RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 AKAP11Q9UKA4 1901 aa16.19■□□□□ 0.18
UBE4B-206ENST00000466379 GNPATO15228 680 aa16.19■□□□□ 0.18
UBE4B-206ENST00000466379 BRD1O95696 1058 aa16.19■□□□□ 0.18
UBE4B-206ENST00000466379 ST3GAL1Q11201 340 aa16.19■□□□□ 0.18
UBE4B-206ENST00000466379 ME3Q16798 604 aa16.19■□□□□ 0.18
UBE4B-206ENST00000466379 WASHC4Q2M389 1173 aa16.19■□□□□ 0.18
UBE4B-206ENST00000466379 NECAB1Q8N987 351 aa16.19■□□□□ 0.18
UBE4B-206ENST00000466379 BCL2L12Q9HB09 334 aa16.19■□□□□ 0.18
UBE4B-206ENST00000466379 PUM3Q15397 648 aaKnown RBP16.19■□□□□ 0.18
UBE4B-206ENST00000466379 TSGA10IPQ3SY00 556 aa16.19■□□□□ 0.18
UBE4B-206ENST00000466379 CCDC102BQ68D86 513 aa16.19■□□□□ 0.18
UBE4B-206ENST00000466379 CLEC4GQ6UXB4 293 aa16.19■□□□□ 0.18
UBE4B-206ENST00000466379 GOLGA6L22H0YM25 854 aa16.18■□□□□ 0.18
UBE4B-206ENST00000466379 HSPD1P10809 573 aaKnown RBP16.18■□□□□ 0.18
UBE4B-206ENST00000466379 FGFR2P21802 821 aa16.18■□□□□ 0.18
UBE4B-206ENST00000466379 STOX1Q6ZVD7 989 aa16.18■□□□□ 0.18
UBE4B-206ENST00000466379 ABCC12Q96J65 1359 aa16.18■□□□□ 0.18
UBE4B-206ENST00000466379 SCN7AQ01118 1682 aa16.18■□□□□ 0.18
UBE4B-206ENST00000466379 FOXD4L6Q3SYB3 417 aaPredicted RBP16.17■□□□□ 0.18
UBE4B-206ENST00000466379 FOXD4L3Q6VB84 417 aaPredicted RBP16.17■□□□□ 0.18
UBE4B-206ENST00000466379 SEPT12Q8IYM1 358 aa16.17■□□□□ 0.18
UBE4B-206ENST00000466379 LPIN2Q92539 896 aa16.17■□□□□ 0.18
UBE4B-206ENST00000466379 MYO5AQ9Y4I1 1855 aaKnown RBP16.17■□□□□ 0.18
UBE4B-206ENST00000466379 IGHMBP2P38935 993 aaKnown RBP16.17■□□□□ 0.18
UBE4B-206ENST00000466379 TOB2Q14106 344 aaPredicted RBP16.17■□□□□ 0.18
UBE4B-206ENST00000466379 NEK1Q96PY6 1258 aa16.17■□□□□ 0.18
UBE4B-206ENST00000466379 DSCC1Q9BVC3 393 aa16.17■□□□□ 0.18
UBE4B-206ENST00000466379 PIH1D3Q9NQM4 214 aaKnown RBP16.17■□□□□ 0.18
UBE4B-206ENST00000466379 RPS6KA4O75676 772 aa16.16■□□□□ 0.18
UBE4B-206ENST00000466379 CCDC24Q8N4L8 307 aa16.16■□□□□ 0.18
UBE4B-206ENST00000466379 ZSCAN31Q96LW9 406 aaPredicted RBP16.16■□□□□ 0.18
UBE4B-206ENST00000466379 PUS7LQ9H0K6 701 aaKnown RBP16.16■□□□□ 0.18
UBE4B-206ENST00000466379 SMC3Q9UQE7 1217 aa16.16■□□□□ 0.18
UBE4B-206ENST00000466379 TAF1P21675 1872 aa16.16■□□□□ 0.18
UBE4B-206ENST00000466379 ARAP2Q8WZ64 1704 aa16.16■□□□□ 0.18
UBE4B-206ENST00000466379 CASZ1Q86V15 1759 aa16.16■□□□□ 0.18
UBE4B-206ENST00000466379 SBF2Q86WG5 1849 aa16.16■□□□□ 0.18
UBE4B-206ENST00000466379 MYH7P12883 1935 aa16.16■□□□□ 0.18
UBE4B-206ENST00000466379 KRT32Q14532 448 aa16.16■□□□□ 0.18
UBE4B-206ENST00000466379 RC3H1Q5TC82 1133 aaKnown RBP16.16■□□□□ 0.18
UBE4B-206ENST00000466379 TTLL5Q6EMB2 1281 aa16.16■□□□□ 0.18
UBE4B-206ENST00000466379 LRRC2Q9BYS8 371 aa16.16■□□□□ 0.18
UBE4B-206ENST00000466379 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.16■□□□□ 0.18
UBE4B-206ENST00000466379 ATRNO75882 1429 aa16.16■□□□□ 0.18
UBE4B-206ENST00000466379 PHF14O94880 888 aa16.15■□□□□ 0.18
UBE4B-206ENST00000466379 SLC5A1P13866 664 aa16.15■□□□□ 0.18
UBE4B-206ENST00000466379 SH2B1Q9NRF2 756 aaPredicted RBP16.15■□□□□ 0.18
UBE4B-206ENST00000466379 NARFQ9UHQ1 456 aa16.15■□□□□ 0.18
UBE4B-206ENST00000466379 LAMA4Q16363 1823 aa16.15■□□□□ 0.18
UBE4B-206ENST00000466379 RTL9Q8NET4 1388 aa16.15■□□□□ 0.18
UBE4B-206ENST00000466379 PTMSP20962 102 aa16.15■□□□□ 0.18
UBE4B-206ENST00000466379 GJB2P29033 226 aa16.15■□□□□ 0.18
UBE4B-206ENST00000466379 GTF2E1P29083 439 aaPredicted RBP16.15■□□□□ 0.18
UBE4B-206ENST00000466379 ARID4AP29374 1257 aaPredicted RBP16.15■□□□□ 0.18
UBE4B-206ENST00000466379 STK3Q13188 491 aa16.15■□□□□ 0.18
UBE4B-206ENST00000466379 LRRFIP1Q32MZ4 808 aaKnown RBP16.15■□□□□ 0.18
UBE4B-206ENST00000466379 ZNF512BQ96KM6 892 aaPredicted RBP16.15■□□□□ 0.18
UBE4B-206ENST00000466379 LMBRD1Q9NUN5 540 aa16.15■□□□□ 0.18
UBE4B-206ENST00000466379 TRPC5Q9UL62 973 aaPredicted RBP16.15■□□□□ 0.18
UBE4B-206ENST00000466379 FOXP2O15409 715 aa16.14■□□□□ 0.17
UBE4B-206ENST00000466379 PRPF40AO75400 957 aaKnown RBP16.14■□□□□ 0.17
UBE4B-206ENST00000466379 IDH1O75874 414 aaKnown RBP16.14■□□□□ 0.17
UBE4B-206ENST00000466379 ZFYP08048 801 aaPredicted RBP16.14■□□□□ 0.17
UBE4B-206ENST00000466379 HSP90B1P14625 803 aaKnown RBP16.14■□□□□ 0.17
UBE4B-206ENST00000466379 CHRNDQ07001 517 aa16.14■□□□□ 0.17
UBE4B-206ENST00000466379 TICAM2Q86XR7 235 aa16.14■□□□□ 0.17
UBE4B-206ENST00000466379 APPBP2Q92624 585 aa16.14■□□□□ 0.17
UBE4B-206ENST00000466379 RTCBQ9Y3I0 505 aaKnown RBP16.14■□□□□ 0.17
UBE4B-206ENST00000466379 DDX49Q9Y6V7 483 aaKnown RBP16.14■□□□□ 0.17
UBE4B-206ENST00000466379 LY75O60449 1722 aa16.14■□□□□ 0.17
UBE4B-206ENST00000466379 TAF1LQ8IZX4 1826 aa16.14■□□□□ 0.17
UBE4B-206ENST00000466379 ZPR1O75312 459 aa16.14■□□□□ 0.17
UBE4B-206ENST00000466379 SKOR2Q2VWA4 1001 aaPredicted RBP16.14■□□□□ 0.17
UBE4B-206ENST00000466379 Q6ZUG5 572 aa16.14■□□□□ 0.17
UBE4B-206ENST00000466379 WTIPA6NIX2 430 aaPredicted RBP16.13■□□□□ 0.17
UBE4B-206ENST00000466379 UQCRFS1P1P0C7P4 283 aa16.13■□□□□ 0.17
UBE4B-206ENST00000466379 ANKRD1Q15327 319 aa16.13■□□□□ 0.17
UBE4B-206ENST00000466379 SLC9C2Q5TAH2 1124 aa16.13■□□□□ 0.17
UBE4B-206ENST00000466379 ARHGEF1Q92888 912 aaKnown RBP16.13■□□□□ 0.17
UBE4B-206ENST00000466379 WWC3Q9ULE0 1092 aa16.13■□□□□ 0.17
UBE4B-206ENST00000466379 WDR33Q9C0J8 1336 aaKnown RBP16.12■□□□□ 0.17
UBE4B-206ENST00000466379 SYT1P21579 422 aa16.12■□□□□ 0.17
UBE4B-206ENST00000466379 ADD2P35612 726 aa16.12■□□□□ 0.17
UBE4B-206ENST00000466379 BCAMP50895 628 aa16.12■□□□□ 0.17
UBE4B-206ENST00000466379 HAND2P61296 217 aa16.12■□□□□ 0.17
UBE4B-206ENST00000466379 RASGRF1Q13972 1273 aa16.12■□□□□ 0.17
UBE4B-206ENST00000466379 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.12■□□□□ 0.179e-7■■■■□ 22.3
UBE4B-206ENST00000466379 ALDH8A1Q9H2A2 487 aaPredicted RBP16.12■□□□□ 0.17
UBE4B-206ENST00000466379 E7EWF7 191 aa16.12■□□□□ 0.17
UBE4B-206ENST00000466379 GPAA1O43292 621 aa16.12■□□□□ 0.17
UBE4B-206ENST00000466379 ONECUT3O60422 494 aaPredicted RBP16.12■□□□□ 0.17
UBE4B-206ENST00000466379 NCLP19338 710 aaKnown RBP16.12■□□□□ 0.17
UBE4B-206ENST00000466379 SPATA5Q8NB90 893 aa16.12■□□□□ 0.17
UBE4B-206ENST00000466379 SETDB2Q96T68 719 aa16.12■□□□□ 0.17
UBE4B-206ENST00000466379 CDC5LQ99459 802 aaKnown RBP16.12■□□□□ 0.17
UBE4B-206ENST00000466379 QTRT2Q9H974 415 aaKnown RBP16.12■□□□□ 0.17
UBE4B-206ENST00000466379 STX6O43752 255 aa16.11■□□□□ 0.17
UBE4B-206ENST00000466379 TTF1Q15361 905 aaPredicted RBP16.11■□□□□ 0.17
UBE4B-206ENST00000466379 NBPF5PQ86XG9 351 aaPredicted RBP16.11■□□□□ 0.17
UBE4B-206ENST00000466379 ANKRD18AQ8IVF6 992 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms