RNA–Protein interactions for RNA: ENST00000478215.1

COL1A2-207, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 3

Gene COL1A2, Length 863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-207ENST00000478215 DZIP1LQ8IYY4 767 aaKnown RBP16.29■□□□□ 0.2
COL1A2-207ENST00000478215 YTHDC1Q96MU7 727 aaKnown RBP16.29■□□□□ 0.2
COL1A2-207ENST00000478215 PTPN12Q05209 780 aaKnown RBP16.28■□□□□ 0.2
COL1A2-207ENST00000478215 FSTL1Q12841 308 aa16.28■□□□□ 0.2
COL1A2-207ENST00000478215 FTSJ3Q8IY81 847 aaKnown RBP16.28■□□□□ 0.2
COL1A2-207ENST00000478215 PANK1Q8TE04 598 aa16.28■□□□□ 0.2
COL1A2-207ENST00000478215 RCAN3Q9UKA8 241 aa16.28■□□□□ 0.2
COL1A2-207ENST00000478215 VIL1P09327 827 aaKnown RBP16.27■□□□□ 0.2
COL1A2-207ENST00000478215 HSPA6P17066 643 aa16.27■□□□□ 0.2
COL1A2-207ENST00000478215 CHADLQ6NUI6 762 aa16.27■□□□□ 0.2
COL1A2-207ENST00000478215 C15orf52Q6ZUT6 534 aaKnown RBP16.27■□□□□ 0.2
COL1A2-207ENST00000478215 PODNQ7Z5L7 613 aa16.27■□□□□ 0.2
COL1A2-207ENST00000478215 LDHDQ86WU2 507 aa16.27■□□□□ 0.2
COL1A2-207ENST00000478215 VGLL2Q8N8G2 317 aa16.27■□□□□ 0.2
COL1A2-207ENST00000478215 ZNF609O15014 1411 aa16.27■□□□□ 0.19
COL1A2-207ENST00000478215 PCNTO95613 3336 aa16.26■□□□□ 0.19
COL1A2-207ENST00000478215 METTL24Q5JXM2 366 aa16.26■□□□□ 0.19
COL1A2-207ENST00000478215 ITPRIPQ8IWB1 547 aa16.26■□□□□ 0.19
COL1A2-207ENST00000478215 MICALL2Q8IY33 904 aa16.26■□□□□ 0.19
COL1A2-207ENST00000478215 COA1Q9GZY4 146 aa16.26■□□□□ 0.19
COL1A2-207ENST00000478215 SIL1Q9H173 461 aa16.26■□□□□ 0.19
COL1A2-207ENST00000478215 CNOT7Q9UIV1 285 aaKnown RBP16.26■□□□□ 0.19
COL1A2-207ENST00000478215 PA2G4Q9UQ80 394 aaKnown RBP16.26■□□□□ 0.19
COL1A2-207ENST00000478215 MROH5Q6ZUA9 1318 aa16.25■□□□□ 0.19
COL1A2-207ENST00000478215 EYA2O00167 538 aa16.25■□□□□ 0.19
COL1A2-207ENST00000478215 GNAI2P04899 355 aa16.25■□□□□ 0.19
COL1A2-207ENST00000478215 ATG9AQ7Z3C6 839 aa16.25■□□□□ 0.19
COL1A2-207ENST00000478215 PNMA8AQ86V59 439 aaPredicted RBP16.25■□□□□ 0.19
COL1A2-207ENST00000478215 TRPM4Q8TD43 1214 aa16.25■□□□□ 0.19
COL1A2-207ENST00000478215 DPF2Q92785 391 aa16.25■□□□□ 0.19
COL1A2-207ENST00000478215 MXD3Q9BW11 206 aa16.25■□□□□ 0.19
COL1A2-207ENST00000478215 ADARB2Q9NS39 739 aaKnown RBP16.25■□□□□ 0.19
COL1A2-207ENST00000478215 HDAC5Q9UQL6 1122 aa16.25■□□□□ 0.19
COL1A2-207ENST00000478215 CLEC11AQ9Y240 323 aa16.25■□□□□ 0.19
COL1A2-207ENST00000478215 MYH2Q9UKX2 1941 aa16.25■□□□□ 0.19
COL1A2-207ENST00000478215 AKAP11Q9UKA4 1901 aa16.24■□□□□ 0.19
COL1A2-207ENST00000478215 USP17L3A6NCW0 530 aa16.24■□□□□ 0.19
COL1A2-207ENST00000478215 USP17L4A6NCW7 530 aa16.24■□□□□ 0.19
COL1A2-207ENST00000478215 RPS12P25398 132 aaKnown RBP16.24■□□□□ 0.19
COL1A2-207ENST00000478215 HIRAP54198 1017 aaPredicted RBP16.24■□□□□ 0.19
COL1A2-207ENST00000478215 MTX1Q13505 466 aa16.24■□□□□ 0.19
COL1A2-207ENST00000478215 UBE4AQ14139 1066 aa16.24■□□□□ 0.19
COL1A2-207ENST00000478215 DACT2Q5SW24 774 aa16.24■□□□□ 0.19
COL1A2-207ENST00000478215 MAP1SQ66K74 1059 aaPredicted RBP16.24■□□□□ 0.19
COL1A2-207ENST00000478215 RSBN1LQ6PCB5 846 aaPredicted RBP16.24■□□□□ 0.19
COL1A2-207ENST00000478215 USP50Q70EL3 339 aaPredicted RBP16.24■□□□□ 0.19
COL1A2-207ENST00000478215 USP17L1Q7RTZ2 530 aa16.24■□□□□ 0.19
COL1A2-207ENST00000478215 GMLQ99445 158 aa16.24■□□□□ 0.19
COL1A2-207ENST00000478215 CD209Q9NNX6 404 aa16.24■□□□□ 0.19
COL1A2-207ENST00000478215 SRGAP3O43295 1099 aa16.23■□□□□ 0.19
COL1A2-207ENST00000478215 EGFRP00533 1210 aa16.23■□□□□ 0.19
COL1A2-207ENST00000478215 SAMD7Q7Z3H4 446 aa16.23■□□□□ 0.19
COL1A2-207ENST00000478215 FBXW7Q969H0 707 aa16.23■□□□□ 0.19
COL1A2-207ENST00000478215 C1orf115Q9H7X2 142 aa16.23■□□□□ 0.19
COL1A2-207ENST00000478215 PNMA6EA0A0J9YXQ4 647 aa16.22■□□□□ 0.19
COL1A2-207ENST00000478215 ZBTB7BO15156 539 aaPredicted RBP16.22■□□□□ 0.19
COL1A2-207ENST00000478215 PDE8BO95263 885 aa16.22■□□□□ 0.19
COL1A2-207ENST00000478215 ITGBL1O95965 494 aaPredicted RBP16.22■□□□□ 0.19
COL1A2-207ENST00000478215 GYG1P46976 350 aa16.22■□□□□ 0.19
COL1A2-207ENST00000478215 HTRA3P83110 453 aa16.22■□□□□ 0.19
COL1A2-207ENST00000478215 ZNF804AQ7Z570 1209 aa16.22■□□□□ 0.19
COL1A2-207ENST00000478215 COPRSQ9NQ92 184 aa16.22■□□□□ 0.19
COL1A2-207ENST00000478215 H7C1D1 291 aa16.21■□□□□ 0.19
COL1A2-207ENST00000478215 CIAO1O76071 339 aa16.21■□□□□ 0.19
COL1A2-207ENST00000478215 IL1R1P14778 569 aa16.21■□□□□ 0.19
COL1A2-207ENST00000478215 GTF2IP78347 998 aa16.21■□□□□ 0.19
COL1A2-207ENST00000478215 TBC1D10BQ4KMP7 808 aaPredicted RBP16.21■□□□□ 0.19
COL1A2-207ENST00000478215 STRIP1Q5VSL9 837 aa16.21■□□□□ 0.19
COL1A2-207ENST00000478215 TTLL5Q6EMB2 1281 aa16.21■□□□□ 0.19
COL1A2-207ENST00000478215 AGBL3Q8NEM8 1001 aa16.21■□□□□ 0.19
COL1A2-207ENST00000478215 FAM84BQ96KN1 310 aaPredicted RBP16.21■□□□□ 0.19
COL1A2-207ENST00000478215 AK9Q5TCS8 1911 aa16.21■□□□□ 0.19
COL1A2-207ENST00000478215 FGFR2P21802 821 aa16.2■□□□□ 0.18
COL1A2-207ENST00000478215 C20orf194Q5TEA3 1177 aa16.2■□□□□ 0.18
COL1A2-207ENST00000478215 FBXO3Q9UK99 471 aa16.2■□□□□ 0.18
COL1A2-207ENST00000478215 JAG2Q9Y219 1238 aa16.2■□□□□ 0.18
COL1A2-207ENST00000478215 PASKQ96RG2 1323 aa16.19■□□□□ 0.18
COL1A2-207ENST00000478215 HIBADHP31937 336 aaKnown RBP16.19■□□□□ 0.18
COL1A2-207ENST00000478215 APLP1P51693 650 aa16.19■□□□□ 0.18
COL1A2-207ENST00000478215 ZNF280AP59817 542 aaPredicted RBP16.19■□□□□ 0.18
COL1A2-207ENST00000478215 FMR1Q06787 632 aaKnown RBP eCLIP16.19■□□□□ 0.18
COL1A2-207ENST00000478215 PUM3Q15397 648 aaKnown RBP16.19■□□□□ 0.18
COL1A2-207ENST00000478215 RBM26Q5T8P6 1007 aaKnown RBP16.19■□□□□ 0.18
COL1A2-207ENST00000478215 FBXO33Q7Z6M2 555 aa16.19■□□□□ 0.18
COL1A2-207ENST00000478215 CNTROBQ8N137 903 aa16.19■□□□□ 0.18
COL1A2-207ENST00000478215 CERS5Q8N5B7 392 aa16.19■□□□□ 0.18
COL1A2-207ENST00000478215 TDRD7Q8NHU6 1098 aaKnown RBP16.19■□□□□ 0.18
COL1A2-207ENST00000478215 COG6Q9Y2V7 657 aa16.19■□□□□ 0.18
COL1A2-207ENST00000478215 USP17L8P0C7I0 530 aa16.18■□□□□ 0.18
COL1A2-207ENST00000478215 MS4A1P11836 297 aa16.18■□□□□ 0.18
COL1A2-207ENST00000478215 IL15P40933 162 aaPredicted RBP16.18■□□□□ 0.18
COL1A2-207ENST00000478215 MVPQ14764 893 aaKnown RBP16.18■□□□□ 0.18
COL1A2-207ENST00000478215 KIF4BQ2VIQ3 1234 aa16.18■□□□□ 0.18
COL1A2-207ENST00000478215 CEP126Q9P2H0 1117 aa16.18■□□□□ 0.18
COL1A2-207ENST00000478215 PGAP2Q9UHJ9 254 aa16.18■□□□□ 0.18
COL1A2-207ENST00000478215 IQSEC3Q9UPP2 1182 aaPredicted RBP16.18■□□□□ 0.18
COL1A2-207ENST00000478215 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.18■□□□□ 0.18
COL1A2-207ENST00000478215 ASTN2O75129 1339 aaPredicted RBP16.18■□□□□ 0.18
COL1A2-207ENST00000478215 BCAMP50895 628 aa16.17■□□□□ 0.18
COL1A2-207ENST00000478215 POLA2Q14181 598 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms