RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 A0A1W2PRU2 124 aa7.24□□□□□ -1.25
ECHDC1-215ENST00000475319 KLHL33A6NCF5 533 aa7.24□□□□□ -1.25
ECHDC1-215ENST00000475319 GPR182O15218 404 aa7.24□□□□□ -1.25
ECHDC1-215ENST00000475319 CTAGE5O15320 804 aa7.24□□□□□ -1.25
ECHDC1-215ENST00000475319 MYBPC2Q14324 1141 aa7.24□□□□□ -1.25
ECHDC1-215ENST00000475319 INTS6LQ5JSJ4 861 aaKnown RBP7.24□□□□□ -1.25
ECHDC1-215ENST00000475319 ICE2Q659A1 982 aa7.24□□□□□ -1.25
ECHDC1-215ENST00000475319 SPTY2D1Q68D10 685 aaPredicted RBP7.24□□□□□ -1.25
ECHDC1-215ENST00000475319 TMC4Q7Z404 712 aa7.24□□□□□ -1.25
ECHDC1-215ENST00000475319 DMRTB1Q96MA1 342 aa7.24□□□□□ -1.25
ECHDC1-215ENST00000475319 ESF1Q9H501 851 aaKnown RBP7.24□□□□□ -1.25
ECHDC1-215ENST00000475319 NUB1Q9Y5A7 615 aa7.24□□□□□ -1.25
ECHDC1-215ENST00000475319 ADAMTS12P58397 1594 aa7.24□□□□□ -1.25
ECHDC1-215ENST00000475319 PRG4Q92954 1404 aaPredicted RBP7.23□□□□□ -1.25
ECHDC1-215ENST00000475319 RNF123Q5XPI4 1314 aa7.23□□□□□ -1.25
ECHDC1-215ENST00000475319 TTLL8A6PVC2 850 aa7.23□□□□□ -1.25
ECHDC1-215ENST00000475319 MPHOSPH10O00566 681 aaKnown RBP7.23□□□□□ -1.25
ECHDC1-215ENST00000475319 TNFRSF10BO14763 440 aa7.23□□□□□ -1.25
ECHDC1-215ENST00000475319 SORBS3O60504 671 aa7.23□□□□□ -1.25
ECHDC1-215ENST00000475319 GUCY2CP25092 1073 aa7.23□□□□□ -1.25
ECHDC1-215ENST00000475319 ERVK-9P63128 1117 aa7.23□□□□□ -1.25
ECHDC1-215ENST00000475319 DAB2P98082 770 aa7.23□□□□□ -1.25
ECHDC1-215ENST00000475319 FANCCQ00597 558 aa7.23□□□□□ -1.25
ECHDC1-215ENST00000475319 TBCELQ5QJ74 424 aa7.23□□□□□ -1.25
ECHDC1-215ENST00000475319 COX20Q5RI15 118 aa7.23□□□□□ -1.25
ECHDC1-215ENST00000475319 ARMCX6Q7L4S7 300 aa7.23□□□□□ -1.25
ECHDC1-215ENST00000475319 ITPKCQ96DU7 683 aa7.23□□□□□ -1.25
ECHDC1-215ENST00000475319 TINF2Q9BSI4 451 aa7.23□□□□□ -1.25
ECHDC1-215ENST00000475319 TANGO6Q9C0B7 1094 aa7.23□□□□□ -1.25
ECHDC1-215ENST00000475319 OSBPL3Q9H4L5 887 aa7.23□□□□□ -1.25
ECHDC1-215ENST00000475319 GRPEL1Q9HAV7 217 aa7.23□□□□□ -1.25
ECHDC1-215ENST00000475319 STIM2Q9P246 746 aa7.23□□□□□ -1.25
ECHDC1-215ENST00000475319 STK26Q9P289 416 aa7.23□□□□□ -1.25
ECHDC1-215ENST00000475319 VTI1BQ9UEU0 232 aa7.23□□□□□ -1.25
ECHDC1-215ENST00000475319 TOP2BQ02880 1626 aa7.23□□□□□ -1.25
ECHDC1-215ENST00000475319 CEP170Q5SW79 1584 aa7.23□□□□□ -1.25
ECHDC1-215ENST00000475319 SLC35F4A4IF30 521 aa7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 WASLO00401 505 aaPredicted RBP7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 PPP1R12BO60237 982 aaPredicted RBP7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 INHAP05111 366 aa7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 CAPN2P17655 700 aa7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 NOP2P46087 812 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 HMGN5P82970 282 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 CBX1P83916 185 aa7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 HNRNPUQ00839 825 aaKnown RBP eCLIP7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 PSMD2Q13200 908 aa7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 ALKBH2Q6NS38 261 aa7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 EP400NLQ6ZTU2 488 aa7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 DPH6Q7L8W6 267 aa7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 MEIOBQ8N635 442 aa7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 PPP1R9BQ96SB3 815 aa7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 FAM129BQ96TA1 746 aa7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 TSEN34Q9BSV6 310 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 SEMA6BQ9H3T3 888 aa7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 ANAPC4Q9UJX5 808 aa7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 IGF1RP08069 1367 aa7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 LRCH2Q5VUJ6 765 aa7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 VASH1Q7L8A9 365 aaPredicted RBP7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 RPAINQ86UA6 219 aa7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 SDR16C5Q8N3Y7 309 aa7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 JMYQ8N9B5 988 aa7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 RNF34Q969K3 372 aa7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 UPF2Q9HAU5 1272 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 ETNK1Q9HBU6 452 aa7.22□□□□□ -1.25
ECHDC1-215ENST00000475319 BIVM-ERCC5R4GMW8 1640 aa7.21□□□□□ -1.26
ECHDC1-215ENST00000475319 IPO7O95373 1038 aaKnown RBP7.21□□□□□ -1.26
ECHDC1-215ENST00000475319 BCRP11274 1271 aa7.21□□□□□ -1.26
ECHDC1-215ENST00000475319 GTF2F1P35269 517 aaKnown RBP eCLIP7.21□□□□□ -1.26
ECHDC1-215ENST00000475319 PDE3BQ13370 1112 aa7.21□□□□□ -1.26
ECHDC1-215ENST00000475319 ZRSR2Q15696 482 aaKnown RBP7.21□□□□□ -1.26
ECHDC1-215ENST00000475319 RGL3Q3MIN7 710 aa7.21□□□□□ -1.26
ECHDC1-215ENST00000475319 GIMAP6Q6P9H5 292 aa7.21□□□□□ -1.26
ECHDC1-215ENST00000475319 ATCAYQ86WG3 371 aa7.21□□□□□ -1.26
ECHDC1-215ENST00000475319 C2orf49Q9BVC5 232 aaPredicted RBP7.21□□□□□ -1.26
ECHDC1-215ENST00000475319 PANK2Q9BZ23 570 aa7.21□□□□□ -1.26
ECHDC1-215ENST00000475319 TGIF2Q9GZN2 237 aa7.21□□□□□ -1.26
ECHDC1-215ENST00000475319 SUDS3Q9H7L9 328 aaPredicted RBP7.21□□□□□ -1.26
ECHDC1-215ENST00000475319 CYLDQ9NQC7 956 aa7.21□□□□□ -1.26
ECHDC1-215ENST00000475319 METTL5Q9NRN9 209 aaKnown RBP7.21□□□□□ -1.26
ECHDC1-215ENST00000475319 TMPRSS4Q9NRS4 437 aa7.21□□□□□ -1.26
ECHDC1-215ENST00000475319 PAXBP1Q9Y5B6 917 aa7.21□□□□□ -1.26
ECHDC1-215ENST00000475319 GOLGA6L6A8MZA4 724 aa7.2□□□□□ -1.26
ECHDC1-215ENST00000475319 GOLGA6L22H0YM25 854 aa7.2□□□□□ -1.26
ECHDC1-215ENST00000475319 ZBTB39O15060 712 aa7.2□□□□□ -1.26
ECHDC1-215ENST00000475319 IPO8O15397 1037 aaKnown RBP7.2□□□□□ -1.26
ECHDC1-215ENST00000475319 COQ9O75208 318 aa7.2□□□□□ -1.26
ECHDC1-215ENST00000475319 ATP2B2Q01814 1243 aa7.2□□□□□ -1.26
ECHDC1-215ENST00000475319 NR5A1Q13285 461 aa7.2□□□□□ -1.26
ECHDC1-215ENST00000475319 UVSSAQ2YD98 709 aa7.2□□□□□ -1.26
ECHDC1-215ENST00000475319 C11orf91Q3C1V1 193 aa7.2□□□□□ -1.26
ECHDC1-215ENST00000475319 FAM26DQ5JW98 314 aa7.2□□□□□ -1.26
ECHDC1-215ENST00000475319 CCDC91Q7Z6B0 441 aa7.2□□□□□ -1.26
ECHDC1-215ENST00000475319 SLC9A9Q8IVB4 645 aa7.2□□□□□ -1.26
ECHDC1-215ENST00000475319 PDCL2Q8N4E4 241 aa7.2□□□□□ -1.26
ECHDC1-215ENST00000475319 MYRIPQ8NFW9 859 aa7.2□□□□□ -1.26
ECHDC1-215ENST00000475319 ALKBH8Q96BT7 664 aaKnown RBP7.2□□□□□ -1.26
ECHDC1-215ENST00000475319 SLC4A9Q96Q91 983 aa7.2□□□□□ -1.26
ECHDC1-215ENST00000475319 NIF3L1Q9GZT8 377 aa7.2□□□□□ -1.26
ECHDC1-215ENST00000475319 CCSER2Q9H7U1 834 aa7.2□□□□□ -1.26
ECHDC1-215ENST00000475319 QTRT2Q9H974 415 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms