RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 PODXL2Q9NZ53 605 aa13.17□□□□□ -0.3
NUP188-204ENST00000467044 DBNLQ9UJU6 430 aaKnown RBP13.17□□□□□ -0.3
NUP188-204ENST00000467044 MX1P20591 662 aa13.16□□□□□ -0.3
NUP188-204ENST00000467044 CCDC158Q5M9N0 1113 aa13.16□□□□□ -0.3
NUP188-204ENST00000467044 SOGA3Q5TF21 947 aa13.16□□□□□ -0.3
NUP188-204ENST00000467044 PLEKHM2Q8IWE5 1019 aa13.16□□□□□ -0.3
NUP188-204ENST00000467044 POLLQ9UGP5 575 aa13.16□□□□□ -0.3
NUP188-204ENST00000467044 RIMBP2O15034 1052 aa13.15□□□□□ -0.3
NUP188-204ENST00000467044 KLRK1P26718 216 aa13.15□□□□□ -0.3
NUP188-204ENST00000467044 PDE1AP54750 535 aa13.15□□□□□ -0.3
NUP188-204ENST00000467044 GRIPAP1Q4V328 841 aa13.15□□□□□ -0.3
NUP188-204ENST00000467044 CAVIN4Q5BKX8 364 aa13.15□□□□□ -0.3
NUP188-204ENST00000467044 TTC39AQ5SRH9 613 aa13.15□□□□□ -0.3
NUP188-204ENST00000467044 TSHZ3Q63HK5 1081 aa13.15□□□□□ -0.3
NUP188-204ENST00000467044 VPS37DQ86XT2 251 aa13.15□□□□□ -0.3
NUP188-204ENST00000467044 RTKN2Q8IZC4 609 aa13.15□□□□□ -0.3
NUP188-204ENST00000467044 ECHDC1Q9NTX5 307 aa13.15□□□□□ -0.3
NUP188-204ENST00000467044 GYG1P46976 350 aa13.14□□□□□ -0.31
NUP188-204ENST00000467044 BCAMP50895 628 aa13.14□□□□□ -0.31
NUP188-204ENST00000467044 WASHC4Q2M389 1173 aa13.14□□□□□ -0.31
NUP188-204ENST00000467044 SUPT20HQ8NEM7 779 aa13.14□□□□□ -0.31
NUP188-204ENST00000467044 EYA3Q99504 573 aa13.14□□□□□ -0.31
NUP188-204ENST00000467044 ZC3H12CQ9C0D7 883 aaKnown RBP13.14□□□□□ -0.31
NUP188-204ENST00000467044 TTC41PQ6P2S7 1318 aa13.13□□□□□ -0.31
NUP188-204ENST00000467044 SALL3Q9BXA9 1300 aa13.13□□□□□ -0.31
NUP188-204ENST00000467044 G3V3G9 751 aa13.13□□□□□ -0.31
NUP188-204ENST00000467044 ERC2O15083 957 aa13.13□□□□□ -0.31
NUP188-204ENST00000467044 HIBADHP31937 336 aaKnown RBP13.13□□□□□ -0.31
NUP188-204ENST00000467044 PHKA1P46020 1223 aa13.13□□□□□ -0.31
NUP188-204ENST00000467044 DCAF8Q5TAQ9 597 aa13.13□□□□□ -0.31
NUP188-204ENST00000467044 CCDC102BQ68D86 513 aa13.13□□□□□ -0.31
NUP188-204ENST00000467044 TXNRD3Q86VQ6 643 aa13.13□□□□□ -0.31
NUP188-204ENST00000467044 FAM84BQ96KN1 310 aaPredicted RBP13.13□□□□□ -0.31
NUP188-204ENST00000467044 STAP2Q9UGK3 403 aa13.13□□□□□ -0.31
NUP188-204ENST00000467044 ARFGEF1Q9Y6D6 1849 aa13.12□□□□□ -0.31
NUP188-204ENST00000467044 FRAT2O75474 233 aaPredicted RBP13.12□□□□□ -0.31
NUP188-204ENST00000467044 FKBP4Q02790 459 aaKnown RBP eCLIP13.12□□□□□ -0.31
NUP188-204ENST00000467044 ZNF804AQ7Z570 1209 aa13.12□□□□□ -0.31
NUP188-204ENST00000467044 RTFDC1Q9BY42 306 aaPredicted RBP13.12□□□□□ -0.31
NUP188-204ENST00000467044 BOLA2Q9H3K6 86 aa13.12□□□□□ -0.31
NUP188-204ENST00000467044 OSBPL3Q9H4L5 887 aa13.12□□□□□ -0.31
NUP188-204ENST00000467044 GNL3LQ9NVN8 582 aaKnown RBP13.12□□□□□ -0.31
NUP188-204ENST00000467044 IQSEC3Q9UPP2 1182 aaPredicted RBP13.12□□□□□ -0.31
NUP188-204ENST00000467044 LTBP1Q14766 1721 aa13.12□□□□□ -0.31
NUP188-204ENST00000467044 ARAP2Q8WZ64 1704 aa13.12□□□□□ -0.31
NUP188-204ENST00000467044 MED23Q9ULK4 1368 aa13.11□□□□□ -0.31
NUP188-204ENST00000467044 PPIP5K2O43314 1243 aa13.11□□□□□ -0.31
NUP188-204ENST00000467044 GLRX3O76003 335 aaKnown RBP13.11□□□□□ -0.31
NUP188-204ENST00000467044 UQCRFS1P1P0C7P4 283 aa13.11□□□□□ -0.31
NUP188-204ENST00000467044 ATP5JP18859 108 aa13.11□□□□□ -0.31
NUP188-204ENST00000467044 ARHGAP27Q6ZUM4 889 aa13.11□□□□□ -0.31
NUP188-204ENST00000467044 C15orf52Q6ZUT6 534 aaKnown RBP13.11□□□□□ -0.31
NUP188-204ENST00000467044 FBXO33Q7Z6M2 555 aa13.11□□□□□ -0.31
NUP188-204ENST00000467044 PI4K2BQ8TCG2 481 aa13.11□□□□□ -0.31
NUP188-204ENST00000467044 PSMD1Q99460 953 aa13.11□□□□□ -0.31
NUP188-204ENST00000467044 DUOX1Q9NRD9 1551 aa13.11□□□□□ -0.31
NUP188-204ENST00000467044 AOX1Q06278 1338 aa13.11□□□□□ -0.31
NUP188-204ENST00000467044 IRS2Q9Y4H2 1338 aa13.11□□□□□ -0.31
NUP188-204ENST00000467044 TRIM6-TRIM34B2RNG4 842 aa13.1□□□□□ -0.31
NUP188-204ENST00000467044 MAP4K4O95819 1239 aaPredicted RBP13.1□□□□□ -0.31
NUP188-204ENST00000467044 GPR162Q16538 588 aa13.1□□□□□ -0.31
NUP188-204ENST00000467044 AOC3Q16853 763 aa13.1□□□□□ -0.31
NUP188-204ENST00000467044 DOK7Q18PE1 504 aa13.1□□□□□ -0.31
NUP188-204ENST00000467044 TTC22Q5TAA0 569 aa13.1□□□□□ -0.31
NUP188-204ENST00000467044 DNAJC2Q99543 621 aaKnown RBP13.1□□□□□ -0.31
NUP188-204ENST00000467044 TAOK3Q9H2K8 898 aa13.1□□□□□ -0.31
NUP188-204ENST00000467044 SNRKQ9NRH2 765 aa13.1□□□□□ -0.31
NUP188-204ENST00000467044 ZNF277Q9NRM2 450 aaPredicted RBP13.1□□□□□ -0.31
NUP188-204ENST00000467044 SNED1Q8TER0 1413 aa13.1□□□□□ -0.31
NUP188-204ENST00000467044 FER1L6Q2WGJ9 1857 aa13.1□□□□□ -0.31
NUP188-204ENST00000467044 NFKBIEO00221 500 aa13.09□□□□□ -0.31
NUP188-204ENST00000467044 ARID4AP29374 1257 aaPredicted RBP13.09□□□□□ -0.31
NUP188-204ENST00000467044 RASSF7Q02833 373 aa13.09□□□□□ -0.31
NUP188-204ENST00000467044 SCARF1Q14162 830 aa13.09□□□□□ -0.31
NUP188-204ENST00000467044 LARGE2Q8N3Y3 721 aa13.09□□□□□ -0.31
NUP188-204ENST00000467044 RILPL2Q969X0 211 aa13.09□□□□□ -0.31
NUP188-204ENST00000467044 ZNF512BQ96KM6 892 aaPredicted RBP13.09□□□□□ -0.31
NUP188-204ENST00000467044 COA1Q9GZY4 146 aa13.09□□□□□ -0.31
NUP188-204ENST00000467044 CD209Q9NNX6 404 aa13.09□□□□□ -0.31
NUP188-204ENST00000467044 NDUFB9Q9Y6M9 179 aa13.09□□□□□ -0.31
NUP188-204ENST00000467044 YBX3P16989 372 aaKnown RBP eCLIP13.08□□□□□ -0.323e-6■□□□□ 8.1
NUP188-204ENST00000467044 IARSP41252 1262 aaKnown RBP13.08□□□□□ -0.32
NUP188-204ENST00000467044 MCAMP43121 646 aa13.08□□□□□ -0.32
NUP188-204ENST00000467044 ZAP70P43403 619 aa13.08□□□□□ -0.32
NUP188-204ENST00000467044 KIAA2012Q0VF49 1180 aa13.08□□□□□ -0.32
NUP188-204ENST00000467044 CHAF1AQ13111 956 aaPredicted RBP13.08□□□□□ -0.32
NUP188-204ENST00000467044 RASGRF1Q13972 1273 aa13.08□□□□□ -0.32
NUP188-204ENST00000467044 PI16Q6UXB8 463 aa13.08□□□□□ -0.32
NUP188-204ENST00000467044 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.08□□□□□ -0.32
NUP188-204ENST00000467044 FBXW7Q969H0 707 aa13.08□□□□□ -0.32
NUP188-204ENST00000467044 HAUS7Q99871 368 aa13.08□□□□□ -0.32
NUP188-204ENST00000467044 DBNDD1Q9H9R9 158 aa13.08□□□□□ -0.32
NUP188-204ENST00000467044 HMG20BQ9P0W2 317 aa13.08□□□□□ -0.32
NUP188-204ENST00000467044 DENND2AQ9ULE3 1009 aa13.08□□□□□ -0.32
NUP188-204ENST00000467044 MYH13Q9UKX3 1938 aa13.07□□□□□ -0.32
NUP188-204ENST00000467044 GOLIM4O00461 696 aa13.07□□□□□ -0.32
NUP188-204ENST00000467044 SEMA3EO15041 775 aa13.07□□□□□ -0.32
NUP188-204ENST00000467044 ECE2O60344 883 aa13.07□□□□□ -0.32
NUP188-204ENST00000467044 GSPT1P15170 499 aaKnown RBP13.07□□□□□ -0.32
NUP188-204ENST00000467044 SPATA5Q8NB90 893 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms