RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 RIMS2Q9UQ26 1411 aa7.18□□□□□ -1.26
CKS1B-207ENST00000477676 RPRD2Q5VT52 1461 aaKnown RBP7.17□□□□□ -1.26
CKS1B-207ENST00000477676 SFSWAPQ12872 951 aaKnown RBP7.17□□□□□ -1.26
CKS1B-207ENST00000477676 LENG1Q96BZ8 264 aaPredicted RBP7.17□□□□□ -1.26
CKS1B-207ENST00000477676 MSH6P52701 1360 aa7.17□□□□□ -1.26
CKS1B-207ENST00000477676 JCADQ9P266 1359 aa7.17□□□□□ -1.26
CKS1B-207ENST00000477676 PTPRUQ92729 1446 aa7.17□□□□□ -1.26
CKS1B-207ENST00000477676 TMEM229AB2RXF0 380 aa7.16□□□□□ -1.26
CKS1B-207ENST00000477676 ELNP15502 786 aa7.16□□□□□ -1.26
CKS1B-207ENST00000477676 TXLNAP40222 546 aa7.16□□□□□ -1.26
CKS1B-207ENST00000477676 ADH7P40394 386 aa7.16□□□□□ -1.26
CKS1B-207ENST00000477676 WASHC4Q2M389 1173 aa7.16□□□□□ -1.26
CKS1B-207ENST00000477676 LRRC69Q6ZNQ3 347 aa7.16□□□□□ -1.26
CKS1B-207ENST00000477676 SNRKQ9NRH2 765 aa7.16□□□□□ -1.26
CKS1B-207ENST00000477676 SLC52A1Q9NWF4 448 aa7.16□□□□□ -1.26
CKS1B-207ENST00000477676 ANKRD50Q9ULJ7 1429 aa7.16□□□□□ -1.26
CKS1B-207ENST00000477676 NHSL1Q5SYE7 1610 aa7.16□□□□□ -1.26
CKS1B-207ENST00000477676 IQGAP3Q86VI3 1631 aa7.16□□□□□ -1.26
CKS1B-207ENST00000477676 XRN1Q8IZH2 1706 aaKnown RBP7.15□□□□□ -1.26
CKS1B-207ENST00000477676 A0A0A0MRY4 1105 aa7.15□□□□□ -1.26
CKS1B-207ENST00000477676 NRG1Q02297 640 aaPredicted RBP7.15□□□□□ -1.26
CKS1B-207ENST00000477676 SHISA2Q6UWI4 295 aa7.15□□□□□ -1.26
CKS1B-207ENST00000477676 WWC1Q8IX03 1113 aa7.15□□□□□ -1.26
CKS1B-207ENST00000477676 TBX22Q9Y458 520 aa7.15□□□□□ -1.26
CKS1B-207ENST00000477676 MAP7D1Q3KQU3 841 aa7.14□□□□□ -1.27
CKS1B-207ENST00000477676 SSBP4Q9BWG4 385 aaPredicted RBP7.14□□□□□ -1.27
CKS1B-207ENST00000477676 SPHKAPQ2M3C7 1700 aa7.13□□□□□ -1.27
CKS1B-207ENST00000477676 NALCNQ8IZF0 1738 aa7.13□□□□□ -1.27
CKS1B-207ENST00000477676 NCOA3Q9Y6Q9 1424 aa7.13□□□□□ -1.27
CKS1B-207ENST00000477676 LILRB5O75023 590 aa7.13□□□□□ -1.27
CKS1B-207ENST00000477676 SOX11P35716 441 aa7.13□□□□□ -1.27
CKS1B-207ENST00000477676 SPEM2Q0P670 501 aa7.13□□□□□ -1.27
CKS1B-207ENST00000477676 SEMA3FQ13275 785 aa7.13□□□□□ -1.27
CKS1B-207ENST00000477676 ZDHHC1Q8WTX9 485 aa7.13□□□□□ -1.27
CKS1B-207ENST00000477676 C7orf43Q8WVR3 580 aa7.13□□□□□ -1.27
CKS1B-207ENST00000477676 RNF112Q9ULX5 631 aa7.13□□□□□ -1.27
CKS1B-207ENST00000477676 FAM50AQ14320 339 aaKnown RBP7.12□□□□□ -1.27
CKS1B-207ENST00000477676 BRINP3Q76B58 766 aa7.12□□□□□ -1.27
CKS1B-207ENST00000477676 RAB44Q7Z6P3 723 aaPredicted RBP7.12□□□□□ -1.27
CKS1B-207ENST00000477676 NEUROD4Q9HD90 331 aa7.12□□□□□ -1.27
CKS1B-207ENST00000477676 TBC1D2BQ9UPU7 963 aa7.12□□□□□ -1.27
CKS1B-207ENST00000477676 TRPM2O94759 1503 aa7.11□□□□□ -1.27
CKS1B-207ENST00000477676 ASXL1Q8IXJ9 1541 aa7.11□□□□□ -1.27
CKS1B-207ENST00000477676 PAX4O43316 350 aa7.11□□□□□ -1.27
CKS1B-207ENST00000477676 RAC1P63000 192 aa7.11□□□□□ -1.27
CKS1B-207ENST00000477676 NEUROD1Q13562 356 aa7.11□□□□□ -1.27
CKS1B-207ENST00000477676 L3MBTL2Q969R5 705 aa7.11□□□□□ -1.27
CKS1B-207ENST00000477676 C19orf44Q9H6X5 657 aa7.11□□□□□ -1.27
CKS1B-207ENST00000477676 SETBP1Q9Y6X0 1596 aa7.11□□□□□ -1.27
CKS1B-207ENST00000477676 MST1RQ04912 1400 aa7.1□□□□□ -1.27
CKS1B-207ENST00000477676 PIK3R4Q99570 1358 aa7.1□□□□□ -1.27
CKS1B-207ENST00000477676 SPATA31A6Q5VVP1 1343 aa7.1□□□□□ -1.27
CKS1B-207ENST00000477676 LAMC1P11047 1609 aa7.1□□□□□ -1.27
CKS1B-207ENST00000477676 EML1O00423 815 aa7.1□□□□□ -1.27
CKS1B-207ENST00000477676 COBLO75128 1261 aa7.1□□□□□ -1.27
CKS1B-207ENST00000477676 PPP1R15AO75807 674 aaPredicted RBP7.1□□□□□ -1.27
CKS1B-207ENST00000477676 TXKP42681 527 aa7.1□□□□□ -1.27
CKS1B-207ENST00000477676 PLPP7Q8NBV4 271 aa7.1□□□□□ -1.27
CKS1B-207ENST00000477676 DDX17Q92841 729 aaKnown RBP7.1□□□□□ -1.27
CKS1B-207ENST00000477676 USP21Q9UK80 565 aa7.1□□□□□ -1.27
CKS1B-207ENST00000477676 AMOTL2Q9Y2J4 779 aa7.1□□□□□ -1.27
CKS1B-207ENST00000477676 SETD5Q9C0A6 1442 aa7.1□□□□□ -1.27
CKS1B-207ENST00000477676 METP08581 1390 aa7.09□□□□□ -1.27
CKS1B-207ENST00000477676 CLTCL1P53675 1640 aa7.09□□□□□ -1.27
CKS1B-207ENST00000477676 NOS2P35228 1153 aa7.09□□□□□ -1.27
CKS1B-207ENST00000477676 TEAD4Q15561 434 aa7.09□□□□□ -1.27
CKS1B-207ENST00000477676 TPRNQ4KMQ1 711 aa7.09□□□□□ -1.27
CKS1B-207ENST00000477676 SCHIP1Q9P0W5 487 aaPredicted RBP7.09□□□□□ -1.27
CKS1B-207ENST00000477676 NEXMIFQ5QGS0 1516 aa7.09□□□□□ -1.27
CKS1B-207ENST00000477676 KIF1BO60333 1816 aa7.08□□□□□ -1.28
CKS1B-207ENST00000477676 AFF2P51816 1311 aa7.08□□□□□ -1.28
CKS1B-207ENST00000477676 ATF3P18847 181 aa7.08□□□□□ -1.28
CKS1B-207ENST00000477676 ABL2P42684 1182 aa7.08□□□□□ -1.28
CKS1B-207ENST00000477676 C14orf37Q86TY3 774 aa7.08□□□□□ -1.28
CKS1B-207ENST00000477676 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.08□□□□□ -1.28
CKS1B-207ENST00000477676 KRTAP4-7Q9BYR0 210 aa7.08□□□□□ -1.28
CKS1B-207ENST00000477676 PCDHGA11Q9Y5H2 935 aa7.08□□□□□ -1.28
CKS1B-207ENST00000477676 CDK12Q9NYV4 1490 aaPredicted RBP7.08□□□□□ -1.28
CKS1B-207ENST00000477676 RGS12O14924 1447 aa7.08□□□□□ -1.28
CKS1B-207ENST00000477676 DCCP43146 1447 aa7.08□□□□□ -1.28
CKS1B-207ENST00000477676 ROCK1Q13464 1354 aa7.08□□□□□ -1.28
CKS1B-207ENST00000477676 MARF1Q9Y4F3 1742 aaKnown RBP7.07□□□□□ -1.28
CKS1B-207ENST00000477676 BACH1O14867 736 aa7.07□□□□□ -1.28
CKS1B-207ENST00000477676 LZTS3O60299 673 aaPredicted RBP7.07□□□□□ -1.28
CKS1B-207ENST00000477676 YBX3P16989 372 aaKnown RBP eCLIP7.07□□□□□ -1.28
CKS1B-207ENST00000477676 IRF5Q13568 498 aa7.07□□□□□ -1.28
CKS1B-207ENST00000477676 LCE1DQ5T752 114 aa7.07□□□□□ -1.28
CKS1B-207ENST00000477676 MEX3CQ5U5Q3 659 aaKnown RBP7.07□□□□□ -1.28
CKS1B-207ENST00000477676 ZNF772Q68DY9 489 aaPredicted RBP7.07□□□□□ -1.28
CKS1B-207ENST00000477676 DMRTC2Q8IXT2 367 aaPredicted RBP7.07□□□□□ -1.28
CKS1B-207ENST00000477676 FMR1NBQ8N0W7 255 aaPredicted RBP7.07□□□□□ -1.28
CKS1B-207ENST00000477676 NUDT8Q8WV74 236 aa7.07□□□□□ -1.28
CKS1B-207ENST00000477676 FMNL2Q96PY5 1086 aa7.07□□□□□ -1.28
CKS1B-207ENST00000477676 JPH1Q9HDC5 661 aaPredicted RBP7.07□□□□□ -1.28
CKS1B-207ENST00000477676 GPC6Q9Y625 555 aaPredicted RBP7.07□□□□□ -1.28
CKS1B-207ENST00000477676 NUP155O75694 1391 aa7.07□□□□□ -1.28
CKS1B-207ENST00000477676 PNPLA6Q8IY17 1366 aa7.07□□□□□ -1.28
CKS1B-207ENST00000477676 RXRBP28702 533 aa7.06□□□□□ -1.28
CKS1B-207ENST00000477676 VAC14Q08AM6 782 aa7.06□□□□□ -1.28
CKS1B-207ENST00000477676 WFDC12Q8WWY7 111 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms