RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 ZC3H12CQ9C0D7 883 aaKnown RBP8.61□□□□□ -1.03
VCP-205ENST00000479300 MYOZ2Q9NPC6 264 aa8.61□□□□□ -1.03
VCP-205ENST00000479300 TRIM35Q9UPQ4 493 aa8.61□□□□□ -1.03
VCP-205ENST00000479300 PITPNM2Q9BZ72 1349 aa8.6□□□□□ -1.03
VCP-205ENST00000479300 USP17L8P0C7I0 530 aa8.6□□□□□ -1.03
VCP-205ENST00000479300 MKRN3Q13064 507 aaKnown RBP8.6□□□□□ -1.03
VCP-205ENST00000479300 PKN2Q16513 984 aaKnown RBP8.6□□□□□ -1.03
VCP-205ENST00000479300 HDGFL1Q5TGJ6 251 aa8.6□□□□□ -1.03
VCP-205ENST00000479300 REM2Q8IYK8 340 aaPredicted RBP8.6□□□□□ -1.03
VCP-205ENST00000479300 GGA1Q9UJY5 639 aa8.6□□□□□ -1.03
VCP-205ENST00000479300 CENPFP49454 3210 aa8.6□□□□□ -1.03
VCP-205ENST00000479300 POTEFA5A3E0 1075 aa8.59□□□□□ -1.03
VCP-205ENST00000479300 CAP1Q01518 475 aa8.59□□□□□ -1.03
VCP-205ENST00000479300 PTPN12Q05209 780 aaKnown RBP8.59□□□□□ -1.03
VCP-205ENST00000479300 CALD1Q05682 793 aaKnown RBP8.59□□□□□ -1.03
VCP-205ENST00000479300 NOM1Q5C9Z4 860 aaKnown RBP8.59□□□□□ -1.03
VCP-205ENST00000479300 DACT2Q5SW24 774 aa8.59□□□□□ -1.03
VCP-205ENST00000479300 FBXO46Q6PJ61 603 aaPredicted RBP8.59□□□□□ -1.03
VCP-205ENST00000479300 ZBTB38Q8NAP3 1195 aaPredicted RBP8.59□□□□□ -1.03
VCP-205ENST00000479300 YTHDC1Q96MU7 727 aaKnown RBP8.59□□□□□ -1.03
VCP-205ENST00000479300 CCDC85AQ96PX6 553 aaPredicted RBP8.59□□□□□ -1.03
VCP-205ENST00000479300 CFHR5Q9BXR6 569 aa8.59□□□□□ -1.03
VCP-205ENST00000479300 ANKIB1Q9P2G1 1089 aa8.59□□□□□ -1.03
VCP-205ENST00000479300 HDAC9Q9UKV0 1011 aa8.59□□□□□ -1.03
VCP-205ENST00000479300 FZD1Q9UP38 647 aa8.59□□□□□ -1.03
VCP-205ENST00000479300 BRCA2P51587 3418 aa8.59□□□□□ -1.03
VCP-205ENST00000479300 SSC5DA1L4H1 1573 aa8.58□□□□□ -1.04
VCP-205ENST00000479300 USP17L3A6NCW0 530 aa8.58□□□□□ -1.04
VCP-205ENST00000479300 USP17L4A6NCW7 530 aa8.58□□□□□ -1.04
VCP-205ENST00000479300 WNT10BO00744 389 aa8.58□□□□□ -1.04
VCP-205ENST00000479300 HABP4Q5JVS0 413 aaKnown RBP8.58□□□□□ -1.04
VCP-205ENST00000479300 USP17L1Q7RTZ2 530 aa8.58□□□□□ -1.04
VCP-205ENST00000479300 TXNRD3Q86VQ6 643 aa8.58□□□□□ -1.04
VCP-205ENST00000479300 MIER1Q8N108 512 aa8.58□□□□□ -1.04
VCP-205ENST00000479300 PHAXQ9H814 394 aaKnown RBP8.58□□□□□ -1.04
VCP-205ENST00000479300 PRKRIP1Q9H875 184 aaPredicted RBP8.58□□□□□ -1.04
VCP-205ENST00000479300 DBF4Q9UBU7 674 aaPredicted RBP8.58□□□□□ -1.04
VCP-205ENST00000479300 SSUH2Q9Y2M2 353 aa8.58□□□□□ -1.04
VCP-205ENST00000479300 SPEF2Q9C093 1822 aa8.58□□□□□ -1.04
VCP-205ENST00000479300 XDHP47989 1333 aa8.57□□□□□ -1.04
VCP-205ENST00000479300 SASH1O94885 1247 aa8.57□□□□□ -1.04
VCP-205ENST00000479300 HOXB7P09629 217 aa8.57□□□□□ -1.04
VCP-205ENST00000479300 KLRK1P26718 216 aa8.57□□□□□ -1.04
VCP-205ENST00000479300 LDLRAD1Q5T700 205 aa8.57□□□□□ -1.04
VCP-205ENST00000479300 DUSP27Q5VZP5 1158 aa8.57□□□□□ -1.04
VCP-205ENST00000479300 ZBED3Q96IU2 234 aaPredicted RBP8.57□□□□□ -1.04
VCP-205ENST00000479300 CHMP4AQ9BY43 222 aa8.57□□□□□ -1.04
VCP-205ENST00000479300 HYPKQ9NX55 129 aa8.57□□□□□ -1.04
VCP-205ENST00000479300 ADAMTS8Q9UP79 889 aa8.57□□□□□ -1.04
VCP-205ENST00000479300 LAMB1P07942 1786 aa8.57□□□□□ -1.04
VCP-205ENST00000479300 RBBP6Q7Z6E9 1792 aaKnown RBP8.57□□□□□ -1.04
VCP-205ENST00000479300 G3V3G9 751 aa8.56□□□□□ -1.04
VCP-205ENST00000479300 IGF2BP3O00425 579 aaKnown RBP eCLIP8.56□□□□□ -1.04
VCP-205ENST00000479300 FKTNO75072 461 aa8.56□□□□□ -1.04
VCP-205ENST00000479300 PCCAP05165 728 aaPredicted RBP8.56□□□□□ -1.04
VCP-205ENST00000479300 PRKG1Q13976 671 aa8.56□□□□□ -1.04
VCP-205ENST00000479300 CCDC152Q4G0S7 254 aa8.56□□□□□ -1.04
VCP-205ENST00000479300 DCAF8Q5TAQ9 597 aa8.56□□□□□ -1.04
VCP-205ENST00000479300 SPRYD7Q5W111 196 aa8.56□□□□□ -1.04
VCP-205ENST00000479300 OTOP1Q7RTM1 612 aa8.56□□□□□ -1.04
VCP-205ENST00000479300 PODNQ7Z5L7 613 aa8.56□□□□□ -1.04
VCP-205ENST00000479300 MYD88Q99836 296 aa8.56□□□□□ -1.04
VCP-205ENST00000479300 MBIPQ9NS73 344 aa8.56□□□□□ -1.04
VCP-205ENST00000479300 PCDHAC2Q9Y5I4 1007 aa8.56□□□□□ -1.04
VCP-205ENST00000479300 MED23Q9ULK4 1368 aa8.56□□□□□ -1.04
VCP-205ENST00000479300 AOX1Q06278 1338 aa8.55□□□□□ -1.04
VCP-205ENST00000479300 PDE8AO60658 829 aa8.55□□□□□ -1.04
VCP-205ENST00000479300 ZNF853P0CG23 659 aa8.55□□□□□ -1.04
VCP-205ENST00000479300 ATP2B4P23634 1241 aa8.55□□□□□ -1.04
VCP-205ENST00000479300 GNAI1P63096 354 aa8.55□□□□□ -1.04
VCP-205ENST00000479300 TTLL12Q14166 644 aaPredicted RBP8.55□□□□□ -1.04
VCP-205ENST00000479300 RIC3Q7Z5B4 369 aa8.55□□□□□ -1.04
VCP-205ENST00000479300 ANKRD18AQ8IVF6 992 aa8.55□□□□□ -1.04
VCP-205ENST00000479300 CLMNQ96JQ2 1002 aa8.55□□□□□ -1.04
VCP-205ENST00000479300 MINPP1Q9UNW1 487 aa8.55□□□□□ -1.04
VCP-205ENST00000479300 KIAA0100Q14667 2235 aaKnown RBP8.55□□□□□ -1.04
VCP-205ENST00000479300 ANP32CO43423 234 aa8.54□□□□□ -1.04
VCP-205ENST00000479300 IGKV5-2P06315 115 aa8.54□□□□□ -1.04
VCP-205ENST00000479300 GJA5P36382 358 aa8.54□□□□□ -1.04
VCP-205ENST00000479300 FXR1P51114 621 aaKnown RBP eCLIP8.54□□□□□ -1.04
VCP-205ENST00000479300 SREBF2Q12772 1141 aa8.54□□□□□ -1.04
VCP-205ENST00000479300 IFNL1Q8IU54 200 aa8.54□□□□□ -1.04
VCP-205ENST00000479300 CCDC191Q8NCU4 936 aa8.54□□□□□ -1.04
VCP-205ENST00000479300 TTLL11Q8NHH1 800 aa8.54□□□□□ -1.04
VCP-205ENST00000479300 GREM2Q9H772 168 aa8.54□□□□□ -1.04
VCP-205ENST00000479300 CEP290O15078 2479 aa8.54□□□□□ -1.04
VCP-205ENST00000479300 IRS2Q9Y4H2 1338 aa8.54□□□□□ -1.04
VCP-205ENST00000479300 SZT2Q5T011 3432 aa8.53□□□□□ -1.04
VCP-205ENST00000479300 ELL2O00472 640 aaPredicted RBP8.53□□□□□ -1.04
VCP-205ENST00000479300 APAF1O14727 1248 aa8.53□□□□□ -1.04
VCP-205ENST00000479300 EN2P19622 333 aaPredicted RBP8.53□□□□□ -1.04
VCP-205ENST00000479300 CCT4P50991 539 aaKnown RBP8.53□□□□□ -1.04
VCP-205ENST00000479300 CTSWP56202 376 aa8.53□□□□□ -1.04
VCP-205ENST00000479300 GOLGA2Q08379 1002 aa8.53□□□□□ -1.04
VCP-205ENST00000479300 STRIP1Q5VSL9 837 aa8.53□□□□□ -1.04
VCP-205ENST00000479300 KIAA0825Q8IV33 1275 aa8.53□□□□□ -1.04
VCP-205ENST00000479300 CERS5Q8N5B7 392 aa8.53□□□□□ -1.04
VCP-205ENST00000479300 C8orf58Q8NAV2 365 aa8.53□□□□□ -1.04
VCP-205ENST00000479300 CD99L2Q8TCZ2 262 aa8.53□□□□□ -1.04
VCP-205ENST00000479300 WNK4Q96J92 1243 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms