RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 TIMP2P16035 220 aa6.22□□□□□ -1.41
TMEM39A-206ENST00000473684 ZNF445P59923 1031 aa6.22□□□□□ -1.41
TMEM39A-206ENST00000473684 TAGLNQ01995 201 aaKnown RBP6.22□□□□□ -1.41
TMEM39A-206ENST00000473684 TERF2Q15554 542 aa6.22□□□□□ -1.41
TMEM39A-206ENST00000473684 FAM26DQ5JW98 314 aa6.22□□□□□ -1.41
TMEM39A-206ENST00000473684 KIDINS220Q9ULH0 1771 aa6.22□□□□□ -1.41
TMEM39A-206ENST00000473684 A0A0G2JS52 829 aa6.21□□□□□ -1.41
TMEM39A-206ENST00000473684 MEN1O00255 615 aa6.21□□□□□ -1.41
TMEM39A-206ENST00000473684 NDUFB5O43674 189 aa6.21□□□□□ -1.41
TMEM39A-206ENST00000473684 KIF1CO43896 1103 aaKnown RBP6.21□□□□□ -1.41
TMEM39A-206ENST00000473684 NOP2P46087 812 aaKnown RBP6.21□□□□□ -1.41
TMEM39A-206ENST00000473684 WDR4P57081 412 aaKnown RBP6.21□□□□□ -1.41
TMEM39A-206ENST00000473684 ALKBH2Q6NS38 261 aa6.21□□□□□ -1.41
TMEM39A-206ENST00000473684 NLRP3Q96P20 1036 aa6.21□□□□□ -1.41
TMEM39A-206ENST00000473684 CITED4Q96RK1 184 aa6.21□□□□□ -1.41
TMEM39A-206ENST00000473684 SLC26A8Q96RN1 970 aa6.21□□□□□ -1.41
TMEM39A-206ENST00000473684 V9GY48 417 aaPredicted RBP6.21□□□□□ -1.41
TMEM39A-206ENST00000473684 POGZQ7Z3K3 1410 aa6.21□□□□□ -1.42
TMEM39A-206ENST00000473684 ABCA6Q8N139 1617 aa6.21□□□□□ -1.42
TMEM39A-206ENST00000473684 ABCC1P33527 1531 aa6.21□□□□□ -1.42
TMEM39A-206ENST00000473684 GDF9O60383 454 aa6.21□□□□□ -1.42
TMEM39A-206ENST00000473684 SYCP1Q15431 976 aa6.21□□□□□ -1.42
TMEM39A-206ENST00000473684 ICE2Q659A1 982 aa6.21□□□□□ -1.42
TMEM39A-206ENST00000473684 L3MBTL2Q969R5 705 aa6.21□□□□□ -1.42
TMEM39A-206ENST00000473684 NGLY1Q96IV0 654 aa6.21□□□□□ -1.42
TMEM39A-206ENST00000473684 CCDC87Q9NVE4 849 aa6.21□□□□□ -1.42
TMEM39A-206ENST00000473684 ATP10BO94823 1461 aa6.21□□□□□ -1.42
TMEM39A-206ENST00000473684 NCOA3Q9Y6Q9 1424 aa6.21□□□□□ -1.42
TMEM39A-206ENST00000473684 PTPN23Q9H3S7 1636 aa6.21□□□□□ -1.42
TMEM39A-206ENST00000473684 IGSF3O75054 1194 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 ALDH16A1Q8IZ83 802 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 RBM28Q9NW13 759 aaKnown RBP6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 CABP1Q9NZU7 370 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 ARHGAP31Q2M1Z3 1444 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 C9orf84Q5VXU9 1444 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 INSRP06213 1382 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 CPS1P31327 1500 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 KIF16BQ96L93 1317 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 ZBTB39O15060 712 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 RELBQ01201 579 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 KLHL40Q2TBA0 621 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 CT47A1Q5JQC4 288 aaPredicted RBP6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 NBPF11Q86T75 865 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 ABTB2Q8N961 1025 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 PRKD2Q9BZL6 878 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 TOR4AQ9NXH8 423 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 ZNF232Q9UNY5 417 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 CD109Q6YHK3 1445 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 KDM5DQ9BY66 1539 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 TTC24A2A3L6 582 aaPredicted RBP6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 GOLGA6L22H0YM25 854 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 TREHO43280 583 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 VAMP1P23763 118 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 GUCY2CP25092 1073 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 U2AF2P26368 475 aaKnown RBP eCLIP6.2□□□□□ -1.422e-7■□□□□ 10.1
TMEM39A-206ENST00000473684 MAP2K1Q02750 393 aaPredicted RBP6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 RTN1Q16799 776 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 MNS1Q8NEH6 495 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 ZSCAN10Q96SZ4 725 aaPredicted RBP6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 RASSF4Q9H2L5 321 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 ZNF395Q9H8N7 513 aaPredicted RBP6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 DIAPH3Q9NSV4 1193 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 DONSONQ9NYP3 566 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 HCN4Q9Y3Q4 1203 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 PARP3Q9Y6F1 533 aa6.2□□□□□ -1.42
TMEM39A-206ENST00000473684 DHX29Q7Z478 1369 aaKnown RBP6.19□□□□□ -1.42
TMEM39A-206ENST00000473684 LAMC1P11047 1609 aa6.19□□□□□ -1.42
TMEM39A-206ENST00000473684 DHX16O60231 1041 aaKnown RBP6.19□□□□□ -1.42
TMEM39A-206ENST00000473684 IGHA2P01877 340 aa6.19□□□□□ -1.42
TMEM39A-206ENST00000473684 P4HBP07237 508 aaKnown RBP6.19□□□□□ -1.42
TMEM39A-206ENST00000473684 SMPD1P17405 629 aa6.19□□□□□ -1.42
TMEM39A-206ENST00000473684 EAPPQ56P03 285 aaPredicted RBP6.19□□□□□ -1.42
TMEM39A-206ENST00000473684 MORC2Q9Y6X9 1032 aaPredicted RBP6.19□□□□□ -1.42
TMEM39A-206ENST00000473684 BRD4O60885 1362 aaPredicted RBP6.19□□□□□ -1.42
TMEM39A-206ENST00000473684 TTC36A6NLP5 189 aa6.19□□□□□ -1.42
TMEM39A-206ENST00000473684 GOLIM4O00461 696 aa6.19□□□□□ -1.42
TMEM39A-206ENST00000473684 DDIT3P35638 169 aa6.19□□□□□ -1.42
TMEM39A-206ENST00000473684 FMR1Q06787 632 aaKnown RBP eCLIP6.19□□□□□ -1.42
TMEM39A-206ENST00000473684 C11orf91Q3C1V1 193 aa6.19□□□□□ -1.42
TMEM39A-206ENST00000473684 CYP4X1Q8N118 509 aa6.19□□□□□ -1.42
TMEM39A-206ENST00000473684 ZBTB9Q96C00 473 aa6.19□□□□□ -1.42
TMEM39A-206ENST00000473684 RSPH14Q9UHP6 348 aa6.19□□□□□ -1.42
TMEM39A-206ENST00000473684 DDX41Q9UJV9 622 aaKnown RBP6.19□□□□□ -1.42
TMEM39A-206ENST00000473684 NPC1L1Q9UHC9 1359 aa6.19□□□□□ -1.42
TMEM39A-206ENST00000473684 PLEKHH2Q8IVE3 1493 aa6.19□□□□□ -1.42
TMEM39A-206ENST00000473684 DSC3Q14574 896 aa6.18□□□□□ -1.42
TMEM39A-206ENST00000473684 NBPF9Q3BBW0 867 aa6.18□□□□□ -1.42
TMEM39A-206ENST00000473684 MEIOBQ8N635 442 aa6.18□□□□□ -1.42
TMEM39A-206ENST00000473684 FAM129BQ96TA1 746 aa6.18□□□□□ -1.42
TMEM39A-206ENST00000473684 NIFKQ9BYG3 293 aaKnown RBP6.18□□□□□ -1.42
TMEM39A-206ENST00000473684 GRIP2Q9C0E4 1043 aa6.18□□□□□ -1.42
TMEM39A-206ENST00000473684 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.18□□□□□ -1.42
TMEM39A-206ENST00000473684 CTIFO43310 598 aaKnown RBP6.18□□□□□ -1.42
TMEM39A-206ENST00000473684 ATCAYQ86WG3 371 aa6.18□□□□□ -1.42
TMEM39A-206ENST00000473684 ETFBKMTQ8IXQ9 262 aa6.18□□□□□ -1.42
TMEM39A-206ENST00000473684 PIBF1Q8WXW3 757 aa6.18□□□□□ -1.42
TMEM39A-206ENST00000473684 PHACTR1Q9C0D0 580 aa6.18□□□□□ -1.42
TMEM39A-206ENST00000473684 BSDC1Q9NW68 430 aaPredicted RBP6.18□□□□□ -1.42
TMEM39A-206ENST00000473684 SH3BP1Q9Y3L3 701 aa6.18□□□□□ -1.42
TMEM39A-206ENST00000473684 ATP10AO60312 1499 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms