RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 CCDC191Q8NCU4 936 aa16.01■□□□□ 0.15
NPHP4-207ENST00000470763 CCDC150Q8NCX0 1101 aa16.01■□□□□ 0.15
NPHP4-207ENST00000470763 IL17REQ8NFR9 667 aa16.01■□□□□ 0.15
NPHP4-207ENST00000470763 ZSCAN16Q9H4T2 348 aaPredicted RBP16.01■□□□□ 0.15
NPHP4-207ENST00000470763 TLR7Q9NYK1 1049 aaKnown RBP16.01■□□□□ 0.15
NPHP4-207ENST00000470763 ZSCAN26Q16670 478 aa16.01■□□□□ 0.15
NPHP4-207ENST00000470763 BEND3Q5T5X7 828 aa16.01■□□□□ 0.15
NPHP4-207ENST00000470763 Q6ZUG5 572 aa16.01■□□□□ 0.15
NPHP4-207ENST00000470763 NAT10Q9H0A0 1025 aaKnown RBP16.01■□□□□ 0.15
NPHP4-207ENST00000470763 IMPACTQ9P2X3 320 aa16.01■□□□□ 0.15
NPHP4-207ENST00000470763 PTPN21Q16825 1174 aa16.01■□□□□ 0.15
NPHP4-207ENST00000470763 POTEAQ6S8J7 498 aa16.01■□□□□ 0.15
NPHP4-207ENST00000470763 ENGASEQ8NFI3 743 aa16.01■□□□□ 0.15
NPHP4-207ENST00000470763 DNAAF4Q8WXU2 420 aa16.01■□□□□ 0.15
NPHP4-207ENST00000470763 EDC3Q96F86 508 aaKnown RBP16.01■□□□□ 0.15
NPHP4-207ENST00000470763 CHPF2Q9P2E5 772 aa16.01■□□□□ 0.15
NPHP4-207ENST00000470763 AKAP12Q02952 1782 aa16.01■□□□□ 0.15
NPHP4-207ENST00000470763 ACEP12821 1306 aa16.01■□□□□ 0.15
NPHP4-207ENST00000470763 N4BP2Q86UW6 1770 aaPredicted RBP16■□□□□ 0.15
NPHP4-207ENST00000470763 A0A1B0GVL5 298 aa16■□□□□ 0.15
NPHP4-207ENST00000470763 TADA3O75528 432 aa16■□□□□ 0.15
NPHP4-207ENST00000470763 TBC1D8O95759 1140 aa16■□□□□ 0.15
NPHP4-207ENST00000470763 PAXIP1Q6ZW49 1069 aaPredicted RBP16■□□□□ 0.15
NPHP4-207ENST00000470763 LRRC59Q96AG4 307 aaKnown RBP16■□□□□ 0.15
NPHP4-207ENST00000470763 RASSF4Q9H2L5 321 aa16■□□□□ 0.15
NPHP4-207ENST00000470763 RCOR1Q9UKL0 485 aa16■□□□□ 0.15
NPHP4-207ENST00000470763 EVCP57679 992 aa16■□□□□ 0.15
NPHP4-207ENST00000470763 GOLGA8FQ08AF8 430 aa16■□□□□ 0.15
NPHP4-207ENST00000470763 GOLGA8DPQ0D2H9 430 aa16■□□□□ 0.15
NPHP4-207ENST00000470763 GNL2Q13823 731 aaKnown RBP16■□□□□ 0.15
NPHP4-207ENST00000470763 SOS2Q07890 1332 aaPredicted RBP16■□□□□ 0.15
NPHP4-207ENST00000470763 SCRN1Q12765 414 aa15.99■□□□□ 0.15
NPHP4-207ENST00000470763 ESCO1Q5FWF5 840 aa15.99■□□□□ 0.15
NPHP4-207ENST00000470763 OVOS2A0A0J9YW53 1432 aa15.99■□□□□ 0.15
NPHP4-207ENST00000470763 OVOS2Q6IE36 1432 aa15.99■□□□□ 0.15
NPHP4-207ENST00000470763 FMN2Q9NZ56 1722 aa15.99■□□□□ 0.15
NPHP4-207ENST00000470763 MYO1CO00159 1063 aa15.99■□□□□ 0.15
NPHP4-207ENST00000470763 SMC1AQ14683 1233 aaKnown RBP15.99■□□□□ 0.15
NPHP4-207ENST00000470763 ZRSR1Q15695 479 aaKnown RBP15.99■□□□□ 0.15
NPHP4-207ENST00000470763 EAF2Q96CJ1 260 aaPredicted RBP15.99■□□□□ 0.15
NPHP4-207ENST00000470763 SEC62Q99442 399 aaKnown RBP15.99■□□□□ 0.15
NPHP4-207ENST00000470763 NRDCO43847 1150 aa15.99■□□□□ 0.15
NPHP4-207ENST00000470763 MUM1L1Q5H9M0 696 aa15.99■□□□□ 0.15
NPHP4-207ENST00000470763 ISM2Q6H9L7 571 aa15.99■□□□□ 0.15
NPHP4-207ENST00000470763 CHGBP05060 677 aa15.98■□□□□ 0.15
NPHP4-207ENST00000470763 LMOD1P29536 600 aaPredicted RBP15.98■□□□□ 0.15
NPHP4-207ENST00000470763 AMPHP49418 695 aa15.98■□□□□ 0.15
NPHP4-207ENST00000470763 GPS2Q13227 327 aa15.98■□□□□ 0.15
NPHP4-207ENST00000470763 TRIM65Q6PJ69 517 aa15.98■□□□□ 0.15
NPHP4-207ENST00000470763 NEK1Q96PY6 1258 aa15.98■□□□□ 0.15
NPHP4-207ENST00000470763 HIP1O00291 1037 aa15.97■□□□□ 0.15
NPHP4-207ENST00000470763 LMAN1P49257 510 aa15.97■□□□□ 0.15
NPHP4-207ENST00000470763 CC2D1AQ6P1N0 951 aaPredicted RBP15.97■□□□□ 0.15
NPHP4-207ENST00000470763 PHLPP2Q6ZVD8 1323 aa15.97■□□□□ 0.15
NPHP4-207ENST00000470763 NUTM2GQ5VZR2 741 aa15.97■□□□□ 0.15
NPHP4-207ENST00000470763 UTP14AQ9BVJ6 771 aaKnown RBP15.97■□□□□ 0.15
NPHP4-207ENST00000470763 C9orf78Q9NZ63 289 aaPredicted RBP15.97■□□□□ 0.15
NPHP4-207ENST00000470763 NDUFB9Q9Y6M9 179 aa15.97■□□□□ 0.15
NPHP4-207ENST00000470763 NUTM2BA6NNL0 878 aaPredicted RBP15.97■□□□□ 0.15
NPHP4-207ENST00000470763 NUTM2EB1AL46 878 aaPredicted RBP15.97■□□□□ 0.15
NPHP4-207ENST00000470763 ATP1A3P13637 1013 aa15.97■□□□□ 0.15
NPHP4-207ENST00000470763 CCT2P78371 535 aaKnown RBP15.97■□□□□ 0.15
NPHP4-207ENST00000470763 IRX3P78415 501 aaPredicted RBP15.97■□□□□ 0.15
NPHP4-207ENST00000470763 TAF7LQ5H9L4 462 aa15.97■□□□□ 0.15
NPHP4-207ENST00000470763 NUTM2AQ8IVF1 878 aaPredicted RBP15.97■□□□□ 0.15
NPHP4-207ENST00000470763 ALDH8A1Q9H2A2 487 aaPredicted RBP15.97■□□□□ 0.15
NPHP4-207ENST00000470763 PARP3Q9Y6F1 533 aa15.97■□□□□ 0.15
NPHP4-207ENST00000470763 EFCAB8A8MWE9 144 aa15.96■□□□□ 0.15
NPHP4-207ENST00000470763 CCDC129Q6ZRS4 1044 aa15.96■□□□□ 0.15
NPHP4-207ENST00000470763 UBXN6Q9BZV1 441 aa15.96■□□□□ 0.15
NPHP4-207ENST00000470763 MED23Q9ULK4 1368 aa15.96■□□□□ 0.15
NPHP4-207ENST00000470763 SASH1O94885 1247 aa15.96■□□□□ 0.15
NPHP4-207ENST00000470763 NDUFA8P51970 172 aa15.96■□□□□ 0.15
NPHP4-207ENST00000470763 REXO1L1PQ8IX06 675 aa15.96■□□□□ 0.15
NPHP4-207ENST00000470763 LTV1Q96GA3 475 aaPredicted RBP15.96■□□□□ 0.15
NPHP4-207ENST00000470763 PCDHA7Q9UN72 937 aa15.96■□□□□ 0.15
NPHP4-207ENST00000470763 RGPD8O14715 1765 aaPredicted RBP15.96■□□□□ 0.15
NPHP4-207ENST00000470763 PXDNQ92626 1479 aa15.96■□□□□ 0.15
NPHP4-207ENST00000470763 KDRP35968 1356 aa15.96■□□□□ 0.14
NPHP4-207ENST00000470763 TAF5LO75529 589 aa15.95■□□□□ 0.14
NPHP4-207ENST00000470763 LRRFIP1Q32MZ4 808 aaKnown RBP15.95■□□□□ 0.14
NPHP4-207ENST00000470763 CCDC158Q5M9N0 1113 aa15.95■□□□□ 0.14
NPHP4-207ENST00000470763 FMR1NBQ8N0W7 255 aaPredicted RBP15.95■□□□□ 0.14
NPHP4-207ENST00000470763 MRPS27Q92552 414 aaKnown RBP15.95■□□□□ 0.14
NPHP4-207ENST00000470763 NCOA5Q9HCD5 579 aaKnown RBP15.95■□□□□ 0.14
NPHP4-207ENST00000470763 HMG20BQ9P0W2 317 aa15.95■□□□□ 0.14
NPHP4-207ENST00000470763 IGSF1Q8N6C5 1336 aa15.95■□□□□ 0.14
NPHP4-207ENST00000470763 MYH15Q9Y2K3 1946 aa15.95■□□□□ 0.14
NPHP4-207ENST00000470763 PTPDC1A2A3K4 754 aa15.95■□□□□ 0.14
NPHP4-207ENST00000470763 CWF19L2Q2TBE0 894 aaKnown RBP15.95■□□□□ 0.14
NPHP4-207ENST00000470763 NSUN7Q8NE18 718 aaKnown RBP15.95■□□□□ 0.14
NPHP4-207ENST00000470763 KIAA1468Q9P260 1216 aa15.95■□□□□ 0.14
NPHP4-207ENST00000470763 ERC1Q8IUD2 1116 aa15.94■□□□□ 0.14
NPHP4-207ENST00000470763 ADAM21Q9UKJ8 722 aa15.94■□□□□ 0.14
NPHP4-207ENST00000470763 COL15A1P39059 1388 aa15.94■□□□□ 0.14
NPHP4-207ENST00000470763 CTDNEP1O95476 244 aa15.94■□□□□ 0.14
NPHP4-207ENST00000470763 KLHDC4Q8TBB5 520 aa15.94■□□□□ 0.14
NPHP4-207ENST00000470763 ZNF396Q96N95 335 aaPredicted RBP15.94■□□□□ 0.14
NPHP4-207ENST00000470763 FLT4P35916 1363 aa15.94■□□□□ 0.14
NPHP4-207ENST00000470763 FANCCQ00597 558 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms