa6.28□□□□□ -1.4
HDAC6-223ENST00000480525 ZNF541Q9H0D2 1346 aa6.27□□□□□ -1.41
HDAC6-223ENST00000480525 A0A1B0GUL7 405 aa6.27□□□□□ -1.41
HDAC6-223ENST00000480525 UNCXA6NJT0 531 aa6.27□□□□□ -1.41
HDAC6-223ENST00000480525 POTECB2RU33 542 aa6.27□□□□□ -1.41
HDAC6-223ENST00000480525 KIF3CO14782 793 aa6.27□□□□□ -1.41
HDAC6-223ENST00000480525 UQCRFS1P1P0C7P4 283 aa6.27□□□□□ -1.41
HDAC6-223ENST00000480525 LMOD1P29536 600 aaPredicted RBP6.27□□□□□ -1.41
HDAC6-223ENST00000480525 FKBP1CQ5VVH2 108 aa6.27□□□□□ -1.41
HDAC6-223ENST00000480525 LDHDQ86WU2 507 aa6.27□□□□□ -1.41
HDAC6-223ENST00000480525 FAM163AQ96GL9 167 aaPredicted RBP6.27□□□□□ -1.41
HDAC6-223ENST00000480525 ZNF594Q96JF6 807 aaPredicted RBP6.27□□□□□ -1.41
HDAC6-223ENST00000480525 HACL1Q9UJ83 578 aa6.27□□□□□ -1.41
HDAC6-223ENST00000480525 SERPINA10Q9UK55 444 aa6.27□□□□□ -1.41
HDAC6-223ENST00000480525 DENND2AQ9ULE3 1009 aa6.27□□□□□ -1.41
HDAC6-223ENST00000480525 COL2A1P02458 1487 aaPredicted RBP6.27□□□□□ -1.41
HDAC6-223ENST00000480525 PLIN1O60240 522 aa6.26□□□□□ -1.41
HDAC6-223ENST00000480525 NPM3O75607 178 aaKnown RBP6.26□□□□□ -1.41
HDAC6-223ENST00000480525 SURF6O75683 361 aaKnown RBP6.26□□□□□ -1.41
HDAC6-223ENST00000480525 USP17L8P0C7I0 530 aa6.26□□□□□ -1.41
HDAC6-223ENST00000480525 TNNI3KQ59H18 835 aa6.26□□□□□ -1.41
HDAC6-223ENST00000480525 C20orf194Q5TEA3 1177 aa6.26□□□□□ -1.41
HDAC6-223ENST00000480525 TTLL5Q6EMB2 1281 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms