RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 ITGB2P05107 769 aa5.64□□□□□ -1.51
LRCH3-213ENST00000471667 SNRPNP63162 240 aaKnown RBP5.64□□□□□ -1.51
LRCH3-213ENST00000471667 TLR1Q15399 786 aa5.64□□□□□ -1.51
LRCH3-213ENST00000471667 DDB1Q16531 1140 aa5.64□□□□□ -1.51
LRCH3-213ENST00000471667 SLFNL1Q499Z3 407 aa5.64□□□□□ -1.51
LRCH3-213ENST00000471667 SPOCK3Q9BQ16 436 aa5.64□□□□□ -1.51
LRCH3-213ENST00000471667 ETNK1Q9HBU6 452 aa5.64□□□□□ -1.51
LRCH3-213ENST00000471667 NMRK2Q9NPI5 230 aa5.64□□□□□ -1.51
LRCH3-213ENST00000471667 ROBO2Q9HCK4 1378 aa5.64□□□□□ -1.51
LRCH3-213ENST00000471667 IRF5Q13568 498 aa5.63□□□□□ -1.51
LRCH3-213ENST00000471667 OXLD1Q5BKU9 147 aa5.63□□□□□ -1.51
LRCH3-213ENST00000471667 EFHC2Q5JST6 749 aa5.63□□□□□ -1.51
LRCH3-213ENST00000471667 C1orf229Q6ZS94 237 aaPredicted RBP5.63□□□□□ -1.51
LRCH3-213ENST00000471667 PPARGC1BQ86YN6 1023 aaKnown RBP5.63□□□□□ -1.51
LRCH3-213ENST00000471667 RNF135Q8IUD6 432 aa5.63□□□□□ -1.51
LRCH3-213ENST00000471667 GALNT6Q8NCL4 622 aa5.63□□□□□ -1.51
LRCH3-213ENST00000471667 RHBDD1Q8TEB9 315 aa5.63□□□□□ -1.51
LRCH3-213ENST00000471667 ABHD17AQ96GS6 310 aa5.63□□□□□ -1.51
LRCH3-213ENST00000471667 PRM3Q9NNZ6 103 aa5.63□□□□□ -1.51
LRCH3-213ENST00000471667 TFCP2L1Q9NZI6 479 aa5.63□□□□□ -1.51
LRCH3-213ENST00000471667 GDF2Q9UK05 429 aaPredicted RBP5.63□□□□□ -1.51
LRCH3-213ENST00000471667 ATXN7L1Q9ULK2 861 aaPredicted RBP5.63□□□□□ -1.51
LRCH3-213ENST00000471667 BRD4O60885 1362 aaPredicted RBP5.63□□□□□ -1.51
LRCH3-213ENST00000471667 PLEKHG2Q9H7P9 1386 aa5.63□□□□□ -1.51
LRCH3-213ENST00000471667 MYOM3Q5VTT5 1437 aa5.63□□□□□ -1.51
LRCH3-213ENST00000471667 TOPAZ1Q8N9V7 1692 aa5.63□□□□□ -1.51
LRCH3-213ENST00000471667 ARHGEF28Q8N1W1 1705 aaKnown RBP5.62□□□□□ -1.51
LRCH3-213ENST00000471667 LBX1P52954 281 aa5.62□□□□□ -1.51
LRCH3-213ENST00000471667 GOLGA6L1Q8N7Z2 621 aa5.62□□□□□ -1.51
LRCH3-213ENST00000471667 CHIC2Q9UKJ5 165 aa5.62□□□□□ -1.51
LRCH3-213ENST00000471667 GPRASP1Q5JY77 1395 aa5.62□□□□□ -1.51
LRCH3-213ENST00000471667 ANKRD30BQ9BXX2 1392 aa5.62□□□□□ -1.51
LRCH3-213ENST00000471667 MYO5BQ9ULV0 1848 aa5.62□□□□□ -1.51
LRCH3-213ENST00000471667 C2CD2LO14523 706 aa5.61□□□□□ -1.51
LRCH3-213ENST00000471667 BNIP3LO60238 219 aa5.61□□□□□ -1.51
LRCH3-213ENST00000471667 PROCP04070 461 aa5.61□□□□□ -1.51
LRCH3-213ENST00000471667 BMP4P12644 408 aa5.61□□□□□ -1.51
LRCH3-213ENST00000471667 FGFR3P22607 806 aa5.61□□□□□ -1.51
LRCH3-213ENST00000471667 HMGB2P26583 209 aaKnown RBP5.61□□□□□ -1.51
LRCH3-213ENST00000471667 VAC14Q08AM6 782 aa5.61□□□□□ -1.51
LRCH3-213ENST00000471667 NAIPQ13075 1403 aa5.61□□□□□ -1.51
LRCH3-213ENST00000471667 EDARADDQ8WWZ3 215 aa5.61□□□□□ -1.51
LRCH3-213ENST00000471667 SIRT1Q96EB6 747 aa5.61□□□□□ -1.51
LRCH3-213ENST00000471667 ANKRD30AQ9BXX3 1397 aa5.61□□□□□ -1.51
LRCH3-213ENST00000471667 CRISPLD1Q9H336 500 aa5.61□□□□□ -1.51
LRCH3-213ENST00000471667 RRAGCQ9HB90 399 aa5.61□□□□□ -1.51
LRCH3-213ENST00000471667 NDFIP2Q9NV92 336 aa5.61□□□□□ -1.51
LRCH3-213ENST00000471667 MKL2Q9ULH7 1088 aa5.61□□□□□ -1.51
LRCH3-213ENST00000471667 SSH2Q76I76 1423 aa5.6□□□□□ -1.51
LRCH3-213ENST00000471667 ADAM23O75077 832 aa5.6□□□□□ -1.51
LRCH3-213ENST00000471667 PLA2G4AP47712 749 aa5.6□□□□□ -1.51
LRCH3-213ENST00000471667 SCNN1DP51172 638 aa5.6□□□□□ -1.51
LRCH3-213ENST00000471667 GDF10P55107 478 aa5.6□□□□□ -1.51
LRCH3-213ENST00000471667 CTBSQ01459 385 aa5.6□□□□□ -1.51
LRCH3-213ENST00000471667 SLCO4C1Q6ZQN7 724 aa5.6□□□□□ -1.51
LRCH3-213ENST00000471667 TBC1D9Q6ZT07 1266 aa5.6□□□□□ -1.51
LRCH3-213ENST00000471667 MKRN1Q9UHC7 482 aaKnown RBP5.6□□□□□ -1.51
LRCH3-213ENST00000471667 IQGAP3Q86VI3 1631 aa5.59□□□□□ -1.51
LRCH3-213ENST00000471667 NRXN3Q9Y4C0 1643 aa5.59□□□□□ -1.51
LRCH3-213ENST00000471667 C10orf71Q711Q0 1435 aa5.59□□□□□ -1.51
LRCH3-213ENST00000471667 KIAA0232Q92628 1395 aa5.59□□□□□ -1.51
LRCH3-213ENST00000471667 IGSF1Q8N6C5 1336 aa5.59□□□□□ -1.51
LRCH3-213ENST00000471667 KRBA1A5PL33 1030 aa5.59□□□□□ -1.51
LRCH3-213ENST00000471667 INHAP05111 366 aa5.59□□□□□ -1.51
LRCH3-213ENST00000471667 AMPD1P23109 780 aa5.59□□□□□ -1.51
LRCH3-213ENST00000471667 COL8A1P27658 744 aa5.59□□□□□ -1.51
LRCH3-213ENST00000471667 ABL2P42684 1182 aa5.59□□□□□ -1.51
LRCH3-213ENST00000471667 CHRNA2Q15822 529 aa5.59□□□□□ -1.51
LRCH3-213ENST00000471667 HIRIP3Q9BW71 556 aaPredicted RBP5.59□□□□□ -1.51
LRCH3-213ENST00000471667 GDPD2Q9HCC8 539 aa5.59□□□□□ -1.51
LRCH3-213ENST00000471667 GGA1Q9UJY5 639 aa5.59□□□□□ -1.51
LRCH3-213ENST00000471667 ABCA3Q99758 1704 aa5.59□□□□□ -1.51
LRCH3-213ENST00000471667 ATP7BP35670 1465 aa5.58□□□□□ -1.52
LRCH3-213ENST00000471667 GOLGB1Q14789 3259 aaKnown RBP5.58□□□□□ -1.52
LRCH3-213ENST00000471667 ATP4AP20648 1035 aa5.58□□□□□ -1.52
LRCH3-213ENST00000471667 MAP2K1Q02750 393 aaPredicted RBP5.58□□□□□ -1.52
LRCH3-213ENST00000471667 MAP7D1Q3KQU3 841 aa5.58□□□□□ -1.52
LRCH3-213ENST00000471667 FIGNL1Q6PIW4 674 aa5.58□□□□□ -1.52
LRCH3-213ENST00000471667 LARP1Q6PKG0 1096 aaKnown RBP5.58□□□□□ -1.52
LRCH3-213ENST00000471667 ALYREFQ86V81 257 aaKnown RBP5.58□□□□□ -1.52
LRCH3-213ENST00000471667 C1orf216Q8TAB5 229 aa5.58□□□□□ -1.52
LRCH3-213ENST00000471667 NIFKQ9BYG3 293 aaKnown RBP5.58□□□□□ -1.52
LRCH3-213ENST00000471667 ZCCHC2Q9C0B9 1178 aaKnown RBP5.58□□□□□ -1.52
LRCH3-213ENST00000471667 PCDHGC4Q9Y5F7 938 aa5.58□□□□□ -1.52
LRCH3-213ENST00000471667 NRXN1Q9ULB1 1477 aa5.58□□□□□ -1.52
LRCH3-213ENST00000471667 BCL9O00512 1426 aa5.57□□□□□ -1.52
LRCH3-213ENST00000471667 PITPNM2Q9BZ72 1349 aa5.57□□□□□ -1.52
LRCH3-213ENST00000471667 EPXP11678 715 aa5.57□□□□□ -1.52
LRCH3-213ENST00000471667 HOXB4P17483 251 aaPredicted RBP5.57□□□□□ -1.52
LRCH3-213ENST00000471667 SMTNP53814 917 aa5.57□□□□□ -1.52
LRCH3-213ENST00000471667 ZNF827Q17R98 1081 aa5.57□□□□□ -1.52
LRCH3-213ENST00000471667 LINC00114Q6XXX2 140 aa5.57□□□□□ -1.52
LRCH3-213ENST00000471667 ARHGAP27Q6ZUM4 889 aa5.57□□□□□ -1.52
LRCH3-213ENST00000471667 PLPP7Q8NBV4 271 aa5.57□□□□□ -1.52
LRCH3-213ENST00000471667 SLC17A8Q8NDX2 589 aa5.57□□□□□ -1.52
LRCH3-213ENST00000471667 DNAAF2Q9NVR5 837 aaKnown RBP5.57□□□□□ -1.52
LRCH3-213ENST00000471667 PNPLA7Q6ZV29 1317 aa5.56□□□□□ -1.52
LRCH3-213ENST00000471667 NEURL1BA8MQ27 555 aa5.56□□□□□ -1.52
LRCH3-213ENST00000471667 ARAFP10398 606 aa5.56□□□□□ -1.52
LRCH3-213ENST00000471667 ZC3H6P61129 1189 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms