RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 ZNF646O15015 1829 aaPredicted RBP20.24■□□□□ 0.83
SRM-204ENST00000475189 SRGAP3O43295 1099 aa20.23■□□□□ 0.83
SRM-204ENST00000475189 EPS15P42566 896 aa20.23■□□□□ 0.83
SRM-204ENST00000475189 GMPSP49915 693 aaPredicted RBP20.23■□□□□ 0.83
SRM-204ENST00000475189 COPRSQ9NQ92 184 aa20.23■□□□□ 0.83
SRM-204ENST00000475189 FBXO3Q9UK99 471 aa20.23■□□□□ 0.83
SRM-204ENST00000475189 PA2G4Q9UQ80 394 aaKnown RBP20.23■□□□□ 0.83
SRM-204ENST00000475189 VIL1P09327 827 aaKnown RBP20.22■□□□□ 0.83
SRM-204ENST00000475189 LMOD1P29536 600 aaPredicted RBP20.22■□□□□ 0.83
SRM-204ENST00000475189 EPHX2P34913 555 aa20.22■□□□□ 0.83
SRM-204ENST00000475189 MVPQ14764 893 aaKnown RBP20.22■□□□□ 0.83
SRM-204ENST00000475189 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.22■□□□□ 0.83
SRM-204ENST00000475189 SIL1Q9H173 461 aa20.22■□□□□ 0.83
SRM-204ENST00000475189 C1orf115Q9H7X2 142 aa20.22■□□□□ 0.83
SRM-204ENST00000475189 GPRC5DQ9NZD1 345 aa20.22■□□□□ 0.83
SRM-204ENST00000475189 COG6Q9Y2V7 657 aa20.22■□□□□ 0.83
SRM-204ENST00000475189 ZBTB12Q9Y330 459 aaPredicted RBP20.22■□□□□ 0.83
SRM-204ENST00000475189 PNMA6EA0A0J9YXQ4 647 aa20.21■□□□□ 0.83
SRM-204ENST00000475189 CIAO1O76071 339 aa20.21■□□□□ 0.83
SRM-204ENST00000475189 PDE8BO95263 885 aa20.21■□□□□ 0.83
SRM-204ENST00000475189 POTEIP0CG38 1075 aa20.21■□□□□ 0.83
SRM-204ENST00000475189 POTEJP0CG39 1038 aa20.21■□□□□ 0.83
SRM-204ENST00000475189 C20orf194Q5TEA3 1177 aa20.21■□□□□ 0.83
SRM-204ENST00000475189 ATP8B2P98198 1209 aa20.2■□□□□ 0.82
SRM-204ENST00000475189 PDE3AQ14432 1141 aa20.2■□□□□ 0.82
SRM-204ENST00000475189 CD209Q9NNX6 404 aa20.2■□□□□ 0.82
SRM-204ENST00000475189 ADAMTSL1Q8N6G6 1762 aa20.2■□□□□ 0.82
SRM-204ENST00000475189 USP17L3A6NCW0 530 aa20.19■□□□□ 0.82
SRM-204ENST00000475189 USP17L4A6NCW7 530 aa20.19■□□□□ 0.82
SRM-204ENST00000475189 USP17L1Q7RTZ2 530 aa20.19■□□□□ 0.82
SRM-204ENST00000475189 ZNF804AQ7Z570 1209 aa20.19■□□□□ 0.82
SRM-204ENST00000475189 DPF2Q92785 391 aa20.19■□□□□ 0.82
SRM-204ENST00000475189 CNOT7Q9UIV1 285 aaKnown RBP20.19■□□□□ 0.82
SRM-204ENST00000475189 FGFR2P21802 821 aa20.18■□□□□ 0.82
SRM-204ENST00000475189 RPS12P25398 132 aaKnown RBP20.18■□□□□ 0.82
SRM-204ENST00000475189 IL15P40933 162 aaPredicted RBP20.18■□□□□ 0.82
SRM-204ENST00000475189 FSTL1Q12841 308 aa20.18■□□□□ 0.82
SRM-204ENST00000475189 POLA2Q14181 598 aa20.18■□□□□ 0.82
SRM-204ENST00000475189 EAPPQ56P03 285 aaPredicted RBP20.18■□□□□ 0.82
SRM-204ENST00000475189 RSBN1LQ6PCB5 846 aaPredicted RBP20.18■□□□□ 0.82
SRM-204ENST00000475189 PNMA8AQ86V59 439 aaPredicted RBP20.18■□□□□ 0.82
SRM-204ENST00000475189 SMC1BQ8NDV3 1235 aa20.18■□□□□ 0.82
SRM-204ENST00000475189 FAM84BQ96KN1 310 aaPredicted RBP20.18■□□□□ 0.82
SRM-204ENST00000475189 DDX19BQ9UMR2 479 aa20.18■□□□□ 0.82
SRM-204ENST00000475189 SHTN1A0MZ66 631 aa20.17■□□□□ 0.82
SRM-204ENST00000475189 IL1R1P14778 569 aa20.17■□□□□ 0.82
SRM-204ENST00000475189 GYG1P46976 350 aa20.17■□□□□ 0.82
SRM-204ENST00000475189 DACT2Q5SW24 774 aa20.17■□□□□ 0.82
SRM-204ENST00000475189 SSH3Q8TE77 659 aa20.17■□□□□ 0.82
SRM-204ENST00000475189 GMLQ99445 158 aa20.17■□□□□ 0.82
SRM-204ENST00000475189 ADARB2Q9NS39 739 aaKnown RBP20.17■□□□□ 0.82
SRM-204ENST00000475189 CEP126Q9P2H0 1117 aa20.17■□□□□ 0.82
SRM-204ENST00000475189 ZNF609O15014 1411 aa20.17■□□□□ 0.82
SRM-204ENST00000475189 PUM3Q15397 648 aaKnown RBP20.16■□□□□ 0.82
SRM-204ENST00000475189 STRIP1Q5VSL9 837 aa20.16■□□□□ 0.82
SRM-204ENST00000475189 CHADLQ6NUI6 762 aa20.16■□□□□ 0.82
SRM-204ENST00000475189 USP50Q70EL3 339 aaPredicted RBP20.16■□□□□ 0.82
SRM-204ENST00000475189 LDHDQ86WU2 507 aa20.16■□□□□ 0.82
SRM-204ENST00000475189 MICALL2Q8IY33 904 aa20.16■□□□□ 0.82
SRM-204ENST00000475189 AGBL3Q8NEM8 1001 aa20.16■□□□□ 0.82
SRM-204ENST00000475189 H7C1D1 291 aa20.15■□□□□ 0.82
SRM-204ENST00000475189 HIBADHP31937 336 aaKnown RBP20.15■□□□□ 0.82
SRM-204ENST00000475189 GTF2IP78347 998 aa20.15■□□□□ 0.82
SRM-204ENST00000475189 TTLL5Q6EMB2 1281 aa20.15■□□□□ 0.82
SRM-204ENST00000475189 FBXO33Q7Z6M2 555 aa20.15■□□□□ 0.82
SRM-204ENST00000475189 FBXW7Q969H0 707 aa20.15■□□□□ 0.82
SRM-204ENST00000475189 MXD3Q9BW11 206 aa20.15■□□□□ 0.82
SRM-204ENST00000475189 ZBTB40Q9NUA8 1239 aa20.15■□□□□ 0.82
SRM-204ENST00000475189 CEP350Q5VT06 3117 aa20.14■□□□□ 0.82
SRM-204ENST00000475189 IFIT1P09914 478 aaKnown RBP20.14■□□□□ 0.81
SRM-204ENST00000475189 CEP85Q6P2H3 762 aa20.14■□□□□ 0.81
SRM-204ENST00000475189 TDRD7Q8NHU6 1098 aaKnown RBP20.14■□□□□ 0.81
SRM-204ENST00000475189 LPIN2Q92539 896 aa20.14■□□□□ 0.81
SRM-204ENST00000475189 CLEC11AQ9Y240 323 aa20.14■□□□□ 0.81
SRM-204ENST00000475189 SLC5A1P13866 664 aa20.13■□□□□ 0.81
SRM-204ENST00000475189 HIRAP54198 1017 aaPredicted RBP20.13■□□□□ 0.81
SRM-204ENST00000475189 RRP1P56182 461 aaKnown RBP20.13■□□□□ 0.81
SRM-204ENST00000475189 TRPM4Q8TD43 1214 aa20.13■□□□□ 0.81
SRM-204ENST00000475189 POLR2AP24928 1970 aaKnown RBP20.12■□□□□ 0.81
SRM-204ENST00000475189 BCAMP50895 628 aa20.12■□□□□ 0.81
SRM-204ENST00000475189 TFCP2Q12800 502 aa20.12■□□□□ 0.81
SRM-204ENST00000475189 G3BP1Q13283 466 aaKnown RBP eCLIP20.12■□□□□ 0.81
SRM-204ENST00000475189 ATP2B3Q16720 1220 aa20.12■□□□□ 0.81
SRM-204ENST00000475189 CAVIN4Q5BKX8 364 aa20.12■□□□□ 0.81
SRM-204ENST00000475189 SAMD7Q7Z3H4 446 aa20.12■□□□□ 0.81
SRM-204ENST00000475189 CHMP4BQ9H444 224 aaKnown RBP20.12■□□□□ 0.81
SRM-204ENST00000475189 ARAP2Q8WZ64 1704 aa20.12■□□□□ 0.81
SRM-204ENST00000475189 MYH13Q9UKX3 1938 aa20.12■□□□□ 0.81
SRM-204ENST00000475189 MYO3BQ8WXR4 1341 aa20.11■□□□□ 0.81
SRM-204ENST00000475189 SASH1O94885 1247 aa20.11■□□□□ 0.81
SRM-204ENST00000475189 EGFRP00533 1210 aa20.11■□□□□ 0.81
SRM-204ENST00000475189 HSPA6P17066 643 aa20.11■□□□□ 0.81
SRM-204ENST00000475189 ZNF280AP59817 542 aaPredicted RBP20.11■□□□□ 0.81
SRM-204ENST00000475189 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.11■□□□□ 0.81
SRM-204ENST00000475189 FAM205AQ6ZU69 1335 aa20.1■□□□□ 0.81
SRM-204ENST00000475189 USP17L8P0C7I0 530 aa20.1■□□□□ 0.81
SRM-204ENST00000475189 TBC1D10BQ4KMP7 808 aaPredicted RBP20.1■□□□□ 0.81
SRM-204ENST00000475189 MAP1SQ66K74 1059 aaPredicted RBP20.1■□□□□ 0.81
SRM-204ENST00000475189 VPS37DQ86XT2 251 aa20.1■□□□□ 0.81
SRM-204ENST00000475189 JAG2Q9Y219 1238 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms