RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 SAMD7Q7Z3H4 446 aa24.06■■□□□ 1.44
USP11-205ENST00000467378 KRT26Q7Z3Y9 468 aa24.06■■□□□ 1.44
USP11-205ENST00000467378 CTU1Q7Z7A3 348 aaKnown RBP24.06■■□□□ 1.44
USP11-205ENST00000467378 BBOX1O75936 387 aa24.05■■□□□ 1.44
USP11-205ENST00000467378 DZIP1LQ8IYY4 767 aaKnown RBP24.05■■□□□ 1.44
USP11-205ENST00000467378 ZBTB12Q9Y330 459 aaPredicted RBP24.05■■□□□ 1.44
USP11-205ENST00000467378 YDJCA8MPS7 323 aa24.04■■□□□ 1.44
USP11-205ENST00000467378 PLIN1O60240 522 aa24.04■■□□□ 1.44
USP11-205ENST00000467378 FOXO4P98177 505 aa24.04■■□□□ 1.44
USP11-205ENST00000467378 TBC1D10BQ4KMP7 808 aaPredicted RBP24.04■■□□□ 1.44
USP11-205ENST00000467378 TMEM57Q8N5G2 664 aa24.04■■□□□ 1.44
USP11-205ENST00000467378 TTLL11Q8NHH1 800 aa24.04■■□□□ 1.44
USP11-205ENST00000467378 CSF1RP07333 972 aa24.03■■□□□ 1.44
USP11-205ENST00000467378 RLBP1P12271 317 aa24.03■■□□□ 1.44
USP11-205ENST00000467378 CTSWP56202 376 aa24.03■■□□□ 1.44
USP11-205ENST00000467378 DCPSQ96C86 337 aaKnown RBP24.03■■□□□ 1.44
USP11-205ENST00000467378 KAZALD1Q96I82 304 aa24.03■■□□□ 1.44
USP11-205ENST00000467378 COL4A1P02462 1669 aa24.02■■□□□ 1.44
USP11-205ENST00000467378 ADM5C9JUS6 153 aa24.02■■□□□ 1.44
USP11-205ENST00000467378 EPHA10Q5JZY3 1008 aa24.02■■□□□ 1.44
USP11-205ENST00000467378 RBM26Q5T8P6 1007 aaKnown RBP24.02■■□□□ 1.44
USP11-205ENST00000467378 DDX46Q7L014 1031 aaKnown RBP24.02■■□□□ 1.44
USP11-205ENST00000467378 SUCLG2Q96I99 432 aa24.02■■□□□ 1.44
USP11-205ENST00000467378 CCDC152Q4G0S7 254 aa24.01■■□□□ 1.43
USP11-205ENST00000467378 FTSJ3Q8IY81 847 aaKnown RBP24.01■■□□□ 1.43
USP11-205ENST00000467378 DPF2Q92785 391 aa24.01■■□□□ 1.43
USP11-205ENST00000467378 CSRNP1Q96S65 589 aa24.01■■□□□ 1.43
USP11-205ENST00000467378 MS4A1P11836 297 aa24■■□□□ 1.43
USP11-205ENST00000467378 CCDC85AQ96PX6 553 aaPredicted RBP24■■□□□ 1.43
USP11-205ENST00000467378 SEC31BQ9NQW1 1179 aa24■■□□□ 1.43
USP11-205ENST00000467378 HPS5Q9UPZ3 1129 aa24■■□□□ 1.43
USP11-205ENST00000467378 DUOX1Q9NRD9 1551 aa23.99■■□□□ 1.43
USP11-205ENST00000467378 PSMD14O00487 310 aa23.99■■□□□ 1.43
USP11-205ENST00000467378 SLC10A3P09131 477 aa23.99■■□□□ 1.43
USP11-205ENST00000467378 GRAPQ13588 217 aa23.99■■□□□ 1.43
USP11-205ENST00000467378 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.99■■□□□ 1.43
USP11-205ENST00000467378 GRAPLQ8TC17 118 aaPredicted RBP23.99■■□□□ 1.43
USP11-205ENST00000467378 PANK1Q8TE04 598 aa23.99■■□□□ 1.43
USP11-205ENST00000467378 MEIS3Q99687 375 aa23.99■■□□□ 1.43
USP11-205ENST00000467378 SPEF2Q9C093 1822 aa23.98■■□□□ 1.43
USP11-205ENST00000467378 EGFRP00533 1210 aa23.98■■□□□ 1.43
USP11-205ENST00000467378 CELF1Q92879 486 aaKnown RBP23.98■■□□□ 1.43
USP11-205ENST00000467378 GREM2Q9H772 168 aa23.98■■□□□ 1.43
USP11-205ENST00000467378 DBNDD1Q9H9R9 158 aa23.98■■□□□ 1.43
USP11-205ENST00000467378 RTL9Q8NET4 1388 aa23.98■■□□□ 1.43
USP11-205ENST00000467378 LRRC37AA6NMS7 1700 aa23.98■■□□□ 1.43
USP11-205ENST00000467378 LMBR1LQ6UX01 489 aa23.97■■□□□ 1.43
USP11-205ENST00000467378 UBTFL1P0CB47 393 aaPredicted RBP23.96■■□□□ 1.43
USP11-205ENST00000467378 RABL6Q3YEC7 729 aaPredicted RBP23.96■■□□□ 1.43
USP11-205ENST00000467378 BICC1Q9H694 974 aaKnown RBP23.96■■□□□ 1.43
USP11-205ENST00000467378 HDAC9Q9UKV0 1011 aa23.96■■□□□ 1.43
USP11-205ENST00000467378 GNAI3P08754 354 aa23.95■■□□□ 1.42
USP11-205ENST00000467378 PDE3AQ14432 1141 aa23.95■■□□□ 1.42
USP11-205ENST00000467378 WASHC4Q2M389 1173 aa23.95■■□□□ 1.42
USP11-205ENST00000467378 ITPRIPQ8IWB1 547 aa23.95■■□□□ 1.42
USP11-205ENST00000467378 SULF1Q8IWU6 871 aa23.95■■□□□ 1.42
USP11-205ENST00000467378 REM2Q8IYK8 340 aaPredicted RBP23.95■■□□□ 1.42
USP11-205ENST00000467378 ANKRD44Q8N8A2 993 aa23.95■■□□□ 1.42
USP11-205ENST00000467378 RIMBP2O15034 1052 aa23.94■■□□□ 1.42
USP11-205ENST00000467378 ZBTB7BO15156 539 aaPredicted RBP23.94■■□□□ 1.42
USP11-205ENST00000467378 RPS8P62241 208 aaKnown RBP23.94■■□□□ 1.42
USP11-205ENST00000467378 PKN2Q16513 984 aaKnown RBP23.94■■□□□ 1.42
USP11-205ENST00000467378 C20orf194Q5TEA3 1177 aa23.94■■□□□ 1.42
USP11-205ENST00000467378 ITGA6P23229 1130 aa23.93■■□□□ 1.42
USP11-205ENST00000467378 RPS12P25398 132 aaKnown RBP23.93■■□□□ 1.42
USP11-205ENST00000467378 RRP1P56182 461 aaKnown RBP23.93■■□□□ 1.42
USP11-205ENST00000467378 TMC4Q7Z404 712 aa23.93■■□□□ 1.42
USP11-205ENST00000467378 GCC1Q96CN9 775 aa23.93■■□□□ 1.42
USP11-205ENST00000467378 GGA3Q9NZ52 723 aa23.93■■□□□ 1.42
USP11-205ENST00000467378 KIF4BQ2VIQ3 1234 aa23.92■■□□□ 1.42
USP11-205ENST00000467378 RASAL3Q86YV0 1011 aa23.92■■□□□ 1.42
USP11-205ENST00000467378 CDCA5Q96FF9 252 aa23.92■■□□□ 1.42
USP11-205ENST00000467378 CDC5LQ99459 802 aaKnown RBP23.92■■□□□ 1.42
USP11-205ENST00000467378 NSFL1CQ9UNZ2 370 aaKnown RBP23.92■■□□□ 1.42
USP11-205ENST00000467378 HDAC5Q9UQL6 1122 aa23.92■■□□□ 1.42
USP11-205ENST00000467378 LRRFIP2Q9Y608 721 aaKnown RBP23.92■■□□□ 1.42
USP11-205ENST00000467378 C6orf229H3BNL8 230 aa23.91■■□□□ 1.42
USP11-205ENST00000467378 MVPQ14764 893 aaKnown RBP23.91■■□□□ 1.42
USP11-205ENST00000467378 ANKRD18AQ8IVF6 992 aa23.91■■□□□ 1.42
USP11-205ENST00000467378 COG6Q9Y2V7 657 aa23.91■■□□□ 1.42
USP11-205ENST00000467378 CHMP3Q9Y3E7 222 aa23.91■■□□□ 1.42
USP11-205ENST00000467378 ANKRD18BA2A2Z9 1011 aa23.9■■□□□ 1.42
USP11-205ENST00000467378 ECE2O60344 883 aa23.9■■□□□ 1.42
USP11-205ENST00000467378 IFIT5Q13325 482 aaKnown RBP23.9■■□□□ 1.42
USP11-205ENST00000467378 DOK7Q18PE1 504 aa23.9■■□□□ 1.42
USP11-205ENST00000467378 KCNQ5Q9NR82 932 aa23.9■■□□□ 1.42
USP11-205ENST00000467378 SCN9AQ15858 1988 aa23.9■■□□□ 1.42
USP11-205ENST00000467378 ZNF296Q8WUU4 475 aaPredicted RBP23.89■■□□□ 1.41
USP11-205ENST00000467378 PAPPA2Q9BXP8 1791 aa23.88■■□□□ 1.41
USP11-205ENST00000467378 ASTN2O75129 1339 aaPredicted RBP23.88■■□□□ 1.41
USP11-205ENST00000467378 TBC1D8O95759 1140 aa23.88■■□□□ 1.41
USP11-205ENST00000467378 GNAI2P04899 355 aa23.88■■□□□ 1.41
USP11-205ENST00000467378 CCDC57Q2TAC2 916 aa23.88■■□□□ 1.41
USP11-205ENST00000467378 BSDC1Q9NW68 430 aaPredicted RBP23.87■■□□□ 1.41
USP11-205ENST00000467378 DDX19BQ9UMR2 479 aa23.87■■□□□ 1.41
USP11-205ENST00000467378 A0A1B0GUL6 1792 aa23.86■■□□□ 1.41
USP11-205ENST00000467378 IGHMBP2P38935 993 aaKnown RBP23.86■■□□□ 1.41
USP11-205ENST00000467378 ZNF594Q96JF6 807 aaPredicted RBP23.86■■□□□ 1.41
USP11-205ENST00000467378 EYA3Q99504 573 aa23.86■■□□□ 1.41
USP11-205ENST00000467378 POLLQ9UGP5 575 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms