RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	CWF19L2	Q2TBE0	894 aa	Known RBP	12.49	□□□□□ -0.41
MCF2L-223	ENST00000473345	CCDC152	Q4G0S7	254 aa		12.49	□□□□□ -0.41
MCF2L-223	ENST00000473345	G2E3	Q7L622	706 aa		12.49	□□□□□ -0.41
MCF2L-223	ENST00000473345	USP17L1	Q7RTZ2	530 aa		12.49	□□□□□ -0.41
MCF2L-223	ENST00000473345	ZBED3	Q96IU2	234 aa	Predicted RBP	12.49	□□□□□ -0.41
MCF2L-223	ENST00000473345	AKAP11	Q9UKA4	1901 aa		12.49	□□□□□ -0.41
MCF2L-223	ENST00000473345	IRS2	Q9Y4H2	1338 aa		12.48	□□□□□ -0.41
MCF2L-223	ENST00000473345	GOLGA2	Q08379	1002 aa		12.48	□□□□□ -0.41
MCF2L-223	ENST00000473345	CWC25	Q9NXE8	425 aa	Predicted RBP	12.48	□□□□□ -0.41
MCF2L-223	ENST00000473345	MAP3K2	Q9Y2U5	619 aa		12.48	□□□□□ -0.41
MCF2L-223	ENST00000473345	MED23	Q9ULK4	1368 aa		12.47	□□□□□ -0.41
MCF2L-223	ENST00000473345	GPR25	O00155	361 aa		12.47	□□□□□ -0.41
MCF2L-223	ENST00000473345	ATP2B4	P23634	1241 aa		12.47	□□□□□ -0.41
MCF2L-223	ENST00000473345	TM4SF4	P48230	202 aa		12.47	□□□□□ -0.41
MCF2L-223	ENST00000473345	FKBP1B	P68106	108 aa		12.47	□□□□□ -0.41
MCF2L-223	ENST00000473345	PRKG1	Q13976	671 aa		12.47	□□□□□ -0.41
MCF2L-223	ENST00000473345	PODN	Q7Z5L7	613 aa		12.47	□□□□□ -0.41
MCF2L-223	ENST00000473345	ANKRD18A	Q8IVF6	992 aa		12.47	□□□□□ -0.41
MCF2L-223	ENST00000473345	IFT57	Q9NWB7	429 aa		12.47	□□□□□ -0.41
MCF2L-223	ENST00000473345		G3V3G9	751 aa		12.46	□□□□□ -0.41
MCF2L-223	ENST00000473345	CCT4	P50991	539 aa	Known RBP	12.46	□□□□□ -0.41
MCF2L-223	ENST00000473345	CASP7	P55210	303 aa		12.46	□□□□□ -0.41
MCF2L-223	ENST00000473345	DCAF8	Q5TAQ9	597 aa		12.46	□□□□□ -0.41
MCF2L-223	ENST00000473345	CERS5	Q8N5B7	392 aa		12.46	□□□□□ -0.41
MCF2L-223	ENST00000473345	BSDC1	Q9NW68	430 aa	Predicted RBP	12.46	□□□□□ -0.41
MCF2L-223	ENST00000473345	PI4KAP2	A4QPH2	592 aa		12.45	□□□□□ -0.42
MCF2L-223	ENST00000473345	ZEB1	P37275	1124 aa	Predicted RBP	12.45	□□□□□ -0.42
MCF2L-223	ENST00000473345	CCDC184	Q52MB2	194 aa		12.45	□□□□□ -0.42
MCF2L-223	ENST00000473345	LDLRAD1	Q5T700	205 aa		12.45	□□□□□ -0.42
MCF2L-223	ENST00000473345	PRPF38B	Q5VTL8	546 aa	Known RBP	12.45	□□□□□ -0.42
MCF2L-223	ENST00000473345	PI4KAP1	Q8N8J0	262 aa		12.45	□□□□□ -0.42
MCF2L-223	ENST00000473345	TSR2	Q969E8	191 aa	Known RBP	12.45	□□□□□ -0.42
MCF2L-223	ENST00000473345	PCDH10	Q9P2E7	1040 aa		12.45	□□□□□ -0.42
MCF2L-223	ENST00000473345	HTT	P42858	3142 aa		12.45	□□□□□ -0.42
MCF2L-223	ENST00000473345	PDE4DIP	Q5VU43	2346 aa		12.44	□□□□□ -0.42
MCF2L-223	ENST00000473345	NEURL1B	A8MQ27	555 aa		12.44	□□□□□ -0.42
MCF2L-223	ENST00000473345		H7C1W4	665 aa		12.44	□□□□□ -0.42
MCF2L-223	ENST00000473345	GJA5	P36382	358 aa		12.44	□□□□□ -0.42
MCF2L-223	ENST00000473345	WDR43	Q15061	677 aa	Known RBP eCLIP	12.44	□□□□□ -0.42
MCF2L-223	ENST00000473345	KIAA0825	Q8IV33	1275 aa		12.44	□□□□□ -0.42
MCF2L-223	ENST00000473345	FBXW7	Q969H0	707 aa		12.44	□□□□□ -0.42
MCF2L-223	ENST00000473345	CLMN	Q96JQ2	1002 aa		12.44	□□□□□ -0.42
MCF2L-223	ENST00000473345	POTEF	A5A3E0	1075 aa		12.43	□□□□□ -0.42
MCF2L-223	ENST00000473345	IGF2BP3	O00425	579 aa	Known RBP eCLIP	12.43	□□□□□ -0.42
MCF2L-223	ENST00000473345	STRIP1	Q5VSL9	837 aa		12.43	□□□□□ -0.42
MCF2L-223	ENST00000473345	SPRYD7	Q5W111	196 aa		12.43	□□□□□ -0.42
MCF2L-223	ENST00000473345	KSR2	Q6VAB6	950 aa		12.43	□□□□□ -0.42
MCF2L-223	ENST00000473345	UBE3B	Q7Z3V4	1068 aa		12.43	□□□□□ -0.42
MCF2L-223	ENST00000473345	GNAI1	P63096	354 aa		12.42	□□□□□ -0.42
MCF2L-223	ENST00000473345	GTF2I	P78347	998 aa		12.42	□□□□□ -0.42
MCF2L-223	ENST00000473345	TTLL12	Q14166	644 aa	Predicted RBP	12.42	□□□□□ -0.42
MCF2L-223	ENST00000473345	FBXO46	Q6PJ61	603 aa	Predicted RBP	12.42	□□□□□ -0.42
MCF2L-223	ENST00000473345	CDAN1	Q8IWY9	1227 aa		12.42	□□□□□ -0.42
MCF2L-223	ENST00000473345	REM2	Q8IYK8	340 aa	Predicted RBP	12.42	□□□□□ -0.42
MCF2L-223	ENST00000473345	CDC5L	Q99459	802 aa	Known RBP	12.42	□□□□□ -0.42
MCF2L-223	ENST00000473345	CFHR5	Q9BXR6	569 aa		12.42	□□□□□ -0.42
MCF2L-223	ENST00000473345	COA1	Q9GZY4	146 aa		12.42	□□□□□ -0.42
MCF2L-223	ENST00000473345	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.42	□□□□□ -0.42
MCF2L-223	ENST00000473345	HDAC9	Q9UKV0	1011 aa		12.42	□□□□□ -0.42
MCF2L-223	ENST00000473345	ZNF804B	A4D1E1	1349 aa		12.41	□□□□□ -0.42
MCF2L-223	ENST00000473345	ITGA6	P23229	1130 aa		12.41	□□□□□ -0.42
MCF2L-223	ENST00000473345	NOM1	Q5C9Z4	860 aa	Known RBP	12.41	□□□□□ -0.42
MCF2L-223	ENST00000473345	TTLL5	Q6EMB2	1281 aa		12.41	□□□□□ -0.42
MCF2L-223	ENST00000473345	HELB	Q8NG08	1087 aa	Predicted RBP	12.41	□□□□□ -0.42
MCF2L-223	ENST00000473345	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.41	□□□□□ -0.42
MCF2L-223	ENST00000473345	ANGEL1	Q9UNK9	670 aa	Known RBP	12.41	□□□□□ -0.42
MCF2L-223	ENST00000473345	JAG2	Q9Y219	1238 aa		12.41	□□□□□ -0.42
MCF2L-223	ENST00000473345	FKTN	O75072	461 aa		12.4	□□□□□ -0.42
MCF2L-223	ENST00000473345	TAF5L	O75529	589 aa		12.4	□□□□□ -0.42
MCF2L-223	ENST00000473345	CSF1R	P07333	972 aa		12.4	□□□□□ -0.42
MCF2L-223	ENST00000473345	CHRND	Q07001	517 aa		12.4	□□□□□ -0.42
MCF2L-223	ENST00000473345	PKN2	Q16513	984 aa	Known RBP	12.4	□□□□□ -0.42
MCF2L-223	ENST00000473345	CCDC30	Q5VVM6	783 aa		12.4	□□□□□ -0.42
MCF2L-223	ENST00000473345	PTPN18	Q99952	460 aa		12.4	□□□□□ -0.42
MCF2L-223	ENST00000473345	PLA2G12B	Q9BX93	195 aa		12.4	□□□□□ -0.42
MCF2L-223	ENST00000473345	CD209	Q9NNX6	404 aa		12.4	□□□□□ -0.42
MCF2L-223	ENST00000473345	LEMD3	Q9Y2U8	911 aa		12.4	□□□□□ -0.42
MCF2L-223	ENST00000473345	MYH3	P11055	1940 aa		12.39	□□□□□ -0.43
MCF2L-223	ENST00000473345		A0A1B0GUL6	1792 aa		12.39	□□□□□ -0.43
MCF2L-223	ENST00000473345	CLRN2	A0PK11	232 aa		12.39	□□□□□ -0.43
MCF2L-223	ENST00000473345	GCKR	Q14397	625 aa		12.39	□□□□□ -0.43
MCF2L-223	ENST00000473345	MAP3K11	Q16584	847 aa		12.39	□□□□□ -0.43
MCF2L-223	ENST00000473345	EPHA10	Q5JZY3	1008 aa		12.39	□□□□□ -0.43
MCF2L-223	ENST00000473345	OTOP1	Q7RTM1	612 aa		12.39	□□□□□ -0.43
MCF2L-223	ENST00000473345	IFNL1	Q8IU54	200 aa		12.39	□□□□□ -0.43
MCF2L-223	ENST00000473345	WNK4	Q96J92	1243 aa		12.39	□□□□□ -0.43
MCF2L-223	ENST00000473345	PRMT6	Q96LA8	375 aa	Predicted RBP	12.39	□□□□□ -0.43
MCF2L-223	ENST00000473345	DEFB129	Q9H1M3	183 aa		12.39	□□□□□ -0.43
MCF2L-223	ENST00000473345	MKI67	P46013	3256 aa	Known RBP	12.38	□□□□□ -0.43
MCF2L-223	ENST00000473345		F8W031	263 aa	Predicted RBP	12.38	□□□□□ -0.43
MCF2L-223	ENST00000473345	DDX58	O95786	925 aa	Known RBP	12.38	□□□□□ -0.43
MCF2L-223	ENST00000473345	FOXO4	P98177	505 aa		12.38	□□□□□ -0.43
MCF2L-223	ENST00000473345	NBPF12	Q5TAG4	269 aa	Predicted RBP	12.38	□□□□□ -0.43
MCF2L-223	ENST00000473345	OGFOD1	Q8N543	542 aa		12.38	□□□□□ -0.43
MCF2L-223	ENST00000473345	CNKSR2	Q8WXI2	1034 aa		12.38	□□□□□ -0.43
MCF2L-223	ENST00000473345	MYO3B	Q8WXR4	1341 aa		12.37	□□□□□ -0.43
MCF2L-223	ENST00000473345	HSP90B1	P14625	803 aa	Known RBP	12.37	□□□□□ -0.43
MCF2L-223	ENST00000473345	GRIK5	Q16478	980 aa		12.37	□□□□□ -0.43
MCF2L-223	ENST00000473345	APOBEC3F	Q8IUX4	373 aa	Known RBP	12.37	□□□□□ -0.43
MCF2L-223	ENST00000473345	LAMB1	P07942	1786 aa		12.37	□□□□□ -0.43

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