RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 TRPM1Q7Z4N2 1603 aa6.92□□□□□ -1.3
SF3A3-202ENST00000460925 OPLAHO14841 1288 aa6.92□□□□□ -1.3
SF3A3-202ENST00000460925 TATP17735 454 aaPredicted RBP6.92□□□□□ -1.3
SF3A3-202ENST00000460925 CTSOP43234 321 aaPredicted RBP6.92□□□□□ -1.3
SF3A3-202ENST00000460925 DAB2P98082 770 aa6.92□□□□□ -1.3
SF3A3-202ENST00000460925 ATP2B2Q01814 1243 aa6.92□□□□□ -1.3
SF3A3-202ENST00000460925 LDLRAD1Q5T700 205 aa6.92□□□□□ -1.3
SF3A3-202ENST00000460925 ALG1LQ6GMV1 187 aa6.92□□□□□ -1.3
SF3A3-202ENST00000460925 NBPF10Q6P3W6 841 aaKnown RBP6.92□□□□□ -1.3
SF3A3-202ENST00000460925 RNF217Q8TC41 542 aa6.92□□□□□ -1.3
SF3A3-202ENST00000460925 FBF1Q8TES7 1133 aa6.92□□□□□ -1.3
SF3A3-202ENST00000460925 PIK3R5Q8WYR1 880 aa6.92□□□□□ -1.3
SF3A3-202ENST00000460925 SUSD3Q96L08 255 aa6.92□□□□□ -1.3
SF3A3-202ENST00000460925 POLMQ9NP87 494 aaPredicted RBP6.92□□□□□ -1.3
SF3A3-202ENST00000460925 SLC52A1Q9NWF4 448 aa6.92□□□□□ -1.3
SF3A3-202ENST00000460925 ANKIB1Q9P2G1 1089 aa6.92□□□□□ -1.3
SF3A3-202ENST00000460925 PARP2Q9UGN5 583 aa6.92□□□□□ -1.3
SF3A3-202ENST00000460925 SLIT1O75093 1534 aa6.91□□□□□ -1.3
SF3A3-202ENST00000460925 ASXL1Q8IXJ9 1541 aa6.91□□□□□ -1.3
SF3A3-202ENST00000460925 IGSF3O75054 1194 aa6.91□□□□□ -1.3
SF3A3-202ENST00000460925 NEFLP07196 543 aa6.91□□□□□ -1.3
SF3A3-202ENST00000460925 ATP4AP20648 1035 aa6.91□□□□□ -1.3
SF3A3-202ENST00000460925 XPCQ01831 940 aaPredicted RBP6.91□□□□□ -1.3
SF3A3-202ENST00000460925 NBPF8Q3BBV2 869 aa6.91□□□□□ -1.3
SF3A3-202ENST00000460925 XKR5Q6UX68 686 aa6.91□□□□□ -1.3
SF3A3-202ENST00000460925 GPR152Q8TDT2 470 aa6.91□□□□□ -1.3
SF3A3-202ENST00000460925 DCAF11Q8TEB1 546 aa6.91□□□□□ -1.3
SF3A3-202ENST00000460925 NUDT16Q96DE0 195 aaKnown RBP6.91□□□□□ -1.3
SF3A3-202ENST00000460925 C8orf37Q96NL8 207 aa6.91□□□□□ -1.3
SF3A3-202ENST00000460925 DUSP9Q99956 384 aaKnown RBP6.91□□□□□ -1.3
SF3A3-202ENST00000460925 BACH2Q9BYV9 841 aa6.91□□□□□ -1.3
SF3A3-202ENST00000460925 DNAJC25Q9H1X3 360 aa6.91□□□□□ -1.3
SF3A3-202ENST00000460925 ADGRF5Q8IZF2 1346 aa6.91□□□□□ -1.3
SF3A3-202ENST00000460925 ARHGAP23Q9P227 1491 aa6.91□□□□□ -1.3
SF3A3-202ENST00000460925 RGS20O76081 388 aa6.9□□□□□ -1.3
SF3A3-202ENST00000460925 AVPP01185 164 aa6.9□□□□□ -1.3
SF3A3-202ENST00000460925 LTKP29376 864 aa6.9□□□□□ -1.3
SF3A3-202ENST00000460925 INPP5BP32019 993 aa6.9□□□□□ -1.3
SF3A3-202ENST00000460925 LYSMD3Q7Z3D4 306 aa6.9□□□□□ -1.3
SF3A3-202ENST00000460925 FRMD6Q96NE9 622 aa6.9□□□□□ -1.3
SF3A3-202ENST00000460925 CSRNP1Q96S65 589 aa6.9□□□□□ -1.3
SF3A3-202ENST00000460925 GGNBP2Q9H3C7 697 aa6.9□□□□□ -1.3
SF3A3-202ENST00000460925 TMEM2Q9UHN6 1383 aa6.9□□□□□ -1.31
SF3A3-202ENST00000460925 PRAG1Q86YV5 1406 aa6.9□□□□□ -1.31
SF3A3-202ENST00000460925 MYOM2P54296 1465 aa6.9□□□□□ -1.31
SF3A3-202ENST00000460925 PNMA6FA0A0J9YX94 578 aa6.89□□□□□ -1.31
SF3A3-202ENST00000460925 A0A1B0GTH6 734 aa6.89□□□□□ -1.31
SF3A3-202ENST00000460925 SCAMP3O14828 347 aaKnown RBP6.89□□□□□ -1.31
SF3A3-202ENST00000460925 POU4F2Q12837 409 aa6.89□□□□□ -1.31
SF3A3-202ENST00000460925 TSNAXIP1Q2TAA8 658 aa6.89□□□□□ -1.31
SF3A3-202ENST00000460925 MRPL14Q6P1L8 145 aaKnown RBP6.89□□□□□ -1.31
SF3A3-202ENST00000460925 AIDAQ96BJ3 306 aa6.89□□□□□ -1.31
SF3A3-202ENST00000460925 ZIC5Q96T25 663 aa6.89□□□□□ -1.31
SF3A3-202ENST00000460925 CFHR5Q9BXR6 569 aa6.89□□□□□ -1.31
SF3A3-202ENST00000460925 C11orf16Q9NQ32 467 aa6.89□□□□□ -1.31
SF3A3-202ENST00000460925 WWC3Q9ULE0 1092 aa6.89□□□□□ -1.31
SF3A3-202ENST00000460925 SCAF11Q99590 1463 aaKnown RBP6.89□□□□□ -1.31
SF3A3-202ENST00000460925 NRXN1Q9ULB1 1477 aa6.89□□□□□ -1.31
SF3A3-202ENST00000460925 ALKQ9UM73 1620 aa6.88□□□□□ -1.31
SF3A3-202ENST00000460925 SETBP1Q9Y6X0 1596 aa6.88□□□□□ -1.31
SF3A3-202ENST00000460925 PIK3C2GO75747 1445 aa6.88□□□□□ -1.31
SF3A3-202ENST00000460925 EIF1AYO14602 144 aaKnown RBP6.88□□□□□ -1.31
SF3A3-202ENST00000460925 SORBS3O60504 671 aa6.88□□□□□ -1.31
SF3A3-202ENST00000460925 BMP2P12643 396 aa6.88□□□□□ -1.31
SF3A3-202ENST00000460925 GNA15P30679 374 aa6.88□□□□□ -1.31
SF3A3-202ENST00000460925 PHKA2P46019 1235 aa6.88□□□□□ -1.31
SF3A3-202ENST00000460925 IDH3AP50213 366 aa6.88□□□□□ -1.31
SF3A3-202ENST00000460925 ARSDP51689 593 aa6.88□□□□□ -1.31
SF3A3-202ENST00000460925 ZNF280CQ8ND82 737 aa6.88□□□□□ -1.31
SF3A3-202ENST00000460925 KLRG1Q96E93 195 aa6.88□□□□□ -1.31
SF3A3-202ENST00000460925 STRCP1A6NGW2 1772 aa6.87□□□□□ -1.31
SF3A3-202ENST00000460925 KIAA1210Q9ULL0 1709 aa6.87□□□□□ -1.31
SF3A3-202ENST00000460925 LAMC1P11047 1609 aa6.87□□□□□ -1.31
SF3A3-202ENST00000460925 RALGAPBQ86X10 1494 aa6.87□□□□□ -1.31
SF3A3-202ENST00000460925 MSX1P28360 303 aa6.87□□□□□ -1.31
SF3A3-202ENST00000460925 SMCPP49901 116 aaPredicted RBP6.87□□□□□ -1.31
SF3A3-202ENST00000460925 PSMD2Q13200 908 aa6.87□□□□□ -1.31
SF3A3-202ENST00000460925 TAF7LQ5H9L4 462 aa6.87□□□□□ -1.31
SF3A3-202ENST00000460925 PDE12Q6L8Q7 609 aaKnown RBP6.87□□□□□ -1.31
SF3A3-202ENST00000460925 PRICKLE2Q7Z3G6 844 aa6.87□□□□□ -1.31
SF3A3-202ENST00000460925 BTLAQ7Z6A9 289 aa6.87□□□□□ -1.31
SF3A3-202ENST00000460925 TTC16Q8NEE8 873 aa6.87□□□□□ -1.31
SF3A3-202ENST00000460925 SETDB2Q96T68 719 aa6.87□□□□□ -1.31
SF3A3-202ENST00000460925 CRISPLD1Q9H336 500 aa6.87□□□□□ -1.31
SF3A3-202ENST00000460925 MRS2Q9HD23 443 aa6.87□□□□□ -1.31
SF3A3-202ENST00000460925 METTL5Q9NRN9 209 aaKnown RBP6.87□□□□□ -1.31
SF3A3-202ENST00000460925 FNDC3AQ9Y2H6 1198 aaKnown RBP6.87□□□□□ -1.31
SF3A3-202ENST00000460925 ARHGEF28Q8N1W1 1705 aaKnown RBP6.87□□□□□ -1.31
SF3A3-202ENST00000460925 ADAMTS13Q76LX8 1427 aa6.86□□□□□ -1.31
SF3A3-202ENST00000460925 SOS2Q07890 1332 aaPredicted RBP6.86□□□□□ -1.31
SF3A3-202ENST00000460925 TTLL8A6PVC2 850 aa6.86□□□□□ -1.31
SF3A3-202ENST00000460925 ORC1Q13415 861 aa6.86□□□□□ -1.31
SF3A3-202ENST00000460925 C8orf34Q49A92 452 aa6.86□□□□□ -1.31
SF3A3-202ENST00000460925 BICDL1Q6ZP65 573 aa6.86□□□□□ -1.31
SF3A3-202ENST00000460925 THEMISQ8N1K5 641 aaPredicted RBP6.86□□□□□ -1.31
SF3A3-202ENST00000460925 HSH2DQ96JZ2 352 aa6.86□□□□□ -1.31
SF3A3-202ENST00000460925 FAM161BQ96MY7 647 aa6.86□□□□□ -1.31
SF3A3-202ENST00000460925 SLC26A8Q96RN1 970 aa6.86□□□□□ -1.31
SF3A3-202ENST00000460925 TIMMDC1Q9NPL8 285 aa6.86□□□□□ -1.31
SF3A3-202ENST00000460925 RNF19AQ9NV58 838 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms