RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 CNTROBQ8N137 903 aa28.23■■■□□ 2.11
TRAF4-207ENST00000461195 FRAT1Q92837 279 aaPredicted RBP28.23■■■□□ 2.11
TRAF4-207ENST00000461195 PASKQ96RG2 1323 aa28.22■■■□□ 2.11
TRAF4-207ENST00000461195 KLRK1P26718 216 aa28.22■■■□□ 2.11
TRAF4-207ENST00000461195 INTS3Q68E01 1043 aaKnown RBP28.22■■■□□ 2.11
TRAF4-207ENST00000461195 SHTN1A0MZ66 631 aa28.21■■■□□ 2.11
TRAF4-207ENST00000461195 USP17L3A6NCW0 530 aa28.21■■■□□ 2.11
TRAF4-207ENST00000461195 USP17L4A6NCW7 530 aa28.21■■■□□ 2.11
TRAF4-207ENST00000461195 RSBN1LQ6PCB5 846 aaPredicted RBP28.21■■■□□ 2.11
TRAF4-207ENST00000461195 ATF7IPQ6VMQ6 1270 aa28.21■■■□□ 2.11
TRAF4-207ENST00000461195 USP17L1Q7RTZ2 530 aa28.21■■■□□ 2.11
TRAF4-207ENST00000461195 HDAC5Q9UQL6 1122 aa28.21■■■□□ 2.11
TRAF4-207ENST00000461195 ZNF609O15014 1411 aa28.2■■■□□ 2.11
TRAF4-207ENST00000461195 SNAP23O00161 211 aa28.2■■■□□ 2.1
TRAF4-207ENST00000461195 PLIN1O60240 522 aa28.2■■■□□ 2.1
TRAF4-207ENST00000461195 TRIM27P14373 513 aa28.2■■■□□ 2.1
TRAF4-207ENST00000461195 PUS3Q9BZE2 481 aaKnown RBP28.2■■■□□ 2.1
TRAF4-207ENST00000461195 C15orf52Q6ZUT6 534 aaKnown RBP28.19■■■□□ 2.1
TRAF4-207ENST00000461195 AGBL3Q8NEM8 1001 aa28.19■■■□□ 2.1
TRAF4-207ENST00000461195 TRPM4Q8TD43 1214 aa28.19■■■□□ 2.1
TRAF4-207ENST00000461195 RIPOR2Q9Y4F9 1068 aa28.18■■■□□ 2.1
TRAF4-207ENST00000461195 MROH5Q6ZUA9 1318 aa28.18■■■□□ 2.1
TRAF4-207ENST00000461195 IRS2Q9Y4H2 1338 aa28.18■■■□□ 2.1
TRAF4-207ENST00000461195 HIRAP54198 1017 aaPredicted RBP28.17■■■□□ 2.1
TRAF4-207ENST00000461195 SAMD7Q7Z3H4 446 aa28.17■■■□□ 2.1
TRAF4-207ENST00000461195 ZC3H15Q8WU90 426 aaKnown RBP28.17■■■□□ 2.1
TRAF4-207ENST00000461195 CREBZFQ9NS37 354 aa28.17■■■□□ 2.1
TRAF4-207ENST00000461195 ZNF646O15015 1829 aaPredicted RBP28.16■■■□□ 2.1
TRAF4-207ENST00000461195 ZKSCAN2Q63HK3 967 aa28.16■■■□□ 2.1
TRAF4-207ENST00000461195 MEIS3Q99687 375 aa28.16■■■□□ 2.1
TRAF4-207ENST00000461195 MKRN1Q9UHC7 482 aaKnown RBP28.16■■■□□ 2.1
TRAF4-207ENST00000461195 PGAP2Q9UHJ9 254 aa28.16■■■□□ 2.1
TRAF4-207ENST00000461195 TBC1D10BQ4KMP7 808 aaPredicted RBP28.15■■■□□ 2.1
TRAF4-207ENST00000461195 STRIP1Q5VSL9 837 aa28.15■■■□□ 2.1
TRAF4-207ENST00000461195 FBXW7Q969H0 707 aa28.15■■■□□ 2.1
TRAF4-207ENST00000461195 GMLQ99445 158 aa28.15■■■□□ 2.1
TRAF4-207ENST00000461195 CD209Q9NNX6 404 aa28.15■■■□□ 2.1
TRAF4-207ENST00000461195 TNNQ9UQP3 1299 aa28.15■■■□□ 2.1
TRAF4-207ENST00000461195 GNAI3P08754 354 aa28.14■■■□□ 2.1
TRAF4-207ENST00000461195 UBE4AQ14139 1066 aa28.14■■■□□ 2.1
TRAF4-207ENST00000461195 LRRC24Q50LG9 513 aa28.14■■■□□ 2.1
TRAF4-207ENST00000461195 DACT2Q5SW24 774 aa28.14■■■□□ 2.1
TRAF4-207ENST00000461195 ZNF804AQ7Z570 1209 aa28.14■■■□□ 2.1
TRAF4-207ENST00000461195 KLHDC4Q8TBB5 520 aa28.14■■■□□ 2.1
TRAF4-207ENST00000461195 CLUAP1Q96AJ1 413 aa28.14■■■□□ 2.1
TRAF4-207ENST00000461195 LRRFIP2Q9Y608 721 aaKnown RBP28.14■■■□□ 2.1
TRAF4-207ENST00000461195 RFX5P48382 616 aaPredicted RBP28.13■■■□□ 2.09
TRAF4-207ENST00000461195 METTL24Q5JXM2 366 aa28.13■■■□□ 2.09
TRAF4-207ENST00000461195 TMEM88BA6NKF7 163 aa28.12■■■□□ 2.09
TRAF4-207ENST00000461195 EGFRP00533 1210 aa28.12■■■□□ 2.09
TRAF4-207ENST00000461195 USP17L8P0C7I0 530 aa28.12■■■□□ 2.09
TRAF4-207ENST00000461195 ZNF280AP59817 542 aaPredicted RBP28.12■■■□□ 2.09
TRAF4-207ENST00000461195 RBM26Q5T8P6 1007 aaKnown RBP28.12■■■□□ 2.09
TRAF4-207ENST00000461195 TTLL5Q6EMB2 1281 aa28.12■■■□□ 2.09
TRAF4-207ENST00000461195 MYO3BQ8WXR4 1341 aa28.12■■■□□ 2.09
TRAF4-207ENST00000461195 KIF4BQ2VIQ3 1234 aa28.11■■■□□ 2.09
TRAF4-207ENST00000461195 TRPM7Q96QT4 1865 aa28.1■■■□□ 2.09
TRAF4-207ENST00000461195 IL1R1P14778 569 aa28.1■■■□□ 2.09
TRAF4-207ENST00000461195 GTF2IP78347 998 aa28.1■■■□□ 2.09
TRAF4-207ENST00000461195 PTPN12Q05209 780 aaKnown RBP28.1■■■□□ 2.09
TRAF4-207ENST00000461195 MXD3Q9BW11 206 aa28.1■■■□□ 2.09
TRAF4-207ENST00000461195 EYA2O00167 538 aa28.08■■■□□ 2.09
TRAF4-207ENST00000461195 TRAF5O00463 557 aa28.08■■■□□ 2.09
TRAF4-207ENST00000461195 PDE8BO95263 885 aa28.08■■■□□ 2.09
TRAF4-207ENST00000461195 CDC37L1Q7L3B6 337 aa28.08■■■□□ 2.09
TRAF4-207ENST00000461195 TMEM57Q8N5G2 664 aa28.08■■■□□ 2.09
TRAF4-207ENST00000461195 VGLL2Q8N8G2 317 aa28.08■■■□□ 2.09
TRAF4-207ENST00000461195 GLIS2Q9BZE0 524 aaPredicted RBP28.08■■■□□ 2.09
TRAF4-207ENST00000461195 FMR1Q06787 632 aaKnown RBP eCLIP28.07■■■□□ 2.08
TRAF4-207ENST00000461195 OGFOD1Q8N543 542 aa28.07■■■□□ 2.08
TRAF4-207ENST00000461195 MYOZ2Q9NPC6 264 aa28.07■■■□□ 2.08
TRAF4-207ENST00000461195 FTSJ3Q8IY81 847 aaKnown RBP28.06■■■□□ 2.08
TRAF4-207ENST00000461195 FBXO3Q9UK99 471 aa28.06■■■□□ 2.08
TRAF4-207ENST00000461195 POLR2AP24928 1970 aaKnown RBP28.06■■■□□ 2.08
TRAF4-207ENST00000461195 HIBADHP31937 336 aaKnown RBP28.05■■■□□ 2.08
TRAF4-207ENST00000461195 GYG1P46976 350 aa28.05■■■□□ 2.08
TRAF4-207ENST00000461195 MMP14P50281 582 aa28.05■■■□□ 2.08
TRAF4-207ENST00000461195 CNTNAP1P78357 1384 aa28.05■■■□□ 2.08
TRAF4-207ENST00000461195 DCPSQ96C86 337 aaKnown RBP28.05■■■□□ 2.08
TRAF4-207ENST00000461195 FAM84BQ96KN1 310 aaPredicted RBP28.05■■■□□ 2.08
TRAF4-207ENST00000461195 CIAO1O76071 339 aa28.04■■■□□ 2.08
TRAF4-207ENST00000461195 GNAI2P04899 355 aa28.04■■■□□ 2.08
TRAF4-207ENST00000461195 DZIP1LQ8IYY4 767 aaKnown RBP28.04■■■□□ 2.08
TRAF4-207ENST00000461195 PUM3Q15397 648 aaKnown RBP28.03■■■□□ 2.08
TRAF4-207ENST00000461195 ATG9AQ7Z3C6 839 aa28.03■■■□□ 2.08
TRAF4-207ENST00000461195 USP48Q86UV5 1035 aa28.03■■■□□ 2.08
TRAF4-207ENST00000461195 TDRD7Q8NHU6 1098 aaKnown RBP28.03■■■□□ 2.08
TRAF4-207ENST00000461195 SIL1Q9H173 461 aa28.03■■■□□ 2.08
TRAF4-207ENST00000461195 SASH1O94885 1247 aa28.02■■■□□ 2.08
TRAF4-207ENST00000461195 MTX1Q13505 466 aa28.02■■■□□ 2.08
TRAF4-207ENST00000461195 SCARF1Q14162 830 aa28.02■■■□□ 2.08
TRAF4-207ENST00000461195 CST9Q5W186 159 aa28.02■■■□□ 2.08
TRAF4-207ENST00000461195 KRT26Q7Z3Y9 468 aa28.02■■■□□ 2.08
TRAF4-207ENST00000461195 VPS37DQ86XT2 251 aa28.02■■■□□ 2.08
TRAF4-207ENST00000461195 KIAA0825Q8IV33 1275 aa28.02■■■□□ 2.08
TRAF4-207ENST00000461195 COPRSQ9NQ92 184 aa28.02■■■□□ 2.08
TRAF4-207ENST00000461195 GGA3Q9NZ52 723 aa28.02■■■□□ 2.08
TRAF4-207ENST00000461195 HDAC9Q9UKV0 1011 aa28.02■■■□□ 2.08
TRAF4-207ENST00000461195 SRGAP3O43295 1099 aa28.01■■■□□ 2.07
TRAF4-207ENST00000461195 FKBP1AP62942 108 aaKnown RBP28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms