RNA–Protein interactions for RNA: ENST00000472255.1

TUBBP11-201, Transcript of tubulin beta class I pseudogene 11, humanhuman

BASIC

Gene TUBBP11, Length 252 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP11-201ENST00000472255 PODXL2Q9NZ53 605 aa9.35□□□□□ -0.91
TUBBP11-201ENST00000472255 CHMP3Q9Y3E7 222 aa9.35□□□□□ -0.91
TUBBP11-201ENST00000472255 USP17L3A6NCW0 530 aa9.34□□□□□ -0.91
TUBBP11-201ENST00000472255 USP17L4A6NCW7 530 aa9.34□□□□□ -0.91
TUBBP11-201ENST00000472255 DDX58O95786 925 aaKnown RBP9.34□□□□□ -0.91
TUBBP11-201ENST00000472255 ATP2B4P23634 1241 aa9.34□□□□□ -0.91
TUBBP11-201ENST00000472255 EXOSC9Q06265 439 aaKnown RBP9.34□□□□□ -0.91
TUBBP11-201ENST00000472255 EPHA10Q5JZY3 1008 aa9.34□□□□□ -0.91
TUBBP11-201ENST00000472255 USP17L1Q7RTZ2 530 aa9.34□□□□□ -0.91
TUBBP11-201ENST00000472255 RASAL3Q86YV0 1011 aa9.34□□□□□ -0.91
TUBBP11-201ENST00000472255 KIAA0825Q8IV33 1275 aa9.34□□□□□ -0.91
TUBBP11-201ENST00000472255 WWC1Q8IX03 1113 aa9.34□□□□□ -0.91
TUBBP11-201ENST00000472255 GMLQ99445 158 aa9.34□□□□□ -0.91
TUBBP11-201ENST00000472255 LRRC37AA6NMS7 1700 aa9.34□□□□□ -0.92
TUBBP11-201ENST00000472255 POLR2AP24928 1970 aaKnown RBP9.33□□□□□ -0.92
TUBBP11-201ENST00000472255 XDHP47989 1333 aa9.33□□□□□ -0.92
TUBBP11-201ENST00000472255 H7C1W4 665 aa9.33□□□□□ -0.92
TUBBP11-201ENST00000472255 ITGA6P23229 1130 aa9.33□□□□□ -0.92
TUBBP11-201ENST00000472255 RPS12P25398 132 aaKnown RBP9.33□□□□□ -0.92
TUBBP11-201ENST00000472255 CCT4P50991 539 aaKnown RBP9.33□□□□□ -0.92
TUBBP11-201ENST00000472255 GTF2IP78347 998 aa9.33□□□□□ -0.92
TUBBP11-201ENST00000472255 NOGQ13253 232 aa9.33□□□□□ -0.92
TUBBP11-201ENST00000472255 DACT2Q5SW24 774 aa9.33□□□□□ -0.92
TUBBP11-201ENST00000472255 STK31Q9BXU1 1019 aa9.33□□□□□ -0.92
TUBBP11-201ENST00000472255 CDHR2Q9BYE9 1310 aa9.32□□□□□ -0.92
TUBBP11-201ENST00000472255 THSD7BQ9C0I4 1608 aa9.32□□□□□ -0.92
TUBBP11-201ENST00000472255 CLRN2A0PK11 232 aa9.32□□□□□ -0.92
TUBBP11-201ENST00000472255 SLC10A3P09131 477 aa9.32□□□□□ -0.92
TUBBP11-201ENST00000472255 MLLT1Q03111 559 aaPredicted RBP9.32□□□□□ -0.92
TUBBP11-201ENST00000472255 FKBP5Q13451 457 aaPredicted RBP9.32□□□□□ -0.92
TUBBP11-201ENST00000472255 GCKRQ14397 625 aa9.32□□□□□ -0.92
TUBBP11-201ENST00000472255 CDC5LQ99459 802 aaKnown RBP9.32□□□□□ -0.92
TUBBP11-201ENST00000472255 MRS2Q9HD23 443 aa9.32□□□□□ -0.92
TUBBP11-201ENST00000472255 BSDC1Q9NW68 430 aaPredicted RBP9.32□□□□□ -0.92
TUBBP11-201ENST00000472255 FANCIQ9NVI1 1328 aa9.31□□□□□ -0.92
TUBBP11-201ENST00000472255 SPEF2Q9C093 1822 aa9.31□□□□□ -0.92
TUBBP11-201ENST00000472255 IGHMBP2P38935 993 aaKnown RBP9.31□□□□□ -0.92
TUBBP11-201ENST00000472255 KCNJ4P48050 445 aa9.31□□□□□ -0.92
TUBBP11-201ENST00000472255 CASP7P55210 303 aa9.31□□□□□ -0.92
TUBBP11-201ENST00000472255 PTPN12Q05209 780 aaKnown RBP9.31□□□□□ -0.92
TUBBP11-201ENST00000472255 CALD1Q05682 793 aaKnown RBP9.31□□□□□ -0.92
TUBBP11-201ENST00000472255 CHRNDQ07001 517 aa9.31□□□□□ -0.92
TUBBP11-201ENST00000472255 NEXNQ0ZGT2 675 aa9.31□□□□□ -0.92
TUBBP11-201ENST00000472255 FLIIQ13045 1269 aa9.31□□□□□ -0.92
TUBBP11-201ENST00000472255 TTLL5Q6EMB2 1281 aa9.31□□□□□ -0.92
TUBBP11-201ENST00000472255 CERS5Q8N5B7 392 aa9.31□□□□□ -0.92
TUBBP11-201ENST00000472255 AGBL3Q8NEM8 1001 aa9.31□□□□□ -0.92
TUBBP11-201ENST00000472255 CCDC102AQ96A19 550 aa9.31□□□□□ -0.92
TUBBP11-201ENST00000472255 HHIPL1Q96JK4 782 aa9.31□□□□□ -0.92
TUBBP11-201ENST00000472255 ZNF804BA4D1E1 1349 aa9.31□□□□□ -0.92
TUBBP11-201ENST00000472255 WNT10BO00744 389 aa9.3□□□□□ -0.92
TUBBP11-201ENST00000472255 VAMP4O75379 141 aa9.3□□□□□ -0.92
TUBBP11-201ENST00000472255 ECM2O94769 699 aaPredicted RBP9.3□□□□□ -0.92
TUBBP11-201ENST00000472255 FOXO4P98177 505 aa9.3□□□□□ -0.92
TUBBP11-201ENST00000472255 SLC4A10Q6U841 1118 aa9.3□□□□□ -0.92
TUBBP11-201ENST00000472255 CDAN1Q8IWY9 1227 aa9.3□□□□□ -0.92
TUBBP11-201ENST00000472255 FAM9BQ8IZU0 186 aa9.3□□□□□ -0.92
TUBBP11-201ENST00000472255 DNAAF4Q8WXU2 420 aa9.3□□□□□ -0.92
TUBBP11-201ENST00000472255 CLMNQ96JQ2 1002 aa9.3□□□□□ -0.92
TUBBP11-201ENST00000472255 MPHOSPH8Q99549 860 aa9.3□□□□□ -0.92
TUBBP11-201ENST00000472255 IQSEC3Q9UPP2 1182 aaPredicted RBP9.3□□□□□ -0.92
TUBBP11-201ENST00000472255 GRIK5Q16478 980 aa9.29□□□□□ -0.92
TUBBP11-201ENST00000472255 LMBR1LQ6UX01 489 aa9.29□□□□□ -0.92
TUBBP11-201ENST00000472255 PODNQ7Z5L7 613 aa9.29□□□□□ -0.92
TUBBP11-201ENST00000472255 PUS3Q9BZE2 481 aaKnown RBP9.29□□□□□ -0.92
TUBBP11-201ENST00000472255 ANGEL1Q9UNK9 670 aaKnown RBP9.29□□□□□ -0.92
TUBBP11-201ENST00000472255 ANKRD18BA2A2Z9 1011 aa9.28□□□□□ -0.92
TUBBP11-201ENST00000472255 CA12O43570 354 aa9.28□□□□□ -0.92
TUBBP11-201ENST00000472255 RBM5P52756 815 aaKnown RBP eCLIP9.28□□□□□ -0.92
TUBBP11-201ENST00000472255 ZNF296Q8WUU4 475 aaPredicted RBP9.28□□□□□ -0.92
TUBBP11-201ENST00000472255 PRMT6Q96LA8 375 aaPredicted RBP9.28□□□□□ -0.92
TUBBP11-201ENST00000472255 COA1Q9GZY4 146 aa9.28□□□□□ -0.92
TUBBP11-201ENST00000472255 VEZTQ9HBM0 779 aa9.28□□□□□ -0.92
TUBBP11-201ENST00000472255 CD209Q9NNX6 404 aa9.28□□□□□ -0.92
TUBBP11-201ENST00000472255 MED23Q9ULK4 1368 aa9.27□□□□□ -0.93
TUBBP11-201ENST00000472255 CSF1RP07333 972 aa9.27□□□□□ -0.93
TUBBP11-201ENST00000472255 GYG1P46976 350 aa9.27□□□□□ -0.93
TUBBP11-201ENST00000472255 CFAP100Q494V2 611 aa9.27□□□□□ -0.93
TUBBP11-201ENST00000472255 BEND3Q5T5X7 828 aa9.27□□□□□ -0.93
TUBBP11-201ENST00000472255 NBPF12Q5TAG4 269 aaPredicted RBP9.27□□□□□ -0.93
TUBBP11-201ENST00000472255 STRIP1Q5VSL9 837 aa9.27□□□□□ -0.93
TUBBP11-201ENST00000472255 OGFOD1Q8N543 542 aa9.27□□□□□ -0.93
TUBBP11-201ENST00000472255 KLHDC4Q8TBB5 520 aa9.27□□□□□ -0.93
TUBBP11-201ENST00000472255 CNKSR2Q8WXI2 1034 aa9.27□□□□□ -0.93
TUBBP11-201ENST00000472255 SUCLG2Q96I99 432 aa9.27□□□□□ -0.93
TUBBP11-201ENST00000472255 HPS5Q9UPZ3 1129 aa9.27□□□□□ -0.93
TUBBP11-201ENST00000472255 LEMD3Q9Y2U8 911 aa9.27□□□□□ -0.93
TUBBP11-201ENST00000472255 HSP90B1P14625 803 aaKnown RBP9.26□□□□□ -0.93
TUBBP11-201ENST00000472255 GJA5P36382 358 aa9.26□□□□□ -0.93
TUBBP11-201ENST00000472255 RGS19P49795 217 aa9.26□□□□□ -0.93
TUBBP11-201ENST00000472255 CACNB3P54284 484 aa9.26□□□□□ -0.93
TUBBP11-201ENST00000472255 CAP1Q01518 475 aa9.26□□□□□ -0.93
TUBBP11-201ENST00000472255 CHAF1AQ13111 956 aaPredicted RBP9.26□□□□□ -0.93
TUBBP11-201ENST00000472255 IFIT5Q13325 482 aaKnown RBP9.26□□□□□ -0.93
TUBBP11-201ENST00000472255 DLGAP5Q15398 846 aa9.26□□□□□ -0.93
TUBBP11-201ENST00000472255 TAF7LQ5H9L4 462 aa9.26□□□□□ -0.93
TUBBP11-201ENST00000472255 CTU1Q7Z7A3 348 aaKnown RBP9.26□□□□□ -0.93
TUBBP11-201ENST00000472255 LINS1Q8NG48 757 aa9.26□□□□□ -0.93
TUBBP11-201ENST00000472255 DEFB129Q9H1M3 183 aa9.26□□□□□ -0.93
TUBBP11-201ENST00000472255 CNNM1Q9NRU3 951 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms