RNA–Protein interactions for RNA: ENST00000464787.1

UBP1-206, Transcript of upstream binding protein 1, humanhuman

TSL 3

Gene UBP1, Length 536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-206ENST00000464787 GYS1P13807 737 aa6.97□□□□□ -1.29
UBP1-206ENST00000464787 HMGB2P26583 209 aaKnown RBP6.97□□□□□ -1.29
UBP1-206ENST00000464787 POLD1P28340 1107 aa6.97□□□□□ -1.29
UBP1-206ENST00000464787 NR6A1Q15406 480 aa6.97□□□□□ -1.29
UBP1-206ENST00000464787 Q3C1V9 767 aa6.97□□□□□ -1.29
UBP1-206ENST00000464787 NLGN2Q8NFZ4 835 aa6.97□□□□□ -1.29
UBP1-206ENST00000464787 RUNDC1Q96C34 613 aa6.97□□□□□ -1.29
UBP1-206ENST00000464787 FMNL2Q96PY5 1086 aa6.97□□□□□ -1.29
UBP1-206ENST00000464787 PNNQ9H307 717 aaKnown RBP6.97□□□□□ -1.29
UBP1-206ENST00000464787 USP16Q9Y5T5 823 aa6.97□□□□□ -1.29
UBP1-206ENST00000464787 KDM3BQ7LBC6 1761 aa6.97□□□□□ -1.29
UBP1-206ENST00000464787 SOS1Q07889 1333 aaPredicted RBP6.97□□□□□ -1.29
UBP1-206ENST00000464787 NEFMP07197 916 aa6.96□□□□□ -1.3
UBP1-206ENST00000464787 CANXP27824 592 aaKnown RBP6.96□□□□□ -1.3
UBP1-206ENST00000464787 RFC4P35249 363 aa6.96□□□□□ -1.3
UBP1-206ENST00000464787 B4GALNT3Q6L9W6 998 aa6.96□□□□□ -1.3
UBP1-206ENST00000464787 EPS8L1Q8TE68 723 aa6.96□□□□□ -1.3
UBP1-206ENST00000464787 PNISRQ8TF01 805 aaKnown RBP6.96□□□□□ -1.3
UBP1-206ENST00000464787 VRTNQ9H8Y1 702 aa6.96□□□□□ -1.3
UBP1-206ENST00000464787 USP42Q9H9J4 1324 aaKnown RBP6.96□□□□□ -1.3
UBP1-206ENST00000464787 COL15A1P39059 1388 aa6.95□□□□□ -1.3
UBP1-206ENST00000464787 APAF1O14727 1248 aa6.95□□□□□ -1.3
UBP1-206ENST00000464787 ANP32CO43423 234 aa6.95□□□□□ -1.3
UBP1-206ENST00000464787 TLL1O43897 1013 aa6.95□□□□□ -1.3
UBP1-206ENST00000464787 STARD3NLO95772 234 aa6.95□□□□□ -1.3
UBP1-206ENST00000464787 MMP10P09238 476 aa6.95□□□□□ -1.3
UBP1-206ENST00000464787 RBM25P49756 843 aaKnown RBP6.95□□□□□ -1.3
UBP1-206ENST00000464787 EIF5P55010 431 aaKnown RBP6.95□□□□□ -1.3
UBP1-206ENST00000464787 EIF4A1P60842 406 aaKnown RBP6.95□□□□□ -1.3
UBP1-206ENST00000464787 USPL1Q5W0Q7 1092 aa6.95□□□□□ -1.3
UBP1-206ENST00000464787 RETREG3Q86VR2 466 aa6.95□□□□□ -1.3
UBP1-206ENST00000464787 SYMPKQ92797 1274 aaKnown RBP6.95□□□□□ -1.3
UBP1-206ENST00000464787 EMID1Q96A84 441 aaPredicted RBP6.95□□□□□ -1.3
UBP1-206ENST00000464787 PPEF1O14829 653 aaPredicted RBP6.94□□□□□ -1.3
UBP1-206ENST00000464787 ZPR1O75312 459 aa6.94□□□□□ -1.3
UBP1-206ENST00000464787 GIGYF1O75420 1035 aaPredicted RBP6.94□□□□□ -1.3
UBP1-206ENST00000464787 ATG7O95352 703 aa6.94□□□□□ -1.3
UBP1-206ENST00000464787 SNRPA1P09661 255 aaKnown RBP6.94□□□□□ -1.3
UBP1-206ENST00000464787 DDR1Q08345 913 aa6.94□□□□□ -1.3
UBP1-206ENST00000464787 KRT24Q2M2I5 525 aa6.94□□□□□ -1.3
UBP1-206ENST00000464787 FOXD4L5Q5VV16 416 aaPredicted RBP6.94□□□□□ -1.3
UBP1-206ENST00000464787 NBPF10Q6P3W6 841 aaKnown RBP6.94□□□□□ -1.3
UBP1-206ENST00000464787 BLOC1S3Q6QNY0 202 aa6.94□□□□□ -1.3
UBP1-206ENST00000464787 TRIM67Q6ZTA4 783 aa6.94□□□□□ -1.3
UBP1-206ENST00000464787 NBPF15Q8N660 670 aa6.94□□□□□ -1.3
UBP1-206ENST00000464787 FOXD4L4Q8WXT5 416 aaPredicted RBP6.94□□□□□ -1.3
UBP1-206ENST00000464787 ZNF775Q96BV0 537 aaPredicted RBP6.94□□□□□ -1.3
UBP1-206ENST00000464787 TEX13AQ9BXU3 409 aaPredicted RBP6.94□□□□□ -1.3
UBP1-206ENST00000464787 MRS2Q9HD23 443 aa6.94□□□□□ -1.3
UBP1-206ENST00000464787 TM4SF1P30408 202 aa6.93□□□□□ -1.3
UBP1-206ENST00000464787 NLGN1Q8N2Q7 840 aa6.93□□□□□ -1.3
UBP1-206ENST00000464787 NARFQ9UHQ1 456 aa6.93□□□□□ -1.3
UBP1-206ENST00000464787 TSPYL4Q9UJ04 414 aa6.93□□□□□ -1.3
UBP1-206ENST00000464787 WWC3Q9ULE0 1092 aa6.93□□□□□ -1.3
UBP1-206ENST00000464787 MAFBQ9Y5Q3 323 aaPredicted RBP6.93□□□□□ -1.3
UBP1-206ENST00000464787 KIAA1551Q9HCM1 1747 aa6.93□□□□□ -1.3
UBP1-206ENST00000464787 AFDNP55196 1824 aaKnown RBP6.92□□□□□ -1.3
UBP1-206ENST00000464787 KIF13BQ9NQT8 1826 aa6.92□□□□□ -1.3
UBP1-206ENST00000464787 RNF223E7ERA6 249 aa6.92□□□□□ -1.3
UBP1-206ENST00000464787 POLRMTO00411 1230 aaKnown RBP6.92□□□□□ -1.3
UBP1-206ENST00000464787 CHL1O00533 1208 aa6.92□□□□□ -1.3
UBP1-206ENST00000464787 ATP9BO43861 1147 aa6.92□□□□□ -1.3
UBP1-206ENST00000464787 CAMTA2O94983 1202 aa6.92□□□□□ -1.3
UBP1-206ENST00000464787 YBX3P16989 372 aaKnown RBP eCLIP6.92□□□□□ -1.3
UBP1-206ENST00000464787 GGCXP38435 758 aa6.92□□□□□ -1.3
UBP1-206ENST00000464787 IL6STP40189 918 aaPredicted RBP6.92□□□□□ -1.3
UBP1-206ENST00000464787 LMOD3Q0VAK6 560 aa6.92□□□□□ -1.3
UBP1-206ENST00000464787 NFIXQ14938 502 aa6.92□□□□□ -1.3
UBP1-206ENST00000464787 CCDC27Q2M243 656 aa6.92□□□□□ -1.3
UBP1-206ENST00000464787 TBC1D9BQ66K14 1250 aa6.92□□□□□ -1.3
UBP1-206ENST00000464787 PRR14Q9BWN1 585 aa6.92□□□□□ -1.3
UBP1-206ENST00000464787 LAS1LQ9Y4W2 734 aaKnown RBP6.92□□□□□ -1.3
UBP1-206ENST00000464787 PCDHB3Q9Y5E6 796 aa6.92□□□□□ -1.3
UBP1-206ENST00000464787 CD2APQ9Y5K6 639 aa6.92□□□□□ -1.3
UBP1-206ENST00000464787 IVNS1ABPQ9Y6Y0 642 aa6.92□□□□□ -1.3
UBP1-206ENST00000464787 LAMB4A4D0S4 1761 aa6.92□□□□□ -1.3
UBP1-206ENST00000464787 N4BP2Q86UW6 1770 aaPredicted RBP6.92□□□□□ -1.3
UBP1-206ENST00000464787 SCN7AQ01118 1682 aa6.91□□□□□ -1.3
UBP1-206ENST00000464787 CARNS1A5YM72 827 aa6.91□□□□□ -1.3
UBP1-206ENST00000464787 POTECB2RU33 542 aa6.91□□□□□ -1.3
UBP1-206ENST00000464787 ZNF853P0CG23 659 aa6.91□□□□□ -1.3
UBP1-206ENST00000464787 NR1H3Q13133 447 aa6.91□□□□□ -1.3
UBP1-206ENST00000464787 PROSER3Q2NL68 480 aa6.91□□□□□ -1.3
UBP1-206ENST00000464787 DESI1Q6ICB0 168 aa6.91□□□□□ -1.3
UBP1-206ENST00000464787 BICDL1Q6ZP65 573 aa6.91□□□□□ -1.3
UBP1-206ENST00000464787 TBC1D9Q6ZT07 1266 aa6.91□□□□□ -1.3
UBP1-206ENST00000464787 LRP10Q7Z4F1 713 aa6.91□□□□□ -1.3
UBP1-206ENST00000464787 UCN2Q96RP3 112 aa6.91□□□□□ -1.3
UBP1-206ENST00000464787 PARP3Q9Y6F1 533 aa6.91□□□□□ -1.3
UBP1-206ENST00000464787 C10orf71Q711Q0 1435 aa6.91□□□□□ -1.3
UBP1-206ENST00000464787 PXDNLA1KZ92 1463 aa6.91□□□□□ -1.3
UBP1-206ENST00000464787 NRXN2Q9P2S2 1712 aa6.9□□□□□ -1.3
UBP1-206ENST00000464787 BCORQ6W2J9 1755 aa6.9□□□□□ -1.3
UBP1-206ENST00000464787 A0A087WZG4 1122 aa6.9□□□□□ -1.3
UBP1-206ENST00000464787 A0A0G2JLW4 131 aa6.9□□□□□ -1.3
UBP1-206ENST00000464787 E9PSI1 815 aa6.9□□□□□ -1.3
UBP1-206ENST00000464787 GPR37L1O60883 481 aa6.9□□□□□ -1.3
UBP1-206ENST00000464787 ANXA1P04083 346 aa6.9□□□□□ -1.3
UBP1-206ENST00000464787 EIF2S2P20042 333 aaKnown RBP6.9□□□□□ -1.3
UBP1-206ENST00000464787 KCNA3P22001 575 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms