RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 PI4KAP1Q8N8J0 262 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 IMPG2Q9BZV3 1241 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 DEF6Q9H4E7 631 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 BCS1LQ9Y276 419 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 TSPOAP1O95153 1857 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 FDX1P10109 184 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 ANAPC15P60006 121 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 TTLL7Q6ZT98 887 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 C2orf69Q8N8R5 385 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 SPATA32Q96LK8 384 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 NBPF3Q9H094 633 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 SWAP70Q9UH65 585 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 MTMR7Q9Y216 660 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 RBM19Q9Y4C8 960 aaKnown RBP5.32□□□□□ -1.56
CCNL1-215ENST00000474539 GOLIM4O00461 696 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 PRIM1P49642 420 aaKnown RBP5.32□□□□□ -1.56
CCNL1-215ENST00000474539 ATP8B2P98198 1209 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 GNPTABQ3T906 1256 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 RSPH3Q86UC2 560 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 PPFIBP1Q86W92 1011 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 ORAI2Q96SN7 254 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 PLVAPQ9BX97 442 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 ARGLU1Q9NWB6 273 aaPredicted RBP5.32□□□□□ -1.56
CCNL1-215ENST00000474539 ZNF219Q9P2Y4 722 aaPredicted RBP5.32□□□□□ -1.56
CCNL1-215ENST00000474539 KDM5AP29375 1690 aaKnown RBP5.32□□□□□ -1.56
CCNL1-215ENST00000474539 STX6O43752 255 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 IARSP41252 1262 aaKnown RBP5.32□□□□□ -1.56
CCNL1-215ENST00000474539 DNM2P50570 870 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 DCTN1Q14203 1278 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 TEX11Q8IYF3 940 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 TSR2Q969E8 191 aaKnown RBP5.32□□□□□ -1.56
CCNL1-215ENST00000474539 RUFY1Q96T51 708 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 XDHP47989 1333 aa5.32□□□□□ -1.56
CCNL1-215ENST00000474539 IBTKQ9P2D0 1353 aaPredicted RBP5.32□□□□□ -1.56
CCNL1-215ENST00000474539 PRC1O43663 620 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 NEK4P51957 841 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 NAP1L1P55209 391 aaKnown RBP5.31□□□□□ -1.56
CCNL1-215ENST00000474539 UBE4AQ14139 1066 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 TMEM67Q5HYA8 995 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 IFIT1BQ5T764 474 aaKnown RBP5.31□□□□□ -1.56
CCNL1-215ENST00000474539 ATL3Q6DD88 541 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 APOBEC3FQ8IUX4 373 aaKnown RBP5.31□□□□□ -1.56
CCNL1-215ENST00000474539 SLC17A8Q8NDX2 589 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 EXOC4Q96A65 974 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 MASTLQ96GX5 879 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 EXOC7Q9UPT5 735 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 PTPRMP28827 1452 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 EYA2O00167 538 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 PHKG2P15735 406 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 LTKP29376 864 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 PRPHP41219 470 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 SLC8A3P57103 927 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 RPS8P62241 208 aaKnown RBP5.31□□□□□ -1.56
CCNL1-215ENST00000474539 IFI16Q16666 785 aaKnown RBP5.31□□□□□ -1.56
CCNL1-215ENST00000474539 GIGYF2Q6Y7W6 1299 aaKnown RBP5.31□□□□□ -1.56
CCNL1-215ENST00000474539 BARGINQ6ZT62 677 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 ARHGEF25Q86VW2 580 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 TTLL6Q8N841 843 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 PKNOX2Q96KN3 472 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 RPAP1Q9BWH6 1393 aaPredicted RBP5.31□□□□□ -1.56
CCNL1-215ENST00000474539 ZSCAN16Q9H4T2 348 aaPredicted RBP5.31□□□□□ -1.56
CCNL1-215ENST00000474539 GINM1Q9NU53 330 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 ARPP21Q9UBL0 812 aaPredicted RBP5.31□□□□□ -1.56
CCNL1-215ENST00000474539 TPCN1Q9ULQ1 816 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 MYO3AQ8NEV4 1616 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 PCCAP05165 728 aaPredicted RBP5.31□□□□□ -1.56
CCNL1-215ENST00000474539 ECE1P42892 770 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 RARSP54136 660 aaKnown RBP5.31□□□□□ -1.56
CCNL1-215ENST00000474539 NBR1Q14596 966 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 LARP1BQ659C4 914 aaKnown RBP5.31□□□□□ -1.56
CCNL1-215ENST00000474539 PANK1Q8TE04 598 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 C8orf76Q96K31 380 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 GJD4Q96KN9 370 aaPredicted RBP5.31□□□□□ -1.56
CCNL1-215ENST00000474539 MBIPQ9NS73 344 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 ATG3Q9NT62 314 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 SLC4A4Q9Y6R1 1079 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 RGS12O14924 1447 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 ERBB3P21860 1342 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 LOC102724428A0A0B4J2F2 783 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 PDE4AP27815 886 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 SIK1P57059 783 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 MCMDC2Q4G0Z9 681 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 EXOC6Q8TAG9 804 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 TMEM87BQ96K49 555 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 JAKMIP1Q96N16 626 aaKnown RBP5.31□□□□□ -1.56
CCNL1-215ENST00000474539 IWS1Q96ST2 819 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 CCDC94Q9BW85 323 aaPredicted RBP5.31□□□□□ -1.56
CCNL1-215ENST00000474539 DHX36Q9H2U1 1008 aaKnown RBP5.31□□□□□ -1.56
CCNL1-215ENST00000474539 ZHX3Q9H4I2 956 aa5.31□□□□□ -1.56
CCNL1-215ENST00000474539 RNF17Q9BXT8 1623 aaKnown RBP5.3□□□□□ -1.56
CCNL1-215ENST00000474539 USP6P35125 1406 aa5.3□□□□□ -1.56
CCNL1-215ENST00000474539 hCG_1984214I3L0E3 225 aa5.3□□□□□ -1.56
CCNL1-215ENST00000474539 RNF113AO15541 343 aaKnown RBP5.3□□□□□ -1.56
CCNL1-215ENST00000474539 RPS6KA4O75676 772 aa5.3□□□□□ -1.56
CCNL1-215ENST00000474539 KRT13P13646 458 aa5.3□□□□□ -1.56
CCNL1-215ENST00000474539 TAF12Q16514 161 aa5.3□□□□□ -1.56
CCNL1-215ENST00000474539 MTHFSDQ2M296 383 aaKnown RBP5.3□□□□□ -1.56
CCNL1-215ENST00000474539 RC3H1Q5TC82 1133 aaKnown RBP5.3□□□□□ -1.56
CCNL1-215ENST00000474539 LMBR1LQ6UX01 489 aa5.3□□□□□ -1.56
CCNL1-215ENST00000474539 GABPB2Q8TAK5 448 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms