RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 ZNRF3Q9ULT6 936 aa7.87□□□□□ -1.15
SF3B1-206ENST00000462613 PA2G4Q9UQ80 394 aaKnown RBP7.87□□□□□ -1.15
SF3B1-206ENST00000462613 SCN9AQ15858 1988 aa7.86□□□□□ -1.15
SF3B1-206ENST00000462613 ECE2O60344 883 aa7.86□□□□□ -1.15
SF3B1-206ENST00000462613 RAB11FIP3O75154 756 aa7.86□□□□□ -1.15
SF3B1-206ENST00000462613 LMOD1P29536 600 aaPredicted RBP7.86□□□□□ -1.15
SF3B1-206ENST00000462613 ATP2B3Q16720 1220 aa7.86□□□□□ -1.15
SF3B1-206ENST00000462613 CIAPIN1Q6FI81 312 aa7.86□□□□□ -1.15
SF3B1-206ENST00000462613 C15orf52Q6ZUT6 534 aaKnown RBP7.86□□□□□ -1.15
SF3B1-206ENST00000462613 KIF1BPQ96EK5 621 aa7.86□□□□□ -1.15
SF3B1-206ENST00000462613 RWDD1Q9H446 243 aaPredicted RBP7.86□□□□□ -1.15
SF3B1-206ENST00000462613 DBNDD1Q9H9R9 158 aa7.86□□□□□ -1.15
SF3B1-206ENST00000462613 MYO3BQ8WXR4 1341 aa7.85□□□□□ -1.15
SF3B1-206ENST00000462613 IQCA1LA6NCM1 817 aa7.85□□□□□ -1.15
SF3B1-206ENST00000462613 GLTPD2A6NH11 291 aa7.85□□□□□ -1.15
SF3B1-206ENST00000462613 FZD9O00144 591 aa7.85□□□□□ -1.15
SF3B1-206ENST00000462613 HIBADHP31937 336 aaKnown RBP7.85□□□□□ -1.15
SF3B1-206ENST00000462613 DOK7Q18PE1 504 aa7.85□□□□□ -1.15
SF3B1-206ENST00000462613 ATG9AQ7Z3C6 839 aa7.85□□□□□ -1.15
SF3B1-206ENST00000462613 GPC2Q8N158 579 aa7.85□□□□□ -1.15
SF3B1-206ENST00000462613 CLASRPQ8N2M8 674 aaKnown RBP7.85□□□□□ -1.15
SF3B1-206ENST00000462613 FBXW7Q969H0 707 aa7.85□□□□□ -1.15
SF3B1-206ENST00000462613 NEUROD6Q96NK8 337 aa7.85□□□□□ -1.15
SF3B1-206ENST00000462613 GPBP1L1Q9HC44 474 aaPredicted RBP7.85□□□□□ -1.15
SF3B1-206ENST00000462613 EXOC6BQ9Y2D4 811 aa7.85□□□□□ -1.15
SF3B1-206ENST00000462613 NOP58Q9Y2X3 529 aaKnown RBP7.85□□□□□ -1.15
SF3B1-206ENST00000462613 GJA3Q9Y6H8 435 aa7.85□□□□□ -1.15
SF3B1-206ENST00000462613 WDR90Q96KV7 1748 aa7.84□□□□□ -1.15
SF3B1-206ENST00000462613 AK9Q5TCS8 1911 aa7.84□□□□□ -1.15
SF3B1-206ENST00000462613 A0A1B0GUL7 405 aa7.84□□□□□ -1.15
SF3B1-206ENST00000462613 APBB1O00213 710 aa7.84□□□□□ -1.15
SF3B1-206ENST00000462613 IRX6P78412 446 aaPredicted RBP7.84□□□□□ -1.15
SF3B1-206ENST00000462613 TFCP2Q12800 502 aa7.84□□□□□ -1.15
SF3B1-206ENST00000462613 CCDC158Q5M9N0 1113 aa7.84□□□□□ -1.15
SF3B1-206ENST00000462613 C16orf71Q8IYS4 520 aaPredicted RBP7.84□□□□□ -1.15
SF3B1-206ENST00000462613 VGLL2Q8N8G2 317 aa7.84□□□□□ -1.15
SF3B1-206ENST00000462613 EXOC6Q8TAG9 804 aa7.84□□□□□ -1.15
SF3B1-206ENST00000462613 GCC1Q96CN9 775 aa7.84□□□□□ -1.15
SF3B1-206ENST00000462613 GPATCH3Q96I76 525 aa7.84□□□□□ -1.15
SF3B1-206ENST00000462613 GPR101Q96P66 508 aaPredicted RBP7.84□□□□□ -1.15
SF3B1-206ENST00000462613 LRRCC1Q9C099 1032 aa7.84□□□□□ -1.15
SF3B1-206ENST00000462613 CD209Q9NNX6 404 aa7.84□□□□□ -1.15
SF3B1-206ENST00000462613 GPR108Q9NPR9 543 aa7.84□□□□□ -1.15
SF3B1-206ENST00000462613 ECM29Q5VYK3 1845 aa7.84□□□□□ -1.15
SF3B1-206ENST00000462613 ZNF609O15014 1411 aa7.84□□□□□ -1.15
SF3B1-206ENST00000462613 MYH7P12883 1935 aa7.84□□□□□ -1.16
SF3B1-206ENST00000462613 USP17L3A6NCW0 530 aa7.83□□□□□ -1.16
SF3B1-206ENST00000462613 USP17L4A6NCW7 530 aa7.83□□□□□ -1.16
SF3B1-206ENST00000462613 SEMA3EO15041 775 aa7.83□□□□□ -1.16
SF3B1-206ENST00000462613 RAD17O75943 681 aa7.83□□□□□ -1.16
SF3B1-206ENST00000462613 IFIT2P09913 472 aaKnown RBP7.83□□□□□ -1.16
SF3B1-206ENST00000462613 RPS12P25398 132 aaKnown RBP7.83□□□□□ -1.16
SF3B1-206ENST00000462613 GYG1P46976 350 aa7.83□□□□□ -1.16
SF3B1-206ENST00000462613 MMP14P50281 582 aa7.83□□□□□ -1.16
SF3B1-206ENST00000462613 CXCL9Q07325 125 aa7.83□□□□□ -1.16
SF3B1-206ENST00000462613 TTLL5Q6EMB2 1281 aa7.83□□□□□ -1.16
SF3B1-206ENST00000462613 USP17L1Q7RTZ2 530 aa7.83□□□□□ -1.16
SF3B1-206ENST00000462613 OGFOD1Q8N543 542 aa7.83□□□□□ -1.16
SF3B1-206ENST00000462613 ZGPATQ8N5A5 531 aaKnown RBP7.83□□□□□ -1.16
SF3B1-206ENST00000462613 RHPN1Q8TCX5 695 aa7.83□□□□□ -1.16
SF3B1-206ENST00000462613 ZNF526Q8TF50 670 aaPredicted RBP7.83□□□□□ -1.16
SF3B1-206ENST00000462613 TBC1D22AQ8WUA7 517 aa7.83□□□□□ -1.16
SF3B1-206ENST00000462613 BCL11AQ9H165 835 aa7.83□□□□□ -1.16
SF3B1-206ENST00000462613 HDAC9Q9UKV0 1011 aa7.83□□□□□ -1.16
SF3B1-206ENST00000462613 GOLGB1Q14789 3259 aaKnown RBP7.83□□□□□ -1.16
SF3B1-206ENST00000462613 MYH2Q9UKX2 1941 aa7.83□□□□□ -1.16
SF3B1-206ENST00000462613 H7C1D1 291 aa7.82□□□□□ -1.16
SF3B1-206ENST00000462613 DDNO94850 711 aaPredicted RBP7.82□□□□□ -1.16
SF3B1-206ENST00000462613 SASH1O94885 1247 aa7.82□□□□□ -1.16
SF3B1-206ENST00000462613 UQCRFS1P1P0C7P4 283 aa7.82□□□□□ -1.16
SF3B1-206ENST00000462613 IL1R1P14778 569 aa7.82□□□□□ -1.16
SF3B1-206ENST00000462613 VEGFAP15692 232 aaPredicted RBP7.82□□□□□ -1.16
SF3B1-206ENST00000462613 FGFR2P21802 821 aa7.82□□□□□ -1.16
SF3B1-206ENST00000462613 PRELPP51888 382 aa7.82□□□□□ -1.16
SF3B1-206ENST00000462613 TIMM10P62072 90 aa7.82□□□□□ -1.16
SF3B1-206ENST00000462613 GTF2IP78347 998 aa7.82□□□□□ -1.16
SF3B1-206ENST00000462613 HDAC1Q13547 482 aaPredicted RBP7.82□□□□□ -1.16
SF3B1-206ENST00000462613 TNNI3KQ59H18 835 aa7.82□□□□□ -1.16
SF3B1-206ENST00000462613 TTC39AQ5SRH9 613 aa7.82□□□□□ -1.16
SF3B1-206ENST00000462613 STRIP1Q5VSL9 837 aa7.82□□□□□ -1.16
SF3B1-206ENST00000462613 SLC51AQ86UW1 340 aa7.82□□□□□ -1.16
SF3B1-206ENST00000462613 AACSQ86V21 672 aa7.82□□□□□ -1.16
SF3B1-206ENST00000462613 AGBL3Q8NEM8 1001 aa7.82□□□□□ -1.16
SF3B1-206ENST00000462613 WDR66Q8TBY9 1149 aa7.82□□□□□ -1.16
SF3B1-206ENST00000462613 XAGE2Q96GT9 111 aa7.82□□□□□ -1.16
SF3B1-206ENST00000462613 DCTPP1Q9H773 170 aa7.82□□□□□ -1.16
SF3B1-206ENST00000462613 DENND2AQ9ULE3 1009 aa7.82□□□□□ -1.16
SF3B1-206ENST00000462613 FPGT-TNNI3KV9GXZ4 949 aa7.82□□□□□ -1.16
SF3B1-206ENST00000462613 POLR2AP24928 1970 aaKnown RBP7.82□□□□□ -1.16
SF3B1-206ENST00000462613 ZNF646O15015 1829 aaPredicted RBP7.82□□□□□ -1.16
SF3B1-206ENST00000462613 AKAP11Q9UKA4 1901 aa7.82□□□□□ -1.16
SF3B1-206ENST00000462613 MAST3O60307 1309 aa7.81□□□□□ -1.16
SF3B1-206ENST00000462613 ZNF541Q9H0D2 1346 aa7.81□□□□□ -1.16
SF3B1-206ENST00000462613 YDJCA8MPS7 323 aa7.81□□□□□ -1.16
SF3B1-206ENST00000462613 SNAP23O00161 211 aa7.81□□□□□ -1.16
SF3B1-206ENST00000462613 PSMD14O00487 310 aa7.81□□□□□ -1.16
SF3B1-206ENST00000462613 KLRK1P26718 216 aa7.81□□□□□ -1.16
SF3B1-206ENST00000462613 BCAMP50895 628 aa7.81□□□□□ -1.16
SF3B1-206ENST00000462613 FKBP1AP62942 108 aaKnown RBP7.81□□□□□ -1.16
SF3B1-206ENST00000462613 CHAF1AQ13111 956 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms