RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 TMOD3Q9NYL9 352 aa12.76□□□□□ -0.37
VPS52-217ENST00000478934 CEP126Q9P2H0 1117 aa12.76□□□□□ -0.37
VPS52-217ENST00000478934 DCCP43146 1447 aa12.76□□□□□ -0.37
VPS52-217ENST00000478934 PTPDC1A2A3K4 754 aa12.75□□□□□ -0.37
VPS52-217ENST00000478934 NKX1-1Q15270 411 aaPredicted RBP12.75□□□□□ -0.37
VPS52-217ENST00000478934 MAP3K11Q16584 847 aa12.75□□□□□ -0.37
VPS52-217ENST00000478934 BICD2Q8TD16 824 aa12.75□□□□□ -0.37
VPS52-217ENST00000478934 PUS7LQ9H0K6 701 aaKnown RBP12.75□□□□□ -0.37
VPS52-217ENST00000478934 TNMDQ9H2S6 317 aa12.75□□□□□ -0.37
VPS52-217ENST00000478934 KCNF1Q9H3M0 494 aa12.75□□□□□ -0.37
VPS52-217ENST00000478934 HELLSQ9NRZ9 838 aa12.75□□□□□ -0.37
VPS52-217ENST00000478934 PYCARDQ9ULZ3 195 aa12.75□□□□□ -0.37
VPS52-217ENST00000478934 PALLDQ8WX93 1383 aa12.75□□□□□ -0.37
VPS52-217ENST00000478934 PFKFB2O60825 505 aa12.75□□□□□ -0.37
VPS52-217ENST00000478934 ANO6Q4KMQ2 910 aa12.75□□□□□ -0.37
VPS52-217ENST00000478934 ERCC4Q92889 916 aaPredicted RBP12.75□□□□□ -0.37
VPS52-217ENST00000478934 CARD10Q9BWT7 1032 aa12.75□□□□□ -0.37
VPS52-217ENST00000478934 CCDC192P0DO97 292 aa12.75□□□□□ -0.37
VPS52-217ENST00000478934 ADD1P35611 737 aaKnown RBP12.75□□□□□ -0.37
VPS52-217ENST00000478934 TTC39AQ5SRH9 613 aa12.75□□□□□ -0.37
VPS52-217ENST00000478934 SASS6Q6UVJ0 657 aa12.75□□□□□ -0.37
VPS52-217ENST00000478934 SLC4A9Q96Q91 983 aa12.75□□□□□ -0.37
VPS52-217ENST00000478934 PDIA3P30101 505 aaKnown RBP12.74□□□□□ -0.37
VPS52-217ENST00000478934 SMARCC2Q8TAQ2 1214 aa12.74□□□□□ -0.37
VPS52-217ENST00000478934 DSCC1Q9BVC3 393 aa12.74□□□□□ -0.37
VPS52-217ENST00000478934 BCL11BQ9C0K0 894 aaPredicted RBP12.74□□□□□ -0.37
VPS52-217ENST00000478934 SCAND2PQ9GZW5 306 aaPredicted RBP12.74□□□□□ -0.37
VPS52-217ENST00000478934 TJP1Q07157 1748 aa12.74□□□□□ -0.37
VPS52-217ENST00000478934 ELP1O95163 1332 aa12.74□□□□□ -0.37
VPS52-217ENST00000478934 SOS2Q07890 1332 aaPredicted RBP12.74□□□□□ -0.37
VPS52-217ENST00000478934 SNAP23O00161 211 aa12.74□□□□□ -0.37
VPS52-217ENST00000478934 TAF7LQ5H9L4 462 aa12.74□□□□□ -0.37
VPS52-217ENST00000478934 PIBF1Q8WXW3 757 aa12.74□□□□□ -0.37
VPS52-217ENST00000478934 PDCL3Q9H2J4 239 aa12.74□□□□□ -0.37
VPS52-217ENST00000478934 GREM2Q9H772 168 aa12.74□□□□□ -0.37
VPS52-217ENST00000478934 GPR108Q9NPR9 543 aa12.74□□□□□ -0.37
VPS52-217ENST00000478934 ATG3Q9NT62 314 aa12.74□□□□□ -0.37
VPS52-217ENST00000478934 ILDR1Q86SU0 546 aaPredicted RBP12.73□□□□□ -0.37
VPS52-217ENST00000478934 SYTL4Q96C24 671 aaPredicted RBP12.73□□□□□ -0.37
VPS52-217ENST00000478934 USP28Q96RU2 1077 aa12.73□□□□□ -0.37
VPS52-217ENST00000478934 FGAP02671 866 aa12.73□□□□□ -0.37
VPS52-217ENST00000478934 FBXW7Q969H0 707 aa12.73□□□□□ -0.37
VPS52-217ENST00000478934 DNAJC25Q9H1X3 360 aa12.73□□□□□ -0.37
VPS52-217ENST00000478934 GOLPH3LQ9H4A5 285 aa12.73□□□□□ -0.37
VPS52-217ENST00000478934 CBX8Q9HC52 389 aa12.73□□□□□ -0.37
VPS52-217ENST00000478934 NRBP1Q9UHY1 535 aa12.73□□□□□ -0.37
VPS52-217ENST00000478934 CIAO1O76071 339 aa12.72□□□□□ -0.37
VPS52-217ENST00000478934 FDPSP14324 419 aaKnown RBP12.72□□□□□ -0.37
VPS52-217ENST00000478934 PTGS1P23219 599 aa12.72□□□□□ -0.37
VPS52-217ENST00000478934 CCDC158Q5M9N0 1113 aa12.72□□□□□ -0.37
VPS52-217ENST00000478934 HELBQ8NG08 1087 aaPredicted RBP12.72□□□□□ -0.37
VPS52-217ENST00000478934 BTG4Q9NY30 223 aa12.72□□□□□ -0.37
VPS52-217ENST00000478934 KAT6BQ8WYB5 2073 aa12.72□□□□□ -0.37
VPS52-217ENST00000478934 RFX7Q2KHR2 1363 aa12.72□□□□□ -0.37
VPS52-217ENST00000478934 LAMA4Q16363 1823 aa12.72□□□□□ -0.37
VPS52-217ENST00000478934 LRMPQ12912 555 aa12.72□□□□□ -0.37
VPS52-217ENST00000478934 CLSTN2Q9H4D0 955 aa12.72□□□□□ -0.37
VPS52-217ENST00000478934 TBC1D2BQ9UPU7 963 aa12.72□□□□□ -0.37
VPS52-217ENST00000478934 NUP188Q5SRE5 1749 aa12.71□□□□□ -0.37
VPS52-217ENST00000478934 IFIT5Q13325 482 aaKnown RBP12.71□□□□□ -0.37
VPS52-217ENST00000478934 GLIPR1L2Q4G1C9 344 aa12.71□□□□□ -0.37
VPS52-217ENST00000478934 FAM200AQ8TCP9 573 aa12.71□□□□□ -0.37
VPS52-217ENST00000478934 INCENPQ9NQS7 918 aa12.71□□□□□ -0.37
VPS52-217ENST00000478934 LAMB4A4D0S4 1761 aa12.71□□□□□ -0.37
VPS52-217ENST00000478934 ABCC6O95255 1503 aa12.71□□□□□ -0.38
VPS52-217ENST00000478934 A0A0G2JS52 829 aa12.71□□□□□ -0.38
VPS52-217ENST00000478934 ITGA6P23229 1130 aa12.71□□□□□ -0.38
VPS52-217ENST00000478934 MCAMP43121 646 aa12.71□□□□□ -0.38
VPS52-217ENST00000478934 METTL24Q5JXM2 366 aa12.71□□□□□ -0.38
VPS52-217ENST00000478934 LDHAL6AQ6ZMR3 332 aa12.71□□□□□ -0.38
VPS52-217ENST00000478934 KIF6Q6ZMV9 814 aa12.71□□□□□ -0.38
VPS52-217ENST00000478934 RXRAP19793 462 aa12.7□□□□□ -0.38
VPS52-217ENST00000478934 DRC7Q8IY82 874 aa12.7□□□□□ -0.38
VPS52-217ENST00000478934 AGXT2Q9BYV1 514 aa12.7□□□□□ -0.38
VPS52-217ENST00000478934 ZBTB1Q9Y2K1 713 aa12.7□□□□□ -0.38
VPS52-217ENST00000478934 TNS2Q63HR2 1409 aa12.7□□□□□ -0.38
VPS52-217ENST00000478934 PCCAP05165 728 aaPredicted RBP12.7□□□□□ -0.38
VPS52-217ENST00000478934 POLR3DP05423 398 aaPredicted RBP12.7□□□□□ -0.38
VPS52-217ENST00000478934 CSF1RP07333 972 aa12.7□□□□□ -0.38
VPS52-217ENST00000478934 HMGB1P09429 215 aaKnown RBP12.7□□□□□ -0.38
VPS52-217ENST00000478934 TERF1P54274 439 aa12.7□□□□□ -0.38
VPS52-217ENST00000478934 ANTXR2P58335 489 aa12.7□□□□□ -0.38
VPS52-217ENST00000478934 NLRP10Q86W26 655 aa12.7□□□□□ -0.38
VPS52-217ENST00000478934 CCAR1Q8IX12 1150 aaKnown RBP12.7□□□□□ -0.38
VPS52-217ENST00000478934 ZBTB38Q8NAP3 1195 aaPredicted RBP12.7□□□□□ -0.38
VPS52-217ENST00000478934 TTLL11Q8NHH1 800 aa12.7□□□□□ -0.38
VPS52-217ENST00000478934 XIRP1Q702N8 1843 aaKnown RBP12.69□□□□□ -0.38
VPS52-217ENST00000478934 ATP2B3Q16720 1220 aa12.69□□□□□ -0.38
VPS52-217ENST00000478934 ZMYND15Q9H091 742 aa12.69□□□□□ -0.38
VPS52-217ENST00000478934 RIPOR2Q9Y4F9 1068 aa12.69□□□□□ -0.38
VPS52-217ENST00000478934 GPAA1O43292 621 aa12.69□□□□□ -0.38
VPS52-217ENST00000478934 PRC1O43663 620 aa12.69□□□□□ -0.38
VPS52-217ENST00000478934 C11orf57Q6ZUT1 292 aaPredicted RBP12.69□□□□□ -0.38
VPS52-217ENST00000478934 NBPF3Q9H094 633 aa12.69□□□□□ -0.38
VPS52-217ENST00000478934 SENP2Q9HC62 589 aa12.69□□□□□ -0.38
VPS52-217ENST00000478934 PIH1D3Q9NQM4 214 aaKnown RBP12.69□□□□□ -0.38
VPS52-217ENST00000478934 UBR2Q8IWV8 1755 aa12.69□□□□□ -0.38
VPS52-217ENST00000478934 SALL1Q9NSC2 1324 aa12.68□□□□□ -0.38
VPS52-217ENST00000478934 KLF18A0A0U1RQI7 1052 aa12.68□□□□□ -0.38
VPS52-217ENST00000478934 CCDC186Q7Z3E2 898 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms