RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 COA1Q9GZY4 146 aa12.17□□□□□ -0.46
SRRT-208ENST00000469602 ZBTB12Q9Y330 459 aaPredicted RBP12.17□□□□□ -0.46
SRRT-208ENST00000469602 RPS12P25398 132 aaKnown RBP12.16□□□□□ -0.46
SRRT-208ENST00000469602 RFX5P48382 616 aaPredicted RBP12.16□□□□□ -0.46
SRRT-208ENST00000469602 LRRC24Q50LG9 513 aa12.16□□□□□ -0.46
SRRT-208ENST00000469602 USP50Q70EL3 339 aaPredicted RBP12.16□□□□□ -0.46
SRRT-208ENST00000469602 DPF2Q92785 391 aa12.16□□□□□ -0.46
SRRT-208ENST00000469602 ADARB2Q9NS39 739 aaKnown RBP12.16□□□□□ -0.46
SRRT-208ENST00000469602 CNOT7Q9UIV1 285 aaKnown RBP12.16□□□□□ -0.46
SRRT-208ENST00000469602 RCAN3Q9UKA8 241 aa12.16□□□□□ -0.46
SRRT-208ENST00000469602 CLEC11AQ9Y240 323 aa12.16□□□□□ -0.46
SRRT-208ENST00000469602 ZNF609O15014 1411 aa12.16□□□□□ -0.46
SRRT-208ENST00000469602 USP17L3A6NCW0 530 aa12.15□□□□□ -0.46
SRRT-208ENST00000469602 USP17L4A6NCW7 530 aa12.15□□□□□ -0.46
SRRT-208ENST00000469602 GNAI2P04899 355 aa12.15□□□□□ -0.46
SRRT-208ENST00000469602 RLBP1P12271 317 aa12.15□□□□□ -0.46
SRRT-208ENST00000469602 PTPN12Q05209 780 aaKnown RBP12.15□□□□□ -0.46
SRRT-208ENST00000469602 UBE4AQ14139 1066 aa12.15□□□□□ -0.46
SRRT-208ENST00000469602 METTL24Q5JXM2 366 aa12.15□□□□□ -0.46
SRRT-208ENST00000469602 USP17L1Q7RTZ2 530 aa12.15□□□□□ -0.46
SRRT-208ENST00000469602 MICALL2Q8IY33 904 aa12.15□□□□□ -0.46
SRRT-208ENST00000469602 VGLL2Q8N8G2 317 aa12.15□□□□□ -0.46
SRRT-208ENST00000469602 SHTN1A0MZ66 631 aa12.14□□□□□ -0.47
SRRT-208ENST00000469602 H7C1D1 291 aa12.14□□□□□ -0.47
SRRT-208ENST00000469602 EYA2O00167 538 aa12.14□□□□□ -0.47
SRRT-208ENST00000469602 PDE8BO95263 885 aa12.14□□□□□ -0.47
SRRT-208ENST00000469602 APLP1P51693 650 aa12.14□□□□□ -0.47
SRRT-208ENST00000469602 MTX1Q13505 466 aa12.14□□□□□ -0.47
SRRT-208ENST00000469602 RSBN1LQ6PCB5 846 aaPredicted RBP12.14□□□□□ -0.47
SRRT-208ENST00000469602 ZNF804AQ7Z570 1209 aa12.14□□□□□ -0.47
SRRT-208ENST00000469602 ITPRIPQ8IWB1 547 aa12.14□□□□□ -0.47
SRRT-208ENST00000469602 AGBL3Q8NEM8 1001 aa12.14□□□□□ -0.47
SRRT-208ENST00000469602 FBXO3Q9UK99 471 aa12.14□□□□□ -0.47
SRRT-208ENST00000469602 PCNTO95613 3336 aa12.13□□□□□ -0.47
SRRT-208ENST00000469602 POLR2AP24928 1970 aaKnown RBP12.13□□□□□ -0.47
SRRT-208ENST00000469602 SRGAP3O43295 1099 aa12.13□□□□□ -0.47
SRRT-208ENST00000469602 CIAO1O76071 339 aa12.13□□□□□ -0.47
SRRT-208ENST00000469602 DACT2Q5SW24 774 aa12.13□□□□□ -0.47
SRRT-208ENST00000469602 STRIP1Q5VSL9 837 aa12.13□□□□□ -0.47
SRRT-208ENST00000469602 MAP1SQ66K74 1059 aaPredicted RBP12.13□□□□□ -0.47
SRRT-208ENST00000469602 ATG9AQ7Z3C6 839 aa12.13□□□□□ -0.47
SRRT-208ENST00000469602 CD209Q9NNX6 404 aa12.13□□□□□ -0.47
SRRT-208ENST00000469602 ITGBL1O95965 494 aaPredicted RBP12.12□□□□□ -0.47
SRRT-208ENST00000469602 MS4A1P11836 297 aa12.12□□□□□ -0.47
SRRT-208ENST00000469602 IL1R1P14778 569 aa12.12□□□□□ -0.47
SRRT-208ENST00000469602 HIRAP54198 1017 aaPredicted RBP12.12□□□□□ -0.47
SRRT-208ENST00000469602 PUM3Q15397 648 aaKnown RBP12.12□□□□□ -0.47
SRRT-208ENST00000469602 TTLL5Q6EMB2 1281 aa12.12□□□□□ -0.47
SRRT-208ENST00000469602 CNTROBQ8N137 903 aa12.12□□□□□ -0.47
SRRT-208ENST00000469602 TRPM4Q8TD43 1214 aa12.12□□□□□ -0.47
SRRT-208ENST00000469602 PANK1Q8TE04 598 aa12.12□□□□□ -0.47
SRRT-208ENST00000469602 FBXW7Q969H0 707 aa12.12□□□□□ -0.47
SRRT-208ENST00000469602 YTHDC1Q96MU7 727 aaKnown RBP12.12□□□□□ -0.47
SRRT-208ENST00000469602 GMLQ99445 158 aa12.12□□□□□ -0.47
SRRT-208ENST00000469602 SIL1Q9H173 461 aa12.12□□□□□ -0.47
SRRT-208ENST00000469602 COPRSQ9NQ92 184 aa12.12□□□□□ -0.47
SRRT-208ENST00000469602 MYO3BQ8WXR4 1341 aa12.11□□□□□ -0.47
SRRT-208ENST00000469602 PASKQ96RG2 1323 aa12.11□□□□□ -0.47
SRRT-208ENST00000469602 TRPM7Q96QT4 1865 aa12.11□□□□□ -0.47
SRRT-208ENST00000469602 ZBTB7BO15156 539 aaPredicted RBP12.11□□□□□ -0.47
SRRT-208ENST00000469602 EGFRP00533 1210 aa12.11□□□□□ -0.47
SRRT-208ENST00000469602 USP17L8P0C7I0 530 aa12.11□□□□□ -0.47
SRRT-208ENST00000469602 IL15P40933 162 aaPredicted RBP12.11□□□□□ -0.47
SRRT-208ENST00000469602 GYG1P46976 350 aa12.11□□□□□ -0.47
SRRT-208ENST00000469602 ZNF280AP59817 542 aaPredicted RBP12.11□□□□□ -0.47
SRRT-208ENST00000469602 GTF2IP78347 998 aa12.11□□□□□ -0.47
SRRT-208ENST00000469602 TBC1D10BQ4KMP7 808 aaPredicted RBP12.11□□□□□ -0.47
SRRT-208ENST00000469602 SAMD7Q7Z3H4 446 aa12.11□□□□□ -0.47
SRRT-208ENST00000469602 ZC3H15Q8WU90 426 aaKnown RBP12.11□□□□□ -0.47
SRRT-208ENST00000469602 FAM84BQ96KN1 310 aaPredicted RBP12.11□□□□□ -0.47
SRRT-208ENST00000469602 MXD3Q9BW11 206 aa12.11□□□□□ -0.47
SRRT-208ENST00000469602 PA2G4Q9UQ80 394 aaKnown RBP12.11□□□□□ -0.47
SRRT-208ENST00000469602 MYH13Q9UKX3 1938 aa12.11□□□□□ -0.47
SRRT-208ENST00000469602 PNMA6EA0A0J9YXQ4 647 aa12.1□□□□□ -0.47
SRRT-208ENST00000469602 FGFR2P21802 821 aa12.1□□□□□ -0.47
SRRT-208ENST00000469602 HIBADHP31937 336 aaKnown RBP12.1□□□□□ -0.47
SRRT-208ENST00000469602 PGAP2Q9UHJ9 254 aa12.1□□□□□ -0.47
SRRT-208ENST00000469602 ARAP2Q8WZ64 1704 aa12.1□□□□□ -0.47
SRRT-208ENST00000469602 SASH1O94885 1247 aa12.09□□□□□ -0.47
SRRT-208ENST00000469602 IFIT1P09914 478 aaKnown RBP12.09□□□□□ -0.47
SRRT-208ENST00000469602 HTRA3P83110 453 aa12.09□□□□□ -0.47
SRRT-208ENST00000469602 MVPQ14764 893 aaKnown RBP12.09□□□□□ -0.47
SRRT-208ENST00000469602 KIF4BQ2VIQ3 1234 aa12.09□□□□□ -0.47
SRRT-208ENST00000469602 CAVIN4Q5BKX8 364 aa12.09□□□□□ -0.47
SRRT-208ENST00000469602 RBM26Q5T8P6 1007 aaKnown RBP12.09□□□□□ -0.47
SRRT-208ENST00000469602 FBXO33Q7Z6M2 555 aa12.09□□□□□ -0.47
SRRT-208ENST00000469602 VPS37DQ86XT2 251 aa12.09□□□□□ -0.47
SRRT-208ENST00000469602 OGFOD1Q8N543 542 aa12.09□□□□□ -0.47
SRRT-208ENST00000469602 TDRD7Q8NHU6 1098 aaKnown RBP12.09□□□□□ -0.47
SRRT-208ENST00000469602 LPIN2Q92539 896 aa12.09□□□□□ -0.47
SRRT-208ENST00000469602 C1orf115Q9H7X2 142 aa12.09□□□□□ -0.47
SRRT-208ENST00000469602 MYOZ2Q9NPC6 264 aa12.09□□□□□ -0.47
SRRT-208ENST00000469602 CEP126Q9P2H0 1117 aa12.09□□□□□ -0.47
SRRT-208ENST00000469602 SLC5A1P13866 664 aa12.08□□□□□ -0.48
SRRT-208ENST00000469602 MMP14P50281 582 aa12.08□□□□□ -0.48
SRRT-208ENST00000469602 FKBP1AP62942 108 aaKnown RBP12.08□□□□□ -0.48
SRRT-208ENST00000469602 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.08□□□□□ -0.48
SRRT-208ENST00000469602 CREBZFQ9NS37 354 aa12.08□□□□□ -0.48
SRRT-208ENST00000469602 FAM205AQ6ZU69 1335 aa12.08□□□□□ -0.48
SRRT-208ENST00000469602 BCAMP50895 628 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms