RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 FGFR2P21802 821 aa12.52□□□□□ -0.41
UPF2-204ENST00000460569 ARHGAP27Q6ZUM4 889 aa12.52□□□□□ -0.41
UPF2-204ENST00000460569 AACSQ86V21 672 aa12.52□□□□□ -0.41
UPF2-204ENST00000460569 NEUROD6Q96NK8 337 aa12.52□□□□□ -0.41
UPF2-204ENST00000460569 PSMD1Q99460 953 aa12.52□□□□□ -0.41
UPF2-204ENST00000460569 EYA3Q99504 573 aa12.52□□□□□ -0.41
UPF2-204ENST00000460569 RTFDC1Q9BY42 306 aaPredicted RBP12.52□□□□□ -0.41
UPF2-204ENST00000460569 GPR108Q9NPR9 543 aa12.52□□□□□ -0.41
UPF2-204ENST00000460569 SBF1O95248 1867 aa12.52□□□□□ -0.41
UPF2-204ENST00000460569 DICER1Q9UPY3 1922 aaKnown RBP12.51□□□□□ -0.41
UPF2-204ENST00000460569 RIMBP2O15034 1052 aa12.51□□□□□ -0.41
UPF2-204ENST00000460569 KLRK1P26718 216 aa12.51□□□□□ -0.41
UPF2-204ENST00000460569 TIMM10P62072 90 aa12.51□□□□□ -0.41
UPF2-204ENST00000460569 NUCB1Q02818 461 aa12.51□□□□□ -0.41
UPF2-204ENST00000460569 EAF2Q96CJ1 260 aaPredicted RBP12.51□□□□□ -0.41
UPF2-204ENST00000460569 LNPKQ9C0E8 428 aa12.51□□□□□ -0.41
UPF2-204ENST00000460569 CCDC8Q9H0W5 538 aaPredicted RBP12.51□□□□□ -0.41
UPF2-204ENST00000460569 ZNF277Q9NRM2 450 aaPredicted RBP12.51□□□□□ -0.41
UPF2-204ENST00000460569 LTBP3Q9NS15 1303 aa12.51□□□□□ -0.41
UPF2-204ENST00000460569 SRCAPQ6ZRS2 3230 aa12.5□□□□□ -0.41
UPF2-204ENST00000460569 PPIP5K2O43314 1243 aa12.5□□□□□ -0.41
UPF2-204ENST00000460569 IFIT2P09913 472 aaKnown RBP12.5□□□□□ -0.41
UPF2-204ENST00000460569 ADORA1P30542 326 aa12.5□□□□□ -0.41
UPF2-204ENST00000460569 AOC3Q16853 763 aa12.5□□□□□ -0.41
UPF2-204ENST00000460569 WASHC4Q2M389 1173 aa12.5□□□□□ -0.41
UPF2-204ENST00000460569 GORABQ5T7V8 394 aa12.5□□□□□ -0.41
UPF2-204ENST00000460569 CHD1LQ86WJ1 897 aa12.5□□□□□ -0.41
UPF2-204ENST00000460569 DBNDD2Q9BQY9 259 aa12.5□□□□□ -0.41
UPF2-204ENST00000460569 ZC3H12CQ9C0D7 883 aaKnown RBP12.5□□□□□ -0.41
UPF2-204ENST00000460569 TLR7Q9NYK1 1049 aaKnown RBP12.5□□□□□ -0.41
UPF2-204ENST00000460569 CHD4Q14839 1912 aa12.49□□□□□ -0.41
UPF2-204ENST00000460569 IRS2Q9Y4H2 1338 aa12.49□□□□□ -0.41
UPF2-204ENST00000460569 DCAF8L1A6NGE4 600 aa12.49□□□□□ -0.41
UPF2-204ENST00000460569 GRIN3BO60391 1043 aa12.49□□□□□ -0.41
UPF2-204ENST00000460569 IARSP41252 1262 aaKnown RBP12.49□□□□□ -0.41
UPF2-204ENST00000460569 GYG1P46976 350 aa12.49□□□□□ -0.41
UPF2-204ENST00000460569 KIAA2012Q0VF49 1180 aa12.49□□□□□ -0.41
UPF2-204ENST00000460569 CAVIN4Q5BKX8 364 aa12.49□□□□□ -0.41
UPF2-204ENST00000460569 ZNF804AQ7Z570 1209 aa12.49□□□□□ -0.41
UPF2-204ENST00000460569 TXNRD3Q86VQ6 643 aa12.49□□□□□ -0.41
UPF2-204ENST00000460569 VPS37DQ86XT2 251 aa12.49□□□□□ -0.41
UPF2-204ENST00000460569 XAGE2Q96GT9 111 aa12.49□□□□□ -0.41
UPF2-204ENST00000460569 DBNLQ9UJU6 430 aaKnown RBP12.49□□□□□ -0.41
UPF2-204ENST00000460569 COL4A5P29400 1685 aa12.48□□□□□ -0.41
UPF2-204ENST00000460569 G3V3G9 751 aa12.48□□□□□ -0.41
UPF2-204ENST00000460569 DCAF8Q5TAQ9 597 aa12.48□□□□□ -0.41
UPF2-204ENST00000460569 C15orf52Q6ZUT6 534 aaKnown RBP12.48□□□□□ -0.41
UPF2-204ENST00000460569 LARGE2Q8N3Y3 721 aa12.48□□□□□ -0.41
UPF2-204ENST00000460569 PSME4Q14997 1843 aa12.48□□□□□ -0.41
UPF2-204ENST00000460569 HIBADHP31937 336 aaKnown RBP12.47□□□□□ -0.41
UPF2-204ENST00000460569 PHKA1P46020 1223 aa12.47□□□□□ -0.41
UPF2-204ENST00000460569 BCAMP50895 628 aa12.47□□□□□ -0.41
UPF2-204ENST00000460569 DOK7Q18PE1 504 aa12.47□□□□□ -0.41
UPF2-204ENST00000460569 TTC39AQ5SRH9 613 aa12.47□□□□□ -0.41
UPF2-204ENST00000460569 C16orf71Q8IYS4 520 aaPredicted RBP12.47□□□□□ -0.41
UPF2-204ENST00000460569 OTUD7AQ8TE49 926 aaPredicted RBP12.47□□□□□ -0.41
UPF2-204ENST00000460569 GPATCH3Q96I76 525 aa12.47□□□□□ -0.41
UPF2-204ENST00000460569 FAM84BQ96KN1 310 aaPredicted RBP12.47□□□□□ -0.41
UPF2-204ENST00000460569 VPS33BQ9H267 617 aa12.47□□□□□ -0.41
UPF2-204ENST00000460569 DBNDD1Q9H9R9 158 aa12.47□□□□□ -0.41
UPF2-204ENST00000460569 SCN9AQ15858 1988 aa12.47□□□□□ -0.41
UPF2-204ENST00000460569 ZNF646O15015 1829 aaPredicted RBP12.46□□□□□ -0.41
UPF2-204ENST00000460569 ECE2O60344 883 aa12.46□□□□□ -0.41
UPF2-204ENST00000460569 LMNB1P20700 586 aa12.46□□□□□ -0.41
UPF2-204ENST00000460569 PRELPP51888 382 aa12.46□□□□□ -0.41
UPF2-204ENST00000460569 CCDC158Q5M9N0 1113 aa12.46□□□□□ -0.41
UPF2-204ENST00000460569 CCDC102BQ68D86 513 aa12.46□□□□□ -0.41
UPF2-204ENST00000460569 FBXO33Q7Z6M2 555 aa12.46□□□□□ -0.41
UPF2-204ENST00000460569 NIM1KQ8IY84 436 aa12.46□□□□□ -0.41
UPF2-204ENST00000460569 COA1Q9GZY4 146 aa12.46□□□□□ -0.41
UPF2-204ENST00000460569 IQSEC3Q9UPP2 1182 aaPredicted RBP12.46□□□□□ -0.41
UPF2-204ENST00000460569 GOLGB1Q14789 3259 aaKnown RBP12.45□□□□□ -0.42
UPF2-204ENST00000460569 AKAP11Q9UKA4 1901 aa12.45□□□□□ -0.42
UPF2-204ENST00000460569 FRAT2O75474 233 aaPredicted RBP12.45□□□□□ -0.42
UPF2-204ENST00000460569 MX1P20591 662 aa12.45□□□□□ -0.42
UPF2-204ENST00000460569 PDE4AP27815 886 aa12.45□□□□□ -0.42
UPF2-204ENST00000460569 TSHZ3Q63HK5 1081 aa12.45□□□□□ -0.42
UPF2-204ENST00000460569 JDP2Q8WYK2 163 aa12.45□□□□□ -0.42
UPF2-204ENST00000460569 CD209Q9NNX6 404 aa12.45□□□□□ -0.42
UPF2-204ENST00000460569 GNL3LQ9NVN8 582 aaKnown RBP12.45□□□□□ -0.42
UPF2-204ENST00000460569 RNF181Q9P0P0 153 aa12.45□□□□□ -0.42
UPF2-204ENST00000460569 COL1A1P02452 1464 aaPredicted RBP12.45□□□□□ -0.42
UPF2-204ENST00000460569 SALL3Q9BXA9 1300 aa12.44□□□□□ -0.42
UPF2-204ENST00000460569 UQCRFS1P1P0C7P4 283 aa12.44□□□□□ -0.42
UPF2-204ENST00000460569 ARID4AP29374 1257 aaPredicted RBP12.44□□□□□ -0.42
UPF2-204ENST00000460569 FBXW7Q969H0 707 aa12.44□□□□□ -0.42
UPF2-204ENST00000460569 ECHDC1Q9NTX5 307 aa12.44□□□□□ -0.42
UPF2-204ENST00000460569 AK9Q5TCS8 1911 aa12.44□□□□□ -0.42
UPF2-204ENST00000460569 TTC41PQ6P2S7 1318 aa12.43□□□□□ -0.42
UPF2-204ENST00000460569 IL1R1P14778 569 aa12.43□□□□□ -0.42
UPF2-204ENST00000460569 PDE1AP54750 535 aa12.43□□□□□ -0.42
UPF2-204ENST00000460569 CHAF1AQ13111 956 aaPredicted RBP12.43□□□□□ -0.42
UPF2-204ENST00000460569 RASGRF1Q13972 1273 aa12.43□□□□□ -0.42
UPF2-204ENST00000460569 C9orf131Q5VYM1 1079 aa12.43□□□□□ -0.42
UPF2-204ENST00000460569 PODNQ7Z5L7 613 aa12.43□□□□□ -0.42
UPF2-204ENST00000460569 SKAP1Q86WV1 359 aa12.43□□□□□ -0.42
UPF2-204ENST00000460569 TDRD7Q8NHU6 1098 aaKnown RBP12.43□□□□□ -0.42
UPF2-204ENST00000460569 DOCK2Q92608 1830 aa12.42□□□□□ -0.42
UPF2-204ENST00000460569 YDJCA8MPS7 323 aa12.42□□□□□ -0.42
UPF2-204ENST00000460569 SEMA3EO15041 775 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms