RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 MED23Q9ULK4 1368 aa11.86□□□□□ -0.51
PKP4-208ENST00000462335 CIAO1O76071 339 aa11.85□□□□□ -0.51
PKP4-208ENST00000462335 PDE8BO95263 885 aa11.85□□□□□ -0.51
PKP4-208ENST00000462335 HIBADHP31937 336 aaKnown RBP11.85□□□□□ -0.51
PKP4-208ENST00000462335 EPHX2P34913 555 aa11.85□□□□□ -0.51
PKP4-208ENST00000462335 GMPSP49915 693 aaPredicted RBP11.85□□□□□ -0.51
PKP4-208ENST00000462335 ATP8B2P98198 1209 aa11.85□□□□□ -0.51
PKP4-208ENST00000462335 PTPN12Q05209 780 aaKnown RBP11.85□□□□□ -0.51
PKP4-208ENST00000462335 PUM3Q15397 648 aaKnown RBP11.85□□□□□ -0.51
PKP4-208ENST00000462335 TTLL5Q6EMB2 1281 aa11.85□□□□□ -0.51
PKP4-208ENST00000462335 SMC1BQ8NDV3 1235 aa11.85□□□□□ -0.51
PKP4-208ENST00000462335 GNL3LQ9NVN8 582 aaKnown RBP11.85□□□□□ -0.51
PKP4-208ENST00000462335 CNOT7Q9UIV1 285 aaKnown RBP11.85□□□□□ -0.51
PKP4-208ENST00000462335 AKAP2Q9Y2D5 859 aa11.85□□□□□ -0.51
PKP4-208ENST00000462335 PSMD14O00487 310 aa11.84□□□□□ -0.51
PKP4-208ENST00000462335 SURF6O75683 361 aaKnown RBP11.84□□□□□ -0.51
PKP4-208ENST00000462335 RPS12P25398 132 aaKnown RBP11.84□□□□□ -0.51
PKP4-208ENST00000462335 L3MBTL3Q96JM7 780 aaPredicted RBP11.84□□□□□ -0.51
PKP4-208ENST00000462335 NEUROD6Q96NK8 337 aa11.84□□□□□ -0.51
PKP4-208ENST00000462335 BCL11AQ9H165 835 aa11.84□□□□□ -0.51
PKP4-208ENST00000462335 COPRSQ9NQ92 184 aa11.84□□□□□ -0.51
PKP4-208ENST00000462335 HDAC9Q9UKV0 1011 aa11.84□□□□□ -0.51
PKP4-208ENST00000462335 PA2G4Q9UQ80 394 aaKnown RBP11.84□□□□□ -0.51
PKP4-208ENST00000462335 LRRC37AA6NMS7 1700 aa11.83□□□□□ -0.52
PKP4-208ENST00000462335 YDJCA8MPS7 323 aa11.83□□□□□ -0.52
PKP4-208ENST00000462335 KIF3CO14782 793 aa11.83□□□□□ -0.52
PKP4-208ENST00000462335 C1QTNF8P60827 252 aa11.83□□□□□ -0.52
PKP4-208ENST00000462335 GTF2IP78347 998 aa11.83□□□□□ -0.52
PKP4-208ENST00000462335 ATP2B3Q16720 1220 aa11.83□□□□□ -0.52
PKP4-208ENST00000462335 HSP90AB4PQ58FF6 505 aa11.83□□□□□ -0.52
PKP4-208ENST00000462335 RBM26Q5T8P6 1007 aaKnown RBP11.83□□□□□ -0.52
PKP4-208ENST00000462335 RBM46Q8TBY0 533 aaKnown RBP11.83□□□□□ -0.52
PKP4-208ENST00000462335 LPIN2Q92539 896 aa11.83□□□□□ -0.52
PKP4-208ENST00000462335 TAF1DQ9H5J8 278 aaPredicted RBP11.83□□□□□ -0.52
PKP4-208ENST00000462335 CD209Q9NNX6 404 aa11.83□□□□□ -0.52
PKP4-208ENST00000462335 ADARB2Q9NS39 739 aaKnown RBP11.83□□□□□ -0.52
PKP4-208ENST00000462335 GPRC5DQ9NZD1 345 aa11.83□□□□□ -0.52
PKP4-208ENST00000462335 ZBTB12Q9Y330 459 aaPredicted RBP11.83□□□□□ -0.52
PKP4-208ENST00000462335 SNED1Q8TER0 1413 aa11.83□□□□□ -0.52
PKP4-208ENST00000462335 WTIPA6NIX2 430 aaPredicted RBP11.82□□□□□ -0.52
PKP4-208ENST00000462335 SNAP23O00161 211 aa11.82□□□□□ -0.52
PKP4-208ENST00000462335 GYG1P46976 350 aa11.82□□□□□ -0.52
PKP4-208ENST00000462335 RFX5P48382 616 aaPredicted RBP11.82□□□□□ -0.52
PKP4-208ENST00000462335 RRP1P56182 461 aaKnown RBP11.82□□□□□ -0.52
PKP4-208ENST00000462335 FSTL1Q12841 308 aa11.82□□□□□ -0.52
PKP4-208ENST00000462335 MTX1Q13505 466 aa11.82□□□□□ -0.52
PKP4-208ENST00000462335 STRIP1Q5VSL9 837 aa11.82□□□□□ -0.52
PKP4-208ENST00000462335 RSBN1LQ6PCB5 846 aaPredicted RBP11.82□□□□□ -0.52
PKP4-208ENST00000462335 USP50Q70EL3 339 aaPredicted RBP11.82□□□□□ -0.52
PKP4-208ENST00000462335 LDHDQ86WU2 507 aa11.82□□□□□ -0.52
PKP4-208ENST00000462335 RPAP2Q8IXW5 612 aaPredicted RBP11.82□□□□□ -0.52
PKP4-208ENST00000462335 MICALL2Q8IY33 904 aa11.82□□□□□ -0.52
PKP4-208ENST00000462335 AGBL3Q8NEM8 1001 aa11.82□□□□□ -0.52
PKP4-208ENST00000462335 DPF2Q92785 391 aa11.82□□□□□ -0.52
PKP4-208ENST00000462335 KCNQ5Q9NR82 932 aa11.82□□□□□ -0.52
PKP4-208ENST00000462335 ZBTB47Q9UFB7 747 aaPredicted RBP11.82□□□□□ -0.52
PKP4-208ENST00000462335 MYO3BQ8WXR4 1341 aa11.82□□□□□ -0.52
PKP4-208ENST00000462335 PNMA6EA0A0J9YXQ4 647 aa11.81□□□□□ -0.52
PKP4-208ENST00000462335 VIL1P09327 827 aaKnown RBP11.81□□□□□ -0.52
PKP4-208ENST00000462335 USP17L8P0C7I0 530 aa11.81□□□□□ -0.52
PKP4-208ENST00000462335 EPS15P42566 896 aa11.81□□□□□ -0.52
PKP4-208ENST00000462335 CHAF1AQ13111 956 aaPredicted RBP11.81□□□□□ -0.52
PKP4-208ENST00000462335 CHADLQ6NUI6 762 aa11.81□□□□□ -0.52
PKP4-208ENST00000462335 C15orf52Q6ZUT6 534 aaKnown RBP11.81□□□□□ -0.52
PKP4-208ENST00000462335 TXNRD3Q86VQ6 643 aa11.81□□□□□ -0.52
PKP4-208ENST00000462335 ERC1Q8IUD2 1116 aa11.81□□□□□ -0.52
PKP4-208ENST00000462335 KLRK1P26718 216 aa11.8□□□□□ -0.52
PKP4-208ENST00000462335 RBM5P52756 815 aaKnown RBP eCLIP11.8□□□□□ -0.52
PKP4-208ENST00000462335 TFCP2Q12800 502 aa11.8□□□□□ -0.52
PKP4-208ENST00000462335 C20orf194Q5TEA3 1177 aa11.8□□□□□ -0.52
PKP4-208ENST00000462335 SCN4AP35499 1836 aa11.8□□□□□ -0.52
PKP4-208ENST00000462335 COL4A1P02462 1669 aa11.8□□□□□ -0.52
PKP4-208ENST00000462335 F8W031 263 aaPredicted RBP11.79□□□□□ -0.52
PKP4-208ENST00000462335 APBB1O00213 710 aa11.79□□□□□ -0.52
PKP4-208ENST00000462335 SASH1O94885 1247 aa11.79□□□□□ -0.52
PKP4-208ENST00000462335 MMP14P50281 582 aa11.79□□□□□ -0.52
PKP4-208ENST00000462335 BCAMP50895 628 aa11.79□□□□□ -0.52
PKP4-208ENST00000462335 SCNN1DP51172 638 aa11.79□□□□□ -0.52
PKP4-208ENST00000462335 TBC1D10BQ4KMP7 808 aaPredicted RBP11.79□□□□□ -0.52
PKP4-208ENST00000462335 CEP85Q6P2H3 762 aa11.79□□□□□ -0.52
PKP4-208ENST00000462335 ATG9AQ7Z3C6 839 aa11.79□□□□□ -0.52
PKP4-208ENST00000462335 SSH3Q8TE77 659 aa11.79□□□□□ -0.52
PKP4-208ENST00000462335 TBC1D22AQ8WUA7 517 aa11.79□□□□□ -0.52
PKP4-208ENST00000462335 DCPSQ96C86 337 aaKnown RBP11.79□□□□□ -0.52
PKP4-208ENST00000462335 FAM84BQ96KN1 310 aaPredicted RBP11.79□□□□□ -0.52
PKP4-208ENST00000462335 ZBTB40Q9NUA8 1239 aa11.79□□□□□ -0.52
PKP4-208ENST00000462335 IQSEC3Q9UPP2 1182 aaPredicted RBP11.79□□□□□ -0.52
PKP4-208ENST00000462335 WDR90Q96KV7 1748 aa11.79□□□□□ -0.52
PKP4-208ENST00000462335 DUOX1Q9NRD9 1551 aa11.79□□□□□ -0.52
PKP4-208ENST00000462335 POTECB2RU33 542 aa11.78□□□□□ -0.52
PKP4-208ENST00000462335 MYO1BO43795 1136 aa11.78□□□□□ -0.52
PKP4-208ENST00000462335 IL1R1P14778 569 aa11.78□□□□□ -0.52
PKP4-208ENST00000462335 TIMM10P62072 90 aa11.78□□□□□ -0.52
PKP4-208ENST00000462335 CCDC158Q5M9N0 1113 aa11.78□□□□□ -0.52
PKP4-208ENST00000462335 KIAA0825Q8IV33 1275 aa11.78□□□□□ -0.52
PKP4-208ENST00000462335 JAG2Q9Y219 1238 aa11.78□□□□□ -0.52
PKP4-208ENST00000462335 SUPT16HQ9Y5B9 1047 aaKnown RBP11.78□□□□□ -0.52
PKP4-208ENST00000462335 COL4A5P29400 1685 aa11.78□□□□□ -0.52
PKP4-208ENST00000462335 A0A1B0GUL7 405 aa11.77□□□□□ -0.53
PKP4-208ENST00000462335 POLA2Q14181 598 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms