RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 ANKRD2Q9GZV1 360 aa9.08□□□□□ -0.96
LSAMP-203ENST00000474851 CREBZFQ9NS37 354 aa9.08□□□□□ -0.96
LSAMP-203ENST00000474851 SMC4Q9NTJ3 1288 aa9.08□□□□□ -0.96
LSAMP-203ENST00000474851 IRS2Q9Y4H2 1338 aa9.07□□□□□ -0.96
LSAMP-203ENST00000474851 TAF5LO75529 589 aa9.07□□□□□ -0.96
LSAMP-203ENST00000474851 EGFRP00533 1210 aa9.07□□□□□ -0.96
LSAMP-203ENST00000474851 RPS12P25398 132 aaKnown RBP9.07□□□□□ -0.96
LSAMP-203ENST00000474851 SAMD7Q7Z3H4 446 aa9.07□□□□□ -0.96
LSAMP-203ENST00000474851 MICALL2Q8IY33 904 aa9.07□□□□□ -0.96
LSAMP-203ENST00000474851 HELBQ8NG08 1087 aaPredicted RBP9.07□□□□□ -0.96
LSAMP-203ENST00000474851 ZC3H15Q8WU90 426 aaKnown RBP9.07□□□□□ -0.96
LSAMP-203ENST00000474851 BICC1Q9H694 974 aaKnown RBP9.07□□□□□ -0.96
LSAMP-203ENST00000474851 RIPOR2Q9Y4F9 1068 aa9.07□□□□□ -0.96
LSAMP-203ENST00000474851 ZNF804BA4D1E1 1349 aa9.06□□□□□ -0.96
LSAMP-203ENST00000474851 USP17L3A6NCW0 530 aa9.06□□□□□ -0.96
LSAMP-203ENST00000474851 USP17L4A6NCW7 530 aa9.06□□□□□ -0.96
LSAMP-203ENST00000474851 H7C1D1 291 aa9.06□□□□□ -0.96
LSAMP-203ENST00000474851 TRAF5O00463 557 aa9.06□□□□□ -0.96
LSAMP-203ENST00000474851 ZNF280AP59817 542 aaPredicted RBP9.06□□□□□ -0.96
LSAMP-203ENST00000474851 CCDC57Q2TAC2 916 aa9.06□□□□□ -0.96
LSAMP-203ENST00000474851 CST9Q5W186 159 aa9.06□□□□□ -0.96
LSAMP-203ENST00000474851 RSBN1LQ6PCB5 846 aaPredicted RBP9.06□□□□□ -0.96
LSAMP-203ENST00000474851 LDHAL6AQ6ZMR3 332 aa9.06□□□□□ -0.96
LSAMP-203ENST00000474851 C15orf52Q6ZUT6 534 aaKnown RBP9.06□□□□□ -0.96
LSAMP-203ENST00000474851 USP17L1Q7RTZ2 530 aa9.06□□□□□ -0.96
LSAMP-203ENST00000474851 ARHGAP45Q92619 1136 aa9.06□□□□□ -0.96
LSAMP-203ENST00000474851 PUS3Q9BZE2 481 aaKnown RBP9.06□□□□□ -0.96
LSAMP-203ENST00000474851 COA1Q9GZY4 146 aa9.06□□□□□ -0.96
LSAMP-203ENST00000474851 CHMP3Q9Y3E7 222 aa9.06□□□□□ -0.96
LSAMP-203ENST00000474851 MED23Q9ULK4 1368 aa9.06□□□□□ -0.96
LSAMP-203ENST00000474851 ARFGEF2Q9Y6D5 1785 aa9.06□□□□□ -0.96
LSAMP-203ENST00000474851 PCNTO95613 3336 aa9.05□□□□□ -0.96
LSAMP-203ENST00000474851 TMEM88BA6NKF7 163 aa9.05□□□□□ -0.96
LSAMP-203ENST00000474851 HNRNPUQ00839 825 aaKnown RBP eCLIP9.05□□□□□ -0.96
LSAMP-203ENST00000474851 DACT2Q5SW24 774 aa9.05□□□□□ -0.96
LSAMP-203ENST00000474851 DLK2Q6UY11 383 aa9.05□□□□□ -0.96
LSAMP-203ENST00000474851 AGBL3Q8NEM8 1001 aa9.05□□□□□ -0.96
LSAMP-203ENST00000474851 MXD3Q9BW11 206 aa9.05□□□□□ -0.96
LSAMP-203ENST00000474851 API5Q9BZZ5 524 aaKnown RBP9.05□□□□□ -0.96
LSAMP-203ENST00000474851 G3V3G9 751 aa9.04□□□□□ -0.96
LSAMP-203ENST00000474851 BCAR3O75815 825 aa9.04□□□□□ -0.96
LSAMP-203ENST00000474851 RFX5P48382 616 aaPredicted RBP9.04□□□□□ -0.96
LSAMP-203ENST00000474851 TBC1D10BQ4KMP7 808 aaPredicted RBP9.04□□□□□ -0.96
LSAMP-203ENST00000474851 LRRC24Q50LG9 513 aa9.04□□□□□ -0.96
LSAMP-203ENST00000474851 RBM26Q5T8P6 1007 aaKnown RBP9.04□□□□□ -0.96
LSAMP-203ENST00000474851 DCAF8Q5TAQ9 597 aa9.04□□□□□ -0.96
LSAMP-203ENST00000474851 STRIP1Q5VSL9 837 aa9.04□□□□□ -0.96
LSAMP-203ENST00000474851 GLIS2Q9BZE0 524 aaPredicted RBP9.04□□□□□ -0.96
LSAMP-203ENST00000474851 CD209Q9NNX6 404 aa9.04□□□□□ -0.96
LSAMP-203ENST00000474851 DDX60Q8IY21 1712 aaKnown RBP9.04□□□□□ -0.96
LSAMP-203ENST00000474851 RASSF10A6NK89 507 aa9.03□□□□□ -0.96
LSAMP-203ENST00000474851 PLIN1O60240 522 aa9.03□□□□□ -0.96
LSAMP-203ENST00000474851 USP17L8P0C7I0 530 aa9.03□□□□□ -0.96
LSAMP-203ENST00000474851 IL1R1P14778 569 aa9.03□□□□□ -0.96
LSAMP-203ENST00000474851 UBE4AQ14139 1066 aa9.03□□□□□ -0.96
LSAMP-203ENST00000474851 INTS3Q68E01 1043 aaKnown RBP9.03□□□□□ -0.96
LSAMP-203ENST00000474851 TTLL5Q6EMB2 1281 aa9.03□□□□□ -0.96
LSAMP-203ENST00000474851 CDC37L1Q7L3B6 337 aa9.03□□□□□ -0.96
LSAMP-203ENST00000474851 USP48Q86UV5 1035 aa9.03□□□□□ -0.96
LSAMP-203ENST00000474851 VGLL2Q8N8G2 317 aa9.03□□□□□ -0.96
LSAMP-203ENST00000474851 FAM84BQ96KN1 310 aaPredicted RBP9.03□□□□□ -0.96
LSAMP-203ENST00000474851 CNNM1Q9NRU3 951 aa9.03□□□□□ -0.96
LSAMP-203ENST00000474851 MKRN1Q9UHC7 482 aaKnown RBP9.03□□□□□ -0.96
LSAMP-203ENST00000474851 TNNQ9UQP3 1299 aa9.03□□□□□ -0.96
LSAMP-203ENST00000474851 ANKRD36CQ5JPF3 1778 aa9.03□□□□□ -0.96
LSAMP-203ENST00000474851 ZNF609O15014 1411 aa9.03□□□□□ -0.96
LSAMP-203ENST00000474851 ASTN2O75129 1339 aaPredicted RBP9.03□□□□□ -0.96
LSAMP-203ENST00000474851 LTBP1Q14766 1721 aa9.02□□□□□ -0.96
LSAMP-203ENST00000474851 CNTNAP1P78357 1384 aa9.02□□□□□ -0.97
LSAMP-203ENST00000474851 TRIM27P14373 513 aa9.02□□□□□ -0.97
LSAMP-203ENST00000474851 KCNJ4P48050 445 aa9.02□□□□□ -0.97
LSAMP-203ENST00000474851 VEGFBP49765 207 aa9.02□□□□□ -0.97
LSAMP-203ENST00000474851 GTF2IP78347 998 aa9.02□□□□□ -0.97
LSAMP-203ENST00000474851 PTPN12Q05209 780 aaKnown RBP9.02□□□□□ -0.97
LSAMP-203ENST00000474851 SCARF1Q14162 830 aa9.02□□□□□ -0.97
LSAMP-203ENST00000474851 KIF4BQ2VIQ3 1234 aa9.02□□□□□ -0.97
LSAMP-203ENST00000474851 TAF7LQ5H9L4 462 aa9.02□□□□□ -0.97
LSAMP-203ENST00000474851 FBXO33Q7Z6M2 555 aa9.02□□□□□ -0.97
LSAMP-203ENST00000474851 KLHDC4Q8TBB5 520 aa9.02□□□□□ -0.97
LSAMP-203ENST00000474851 MEIS3Q99687 375 aa9.02□□□□□ -0.97
LSAMP-203ENST00000474851 TIAM2Q8IVF5 1701 aa9.02□□□□□ -0.97
LSAMP-203ENST00000474851 LRRC37AA6NMS7 1700 aa9.01□□□□□ -0.97
LSAMP-203ENST00000474851 SASH1O94885 1247 aa9.01□□□□□ -0.97
LSAMP-203ENST00000474851 CELF2O95319 508 aaKnown RBP9.01□□□□□ -0.97
LSAMP-203ENST00000474851 ATF7IPQ6VMQ6 1270 aa9.01□□□□□ -0.97
LSAMP-203ENST00000474851 ATG9AQ7Z3C6 839 aa9.01□□□□□ -0.97
LSAMP-203ENST00000474851 KRT26Q7Z3Y9 468 aa9.01□□□□□ -0.97
LSAMP-203ENST00000474851 CERS5Q8N5B7 392 aa9.01□□□□□ -0.97
LSAMP-203ENST00000474851 TDRD7Q8NHU6 1098 aaKnown RBP9.01□□□□□ -0.97
LSAMP-203ENST00000474851 ZBED3Q96IU2 234 aaPredicted RBP9.01□□□□□ -0.97
LSAMP-203ENST00000474851 MYOZ2Q9NPC6 264 aa9.01□□□□□ -0.97
LSAMP-203ENST00000474851 TLL2Q9Y6L7 1015 aa9.01□□□□□ -0.97
LSAMP-203ENST00000474851 MROH5Q6ZUA9 1318 aa9.01□□□□□ -0.97
LSAMP-203ENST00000474851 CACNA1SQ13698 1873 aa9□□□□□ -0.97
LSAMP-203ENST00000474851 ADM5C9JUS6 153 aa9□□□□□ -0.97
LSAMP-203ENST00000474851 EYA2O00167 538 aa9□□□□□ -0.97
LSAMP-203ENST00000474851 IPO8O15397 1037 aaKnown RBP9□□□□□ -0.97
LSAMP-203ENST00000474851 PDE8BO95263 885 aa9□□□□□ -0.97
LSAMP-203ENST00000474851 UBTFL1P0CB47 393 aaPredicted RBP9□□□□□ -0.97
LSAMP-203ENST00000474851 PRKAR2AP13861 404 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms