RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 KINO60870 393 aaKnown RBP12.21□□□□□ -0.45
ABCF1-205ENST00000475993 GLRX3O76003 335 aaKnown RBP12.21□□□□□ -0.45
ABCF1-205ENST00000475993 CALRP27797 417 aaKnown RBP12.21□□□□□ -0.45
ABCF1-205ENST00000475993 EDC4Q6P2E9 1401 aaKnown RBP12.21□□□□□ -0.45
ABCF1-205ENST00000475993 CCDC73Q6ZRK6 1079 aa12.21□□□□□ -0.45
ABCF1-205ENST00000475993 NRKQ7Z2Y5 1582 aa12.21□□□□□ -0.45
ABCF1-205ENST00000475993 MAP4K1Q92918 833 aa12.21□□□□□ -0.45
ABCF1-205ENST00000475993 POGZQ7Z3K3 1410 aa12.21□□□□□ -0.45
ABCF1-205ENST00000475993 TTC36A6NLP5 189 aa12.21□□□□□ -0.45
ABCF1-205ENST00000475993 H0YHG0 523 aa12.21□□□□□ -0.45
ABCF1-205ENST00000475993 CPP00450 1065 aa12.21□□□□□ -0.45
ABCF1-205ENST00000475993 SARNPP82979 210 aaKnown RBP12.21□□□□□ -0.45
ABCF1-205ENST00000475993 FAM160A1Q05DH4 1040 aa12.21□□□□□ -0.45
ABCF1-205ENST00000475993 RRS1Q15050 365 aaKnown RBP12.21□□□□□ -0.45
ABCF1-205ENST00000475993 FOXR1Q6PIV2 292 aa12.21□□□□□ -0.45
ABCF1-205ENST00000475993 MMS22LQ6ZRQ5 1243 aa12.21□□□□□ -0.45
ABCF1-205ENST00000475993 NME9Q86XW9 330 aa12.21□□□□□ -0.45
ABCF1-205ENST00000475993 MSL3Q8N5Y2 521 aaKnown RBP12.21□□□□□ -0.45
ABCF1-205ENST00000475993 MIS18AQ9NYP9 233 aa12.21□□□□□ -0.45
ABCF1-205ENST00000475993 SIGLEC1Q9BZZ2 1709 aa12.21□□□□□ -0.46
ABCF1-205ENST00000475993 PXDNLA1KZ92 1463 aa12.21□□□□□ -0.46
ABCF1-205ENST00000475993 CCDC196A0A1B0GTZ2 297 aa12.2□□□□□ -0.46
ABCF1-205ENST00000475993 SLC27A2O14975 620 aa12.2□□□□□ -0.46
ABCF1-205ENST00000475993 UBTFL1P0CB47 393 aaPredicted RBP12.2□□□□□ -0.46
ABCF1-205ENST00000475993 RPS6KB1P23443 525 aa12.2□□□□□ -0.46
ABCF1-205ENST00000475993 TTC19Q6DKK2 380 aaPredicted RBP12.2□□□□□ -0.46
ABCF1-205ENST00000475993 PPP1R42Q7Z4L9 355 aa12.2□□□□□ -0.46
ABCF1-205ENST00000475993 FCHSD1Q86WN1 690 aa12.2□□□□□ -0.46
ABCF1-205ENST00000475993 BRF1Q92994 677 aa12.2□□□□□ -0.46
ABCF1-205ENST00000475993 STK31Q9BXU1 1019 aa12.2□□□□□ -0.46
ABCF1-205ENST00000475993 MKRN1Q9UHC7 482 aaKnown RBP12.2□□□□□ -0.46
ABCF1-205ENST00000475993 MRFAP1Q9Y605 127 aa12.2□□□□□ -0.46
ABCF1-205ENST00000475993 PPP2R3AQ06190 1150 aa12.2□□□□□ -0.46
ABCF1-205ENST00000475993 APOBRQ0VD83 1088 aa12.2□□□□□ -0.46
ABCF1-205ENST00000475993 BRD3Q15059 726 aa12.2□□□□□ -0.46
ABCF1-205ENST00000475993 SULT6B1Q6IMI4 303 aa12.2□□□□□ -0.46
ABCF1-205ENST00000475993 BLOC1S2Q6QNY1 142 aa12.2□□□□□ -0.46
ABCF1-205ENST00000475993 ZNF513Q8N8E2 541 aaPredicted RBP12.2□□□□□ -0.46
ABCF1-205ENST00000475993 CEP89Q96ST8 783 aa12.2□□□□□ -0.46
ABCF1-205ENST00000475993 MYH15Q9Y2K3 1946 aa12.2□□□□□ -0.46
ABCF1-205ENST00000475993 VWA3AA6NCI4 1184 aa12.2□□□□□ -0.46
ABCF1-205ENST00000475993 JAK2O60674 1132 aa12.2□□□□□ -0.46
ABCF1-205ENST00000475993 VPS18Q9P253 973 aa12.2□□□□□ -0.46
ABCF1-205ENST00000475993 ZRANB1Q9UGI0 708 aa12.2□□□□□ -0.46
ABCF1-205ENST00000475993 TXLNAP40222 546 aa12.19□□□□□ -0.46
ABCF1-205ENST00000475993 HNRNPLLQ8WVV9 542 aaKnown RBP12.19□□□□□ -0.46
ABCF1-205ENST00000475993 DDX11Q96FC9 970 aa12.19□□□□□ -0.46
ABCF1-205ENST00000475993 FAM208AQ9UK61 1670 aaKnown RBP12.19□□□□□ -0.46
ABCF1-205ENST00000475993 MNAT1P51948 309 aa12.19□□□□□ -0.46
ABCF1-205ENST00000475993 GNL2Q13823 731 aaKnown RBP12.19□□□□□ -0.46
ABCF1-205ENST00000475993 NBPF6Q5VWK0 638 aa12.19□□□□□ -0.46
ABCF1-205ENST00000475993 NBPF5PQ86XG9 351 aaPredicted RBP12.19□□□□□ -0.46
ABCF1-205ENST00000475993 JMYQ8N9B5 988 aa12.19□□□□□ -0.46
ABCF1-205ENST00000475993 NBPF4Q96M43 638 aa12.19□□□□□ -0.46
ABCF1-205ENST00000475993 TCEANC2Q96MN5 208 aa12.19□□□□□ -0.46
ABCF1-205ENST00000475993 SNRKQ9NRH2 765 aa12.19□□□□□ -0.46
ABCF1-205ENST00000475993 TSPYL4Q9UJ04 414 aa12.19□□□□□ -0.46
ABCF1-205ENST00000475993 SRGAP3O43295 1099 aa12.18□□□□□ -0.46
ABCF1-205ENST00000475993 CEBPZQ03701 1054 aaKnown RBP12.18□□□□□ -0.46
ABCF1-205ENST00000475993 STK3Q13188 491 aa12.18□□□□□ -0.46
ABCF1-205ENST00000475993 IDI1Q13907 227 aa12.18□□□□□ -0.46
ABCF1-205ENST00000475993 DPCR1Q3MIW9 517 aa12.18□□□□□ -0.46
ABCF1-205ENST00000475993 DNAAF4Q8WXU2 420 aa12.18□□□□□ -0.46
ABCF1-205ENST00000475993 GOLGA1Q92805 767 aa12.18□□□□□ -0.46
ABCF1-205ENST00000475993 ERCC4Q92889 916 aaPredicted RBP12.18□□□□□ -0.46
ABCF1-205ENST00000475993 PDE11AQ9HCR9 933 aa12.18□□□□□ -0.46
ABCF1-205ENST00000475993 NPHP4O75161 1426 aaPredicted RBP12.18□□□□□ -0.46
ABCF1-205ENST00000475993 ZSCAN12O43309 604 aa12.18□□□□□ -0.46
ABCF1-205ENST00000475993 NCAPHQ15003 741 aa12.18□□□□□ -0.46
ABCF1-205ENST00000475993 ZKSCAN8Q15776 578 aaPredicted RBP12.18□□□□□ -0.46
ABCF1-205ENST00000475993 H3BQV1 296 aa12.17□□□□□ -0.46
ABCF1-205ENST00000475993 EIF4A2Q14240 407 aaKnown RBP12.17□□□□□ -0.46
ABCF1-205ENST00000475993 BEND6Q5SZJ8 279 aaPredicted RBP12.17□□□□□ -0.46
ABCF1-205ENST00000475993 IFFO2Q5TF58 517 aa12.17□□□□□ -0.46
ABCF1-205ENST00000475993 FMR1NBQ8N0W7 255 aaPredicted RBP12.17□□□□□ -0.46
ABCF1-205ENST00000475993 WDR24Q96S15 920 aa12.17□□□□□ -0.46
ABCF1-205ENST00000475993 UTP14AQ9BVJ6 771 aaKnown RBP12.17□□□□□ -0.46
ABCF1-205ENST00000475993 FTOQ9C0B1 505 aaKnown RBP eCLIP12.17□□□□□ -0.46
ABCF1-205ENST00000475993 TRDNQ13061 729 aa12.17□□□□□ -0.46
ABCF1-205ENST00000475993 NAIF1Q69YI7 327 aaPredicted RBP12.17□□□□□ -0.46
ABCF1-205ENST00000475993 FSIP1Q8NA03 581 aa12.17□□□□□ -0.46
ABCF1-205ENST00000475993 FBXW7Q969H0 707 aa12.17□□□□□ -0.46
ABCF1-205ENST00000475993 SLC24A3Q9HC58 644 aa12.17□□□□□ -0.46
ABCF1-205ENST00000475993 DLC1Q96QB1 1528 aa12.17□□□□□ -0.46
ABCF1-205ENST00000475993 CACNA1FO60840 1977 aa12.16□□□□□ -0.46
ABCF1-205ENST00000475993 KLHL33A6NCF5 533 aa12.16□□□□□ -0.46
ABCF1-205ENST00000475993 USP5P45974 858 aa12.16□□□□□ -0.46
ABCF1-205ENST00000475993 CCDC30Q5VVM6 783 aa12.16□□□□□ -0.46
ABCF1-205ENST00000475993 ATL3Q6DD88 541 aa12.16□□□□□ -0.46
ABCF1-205ENST00000475993 LRRC31Q6UY01 552 aa12.16□□□□□ -0.46
ABCF1-205ENST00000475993 EFCAB13Q8IY85 973 aa12.16□□□□□ -0.46
ABCF1-205ENST00000475993 PRPF38AQ8NAV1 312 aaKnown RBP12.16□□□□□ -0.46
ABCF1-205ENST00000475993 KIFC2Q96AC6 838 aa12.16□□□□□ -0.46
ABCF1-205ENST00000475993 COG3Q96JB2 828 aa12.16□□□□□ -0.46
ABCF1-205ENST00000475993 KIAA1468Q9P260 1216 aa12.16□□□□□ -0.46
ABCF1-205ENST00000475993 PPP2R2CQ9Y2T4 447 aa12.16□□□□□ -0.46
ABCF1-205ENST00000475993 HDXQ7Z353 690 aa12.16□□□□□ -0.46
ABCF1-205ENST00000475993 TMEM139Q8IV31 216 aa12.16□□□□□ -0.46
ABCF1-205ENST00000475993 EVI5LQ96CN4 794 aa12.16□□□□□ -0.46
ABCF1-205ENST00000475993 USP28Q96RU2 1077 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms