RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 ZNF609O15014 1411 aa17.39■□□□□ 0.38
HDAC7-222ENST00000477937 TAF5LO75529 589 aa17.39■□□□□ 0.37
HDAC7-222ENST00000477937 HELBQ8NG08 1087 aaPredicted RBP17.39■□□□□ 0.37
HDAC7-222ENST00000477937 KAZALD1Q96I82 304 aa17.39■□□□□ 0.37
HDAC7-222ENST00000477937 GLIS2Q9BZE0 524 aaPredicted RBP17.39■□□□□ 0.37
HDAC7-222ENST00000477937 CNNM1Q9NRU3 951 aa17.39■□□□□ 0.37
HDAC7-222ENST00000477937 ZNF646O15015 1829 aaPredicted RBP17.38■□□□□ 0.37
HDAC7-222ENST00000477937 RASSF10A6NK89 507 aa17.38■□□□□ 0.37
HDAC7-222ENST00000477937 EGFRP00533 1210 aa17.38■□□□□ 0.37
HDAC7-222ENST00000477937 KIF4BQ2VIQ3 1234 aa17.38■□□□□ 0.37
HDAC7-222ENST00000477937 CST9Q5W186 159 aa17.38■□□□□ 0.37
HDAC7-222ENST00000477937 FBXW7Q969H0 707 aa17.38■□□□□ 0.37
HDAC7-222ENST00000477937 GMLQ99445 158 aa17.38■□□□□ 0.37
HDAC7-222ENST00000477937 BICC1Q9H694 974 aaKnown RBP17.38■□□□□ 0.37
HDAC7-222ENST00000477937 PLIN1O60240 522 aa17.37■□□□□ 0.37
HDAC7-222ENST00000477937 USP17L8P0C7I0 530 aa17.37■□□□□ 0.37
HDAC7-222ENST00000477937 VEGFBP49765 207 aa17.37■□□□□ 0.37
HDAC7-222ENST00000477937 ZNF280AP59817 542 aaPredicted RBP17.37■□□□□ 0.37
HDAC7-222ENST00000477937 STRIP1Q5VSL9 837 aa17.37■□□□□ 0.37
HDAC7-222ENST00000477937 USP48Q86UV5 1035 aa17.37■□□□□ 0.37
HDAC7-222ENST00000477937 DCPSQ96C86 337 aaKnown RBP17.37■□□□□ 0.37
HDAC7-222ENST00000477937 USP44Q9H0E7 712 aa17.37■□□□□ 0.37
HDAC7-222ENST00000477937 NOB1Q9ULX3 412 aaKnown RBP17.37■□□□□ 0.37
HDAC7-222ENST00000477937 SNAP23O00161 211 aa17.36■□□□□ 0.37
HDAC7-222ENST00000477937 CELF2O95319 508 aaKnown RBP17.36■□□□□ 0.37
HDAC7-222ENST00000477937 KLRK1P26718 216 aa17.36■□□□□ 0.37
HDAC7-222ENST00000477937 BRPF1P55201 1214 aaPredicted RBP17.36■□□□□ 0.37
HDAC7-222ENST00000477937 RABL6Q3YEC7 729 aaPredicted RBP17.36■□□□□ 0.37
HDAC7-222ENST00000477937 DACT2Q5SW24 774 aa17.36■□□□□ 0.37
HDAC7-222ENST00000477937 TTLL5Q6EMB2 1281 aa17.36■□□□□ 0.37
HDAC7-222ENST00000477937 C15orf52Q6ZUT6 534 aaKnown RBP17.36■□□□□ 0.37
HDAC7-222ENST00000477937 MYO3BQ8WXR4 1341 aa17.36■□□□□ 0.37
HDAC7-222ENST00000477937 HSPA1AP0DMV8 641 aaKnown RBP17.35■□□□□ 0.37
HDAC7-222ENST00000477937 HSPA1BP0DMV9 641 aaKnown RBP17.35■□□□□ 0.37
HDAC7-222ENST00000477937 RARSP54136 660 aaKnown RBP17.35■□□□□ 0.37
HDAC7-222ENST00000477937 KRT26Q7Z3Y9 468 aa17.35■□□□□ 0.37
HDAC7-222ENST00000477937 OGFOD1Q8N543 542 aa17.35■□□□□ 0.37
HDAC7-222ENST00000477937 API5Q9BZZ5 524 aaKnown RBP17.35■□□□□ 0.37
HDAC7-222ENST00000477937 ZNF408Q9H9D4 720 aa17.35■□□□□ 0.37
HDAC7-222ENST00000477937 CD209Q9NNX6 404 aa17.35■□□□□ 0.37
HDAC7-222ENST00000477937 MYOZ2Q9NPC6 264 aa17.35■□□□□ 0.37
HDAC7-222ENST00000477937 ZNF804AQ7Z570 1209 aa17.34■□□□□ 0.37
HDAC7-222ENST00000477937 ANKRD44Q8N8A2 993 aa17.34■□□□□ 0.37
HDAC7-222ENST00000477937 TLL2Q9Y6L7 1015 aa17.34■□□□□ 0.37
HDAC7-222ENST00000477937 PCNTO95613 3336 aa17.33■□□□□ 0.37
HDAC7-222ENST00000477937 WDR33Q9C0J8 1336 aaKnown RBP17.33■□□□□ 0.36
HDAC7-222ENST00000477937 IRS2Q9Y4H2 1338 aa17.33■□□□□ 0.36
HDAC7-222ENST00000477937 ECE1P42892 770 aa17.33■□□□□ 0.36
HDAC7-222ENST00000477937 MMP14P50281 582 aa17.33■□□□□ 0.36
HDAC7-222ENST00000477937 GTF2IP78347 998 aa17.33■□□□□ 0.36
HDAC7-222ENST00000477937 HNRNPUQ00839 825 aaKnown RBP eCLIP17.33■□□□□ 0.36
HDAC7-222ENST00000477937 SCARF1Q14162 830 aa17.33■□□□□ 0.36
HDAC7-222ENST00000477937 PAXIP1Q6ZW49 1069 aaPredicted RBP17.33■□□□□ 0.36
HDAC7-222ENST00000477937 MXD3Q9BW11 206 aa17.33■□□□□ 0.36
HDAC7-222ENST00000477937 PUS3Q9BZE2 481 aaKnown RBP17.33■□□□□ 0.36
HDAC7-222ENST00000477937 GGA3Q9NZ52 723 aa17.33■□□□□ 0.36
HDAC7-222ENST00000477937 MROH5Q6ZUA9 1318 aa17.32■□□□□ 0.36
HDAC7-222ENST00000477937 KIF16BQ96L93 1317 aa17.32■□□□□ 0.36
HDAC7-222ENST00000477937 UBE4AQ14139 1066 aa17.32■□□□□ 0.36
HDAC7-222ENST00000477937 SAPCD2Q86UD0 394 aa17.32■□□□□ 0.36
HDAC7-222ENST00000477937 SULF1Q8IWU6 871 aa17.32■□□□□ 0.36
HDAC7-222ENST00000477937 RIPOR2Q9Y4F9 1068 aa17.32■□□□□ 0.36
HDAC7-222ENST00000477937 IL1R1P14778 569 aa17.31■□□□□ 0.36
HDAC7-222ENST00000477937 ANGEL2Q5VTE6 544 aaKnown RBP17.31■□□□□ 0.36
HDAC7-222ENST00000477937 ARHGAP45Q92619 1136 aa17.31■□□□□ 0.36
HDAC7-222ENST00000477937 HDAC5Q9UQL6 1122 aa17.31■□□□□ 0.36
HDAC7-222ENST00000477937 ASTN2O75129 1339 aaPredicted RBP17.3■□□□□ 0.36
HDAC7-222ENST00000477937 ADM5C9JUS6 153 aa17.3■□□□□ 0.36
HDAC7-222ENST00000477937 UBTFL1P0CB47 393 aaPredicted RBP17.3■□□□□ 0.36
HDAC7-222ENST00000477937 DLK2Q6UY11 383 aa17.3■□□□□ 0.36
HDAC7-222ENST00000477937 HHIPL1Q96JK4 782 aa17.3■□□□□ 0.36
HDAC7-222ENST00000477937 CAPNS2Q96L46 248 aa17.3■□□□□ 0.36
HDAC7-222ENST00000477937 HDAC9Q9UKV0 1011 aa17.3■□□□□ 0.36
HDAC7-222ENST00000477937 PITPNM2Q9BZ72 1349 aa17.29■□□□□ 0.36
HDAC7-222ENST00000477937 IPO8O15397 1037 aaKnown RBP17.29■□□□□ 0.36
HDAC7-222ENST00000477937 GRM1Q13255 1194 aa17.29■□□□□ 0.36
HDAC7-222ENST00000477937 LRRC24Q50LG9 513 aa17.29■□□□□ 0.36
HDAC7-222ENST00000477937 METTL24Q5JXM2 366 aa17.29■□□□□ 0.36
HDAC7-222ENST00000477937 CYP4F22Q6NT55 531 aa17.29■□□□□ 0.36
HDAC7-222ENST00000477937 KIAA0825Q8IV33 1275 aa17.29■□□□□ 0.36
HDAC7-222ENST00000477937 MAP2K1Q02750 393 aaPredicted RBP17.28■□□□□ 0.36
HDAC7-222ENST00000477937 NBPF9Q3BBW0 867 aa17.28■□□□□ 0.36
HDAC7-222ENST00000477937 C2orf69Q8N8R5 385 aa17.28■□□□□ 0.36
HDAC7-222ENST00000477937 KLHDC4Q8TBB5 520 aa17.28■□□□□ 0.36
HDAC7-222ENST00000477937 AIDAQ96BJ3 306 aa17.28■□□□□ 0.36
HDAC7-222ENST00000477937 WNT10BO00744 389 aa17.27■□□□□ 0.36
HDAC7-222ENST00000477937 SASH1O94885 1247 aa17.27■□□□□ 0.36
HDAC7-222ENST00000477937 PDE8BO95263 885 aa17.27■□□□□ 0.36
HDAC7-222ENST00000477937 HIBADHP31937 336 aaKnown RBP17.27■□□□□ 0.36
HDAC7-222ENST00000477937 FKBP1AP62942 108 aaKnown RBP17.27■□□□□ 0.36
HDAC7-222ENST00000477937 GBA2Q9HCG7 927 aaPredicted RBP17.27■□□□□ 0.36
HDAC7-222ENST00000477937 WBP1LQ9NX94 342 aa17.27■□□□□ 0.36
HDAC7-222ENST00000477937 ECM29Q5VYK3 1845 aa17.26■□□□□ 0.35
HDAC7-222ENST00000477937 GYG1P46976 350 aa17.26■□□□□ 0.35
HDAC7-222ENST00000477937 HUNKP57058 714 aa17.26■□□□□ 0.35
HDAC7-222ENST00000477937 INTS3Q68E01 1043 aaKnown RBP17.26■□□□□ 0.35
HDAC7-222ENST00000477937 CERS5Q8N5B7 392 aa17.26■□□□□ 0.35
HDAC7-222ENST00000477937 TDRD7Q8NHU6 1098 aaKnown RBP17.26■□□□□ 0.35
HDAC7-222ENST00000477937 FRAT1Q92837 279 aaPredicted RBP17.26■□□□□ 0.35
HDAC7-222ENST00000477937 CDCA5Q96FF9 252 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms