RNA–Protein interactions for RNA: ENST00000460469.1

NMD3-202, Transcript of NMD3 ribosome export adaptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NMD3, Length 3,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-202ENST00000460469 RXRAP19793 462 aa20.39■□□□□ 0.85
NMD3-202ENST00000460469 PDIA3P30101 505 aaKnown RBP20.39■□□□□ 0.85
NMD3-202ENST00000460469 FAM89AQ96GI7 184 aa20.39■□□□□ 0.85
NMD3-202ENST00000460469 ALDH8A1Q9H2A2 487 aaPredicted RBP20.39■□□□□ 0.85
NMD3-202ENST00000460469 C1orf167Q5SNV9 1468 aa20.39■□□□□ 0.85
NMD3-202ENST00000460469 ATF3P18847 181 aa20.39■□□□□ 0.85
NMD3-202ENST00000460469 SLIT3O75094 1523 aa20.38■□□□□ 0.85
NMD3-202ENST00000460469 HMGN5P82970 282 aaKnown RBP20.38■□□□□ 0.85
NMD3-202ENST00000460469 PPP4R3BQ5MIZ7 849 aa20.38■□□□□ 0.85
NMD3-202ENST00000460469 PKNOX2Q96KN3 472 aa20.38■□□□□ 0.85
NMD3-202ENST00000460469 BIN1O00499 593 aa20.38■□□□□ 0.85
NMD3-202ENST00000460469 FDPSP14324 419 aaKnown RBP20.38■□□□□ 0.85
NMD3-202ENST00000460469 SNW1Q13573 536 aaKnown RBP20.38■□□□□ 0.85
NMD3-202ENST00000460469 ATP2B3Q16720 1220 aa20.38■□□□□ 0.85
NMD3-202ENST00000460469 PLA2G4DQ86XP0 818 aa20.38■□□□□ 0.85
NMD3-202ENST00000460469 SMARCC2Q8TAQ2 1214 aa20.38■□□□□ 0.85
NMD3-202ENST00000460469 CWC25Q9NXE8 425 aaPredicted RBP20.38■□□□□ 0.85
NMD3-202ENST00000460469 H7C1W4 665 aa20.38■□□□□ 0.85
NMD3-202ENST00000460469 GORABQ5T7V8 394 aa20.38■□□□□ 0.85
NMD3-202ENST00000460469 EXOSC10Q01780 885 aaKnown RBP20.37■□□□□ 0.85
NMD3-202ENST00000460469 FSIP1Q8NA03 581 aa20.37■□□□□ 0.85
NMD3-202ENST00000460469 TRMT1Q9NXH9 659 aaKnown RBP20.37■□□□□ 0.85
NMD3-202ENST00000460469 CFAP45Q9UL16 551 aa20.37■□□□□ 0.85
NMD3-202ENST00000460469 OVOS2A0A0G2JMS6 1433 aa20.36■□□□□ 0.85
NMD3-202ENST00000460469 ZMYM1Q5SVZ6 1142 aa20.36■□□□□ 0.85
NMD3-202ENST00000460469 RBM43Q6ZSC3 357 aaKnown RBP20.36■□□□□ 0.85
NMD3-202ENST00000460469 GOLGA6L19H0YKK7 550 aa20.36■□□□□ 0.85
NMD3-202ENST00000460469 FOXP2O15409 715 aa20.36■□□□□ 0.85
NMD3-202ENST00000460469 IQCB1Q15051 598 aa20.36■□□□□ 0.85
NMD3-202ENST00000460469 PTPN21Q16825 1174 aa20.36■□□□□ 0.85
NMD3-202ENST00000460469 AIFM3Q96NN9 605 aa20.36■□□□□ 0.85
NMD3-202ENST00000460469 PUS7LQ9H0K6 701 aaKnown RBP20.36■□□□□ 0.85
NMD3-202ENST00000460469 CLIC4Q9Y696 253 aa20.36■□□□□ 0.85
NMD3-202ENST00000460469 IGSF3O75054 1194 aa20.35■□□□□ 0.85
NMD3-202ENST00000460469 TOM1L2Q6ZVM7 507 aa20.35■□□□□ 0.85
NMD3-202ENST00000460469 TDRD7Q8NHU6 1098 aaKnown RBP20.35■□□□□ 0.85
NMD3-202ENST00000460469 SIPA1L3O60292 1781 aaPredicted RBP20.35■□□□□ 0.85
NMD3-202ENST00000460469 PALLDQ8WX93 1383 aa20.35■□□□□ 0.85
NMD3-202ENST00000460469 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.35■□□□□ 0.85
NMD3-202ENST00000460469 V9GYY5 206 aaPredicted RBP20.35■□□□□ 0.85
NMD3-202ENST00000460469 EYA2O00167 538 aa20.35■□□□□ 0.85
NMD3-202ENST00000460469 ZSCAN16Q9H4T2 348 aaPredicted RBP20.35■□□□□ 0.85
NMD3-202ENST00000460469 STRN4Q9NRL3 753 aa20.35■□□□□ 0.85
NMD3-202ENST00000460469 RNF113AO15541 343 aaKnown RBP20.34■□□□□ 0.85
NMD3-202ENST00000460469 U2AF2P26368 475 aaKnown RBP eCLIP20.34■□□□□ 0.85
NMD3-202ENST00000460469 INCENPQ9NQS7 918 aa20.34■□□□□ 0.85
NMD3-202ENST00000460469 PCDHA7Q9UN72 937 aa20.34■□□□□ 0.85
NMD3-202ENST00000460469 BECN2A8MW95 431 aa20.34■□□□□ 0.85
NMD3-202ENST00000460469 TNNT1P13805 278 aa20.34■□□□□ 0.85
NMD3-202ENST00000460469 ZAP70P43403 619 aa20.34■□□□□ 0.85
NMD3-202ENST00000460469 CHAF1AQ13111 956 aaPredicted RBP20.34■□□□□ 0.85
NMD3-202ENST00000460469 AOPEPQ8N6M6 819 aa20.34■□□□□ 0.85
NMD3-202ENST00000460469 MAP7D2Q96T17 732 aa20.34■□□□□ 0.85
NMD3-202ENST00000460469 SH3TC1Q8TE82 1336 aa20.34■□□□□ 0.85
NMD3-202ENST00000460469 UBE2Q2LH0YL09 131 aa20.33■□□□□ 0.85
NMD3-202ENST00000460469 GPTP24298 496 aa20.33■□□□□ 0.85
NMD3-202ENST00000460469 TPD52L1Q16890 204 aaPredicted RBP20.33■□□□□ 0.85
NMD3-202ENST00000460469 KINO60870 393 aaKnown RBP20.33■□□□□ 0.84
NMD3-202ENST00000460469 FGAP02671 866 aa20.33■□□□□ 0.84
NMD3-202ENST00000460469 NDUFA8P51970 172 aa20.33■□□□□ 0.84
NMD3-202ENST00000460469 CCDC73Q6ZRK6 1079 aa20.33■□□□□ 0.84
NMD3-202ENST00000460469 SDF4Q9BRK5 362 aa20.33■□□□□ 0.84
NMD3-202ENST00000460469 RCOR1Q9UKL0 485 aa20.33■□□□□ 0.84
NMD3-202ENST00000460469 STK11IPQ8N1F8 1099 aa20.33■□□□□ 0.84
NMD3-202ENST00000460469 MRC1P22897 1456 aa20.32■□□□□ 0.84
NMD3-202ENST00000460469 IL15P40933 162 aaPredicted RBP20.32■□□□□ 0.84
NMD3-202ENST00000460469 XAGE2Q96GT9 111 aa20.32■□□□□ 0.84
NMD3-202ENST00000460469 GTF2F1P35269 517 aaKnown RBP eCLIP20.32■□□□□ 0.84
NMD3-202ENST00000460469 CCDC94Q9BW85 323 aaPredicted RBP20.32■□□□□ 0.84
NMD3-202ENST00000460469 HELLSQ9NRZ9 838 aa20.32■□□□□ 0.84
NMD3-202ENST00000460469 CEP126Q9P2H0 1117 aa20.32■□□□□ 0.84
NMD3-202ENST00000460469 CARMIL3Q8ND23 1372 aa20.32■□□□□ 0.84
NMD3-202ENST00000460469 KLF18A0A0U1RQI7 1052 aa20.31■□□□□ 0.84
NMD3-202ENST00000460469 MARCKSP29966 332 aaPredicted RBP20.31■□□□□ 0.84
NMD3-202ENST00000460469 DHX40Q8IX18 779 aaKnown RBP20.31■□□□□ 0.84
NMD3-202ENST00000460469 DSCC1Q9BVC3 393 aa20.31■□□□□ 0.84
NMD3-202ENST00000460469 SNAP23O00161 211 aa20.31■□□□□ 0.84
NMD3-202ENST00000460469 TTC39AQ5SRH9 613 aa20.31■□□□□ 0.84
NMD3-202ENST00000460469 TMEM94Q12767 1356 aa20.31■□□□□ 0.84
NMD3-202ENST00000460469 KIF28PB7ZC32 967 aa20.3■□□□□ 0.84
NMD3-202ENST00000460469 CCDC57Q2TAC2 916 aa20.3■□□□□ 0.84
NMD3-202ENST00000460469 ENGASEQ8NFI3 743 aa20.3■□□□□ 0.84
NMD3-202ENST00000460469 SENP2Q9HC62 589 aa20.3■□□□□ 0.84
NMD3-202ENST00000460469 GOLGA8BA8MQT2 603 aa20.3■□□□□ 0.84
NMD3-202ENST00000460469 NPHP1O15259 732 aa20.3■□□□□ 0.84
NMD3-202ENST00000460469 AFDNP55196 1824 aaKnown RBP20.3■□□□□ 0.84
NMD3-202ENST00000460469 DPCR1Q3MIW9 517 aa20.3■□□□□ 0.84
NMD3-202ENST00000460469 SF3A1Q15459 793 aaKnown RBP20.3■□□□□ 0.84
NMD3-202ENST00000460469 PRDM11Q9NQV5 511 aa20.3■□□□□ 0.84
NMD3-202ENST00000460469 PHRF1Q9P1Y6 1649 aaKnown RBP20.29■□□□□ 0.84
NMD3-202ENST00000460469 PRC1O43663 620 aa20.29■□□□□ 0.84
NMD3-202ENST00000460469 NAA16Q6N069 864 aaPredicted RBP20.29■□□□□ 0.84
NMD3-202ENST00000460469 LRRC8AQ8IWT6 810 aa20.29■□□□□ 0.84
NMD3-202ENST00000460469 PDCL2Q8N4E4 241 aa20.29■□□□□ 0.84
NMD3-202ENST00000460469 ZCRB1Q8TBF4 217 aaKnown RBP20.29■□□□□ 0.84
NMD3-202ENST00000460469 ZHX1Q9UKY1 873 aaPredicted RBP20.29■□□□□ 0.84
NMD3-202ENST00000460469 SALL1Q9NSC2 1324 aa20.29■□□□□ 0.84
NMD3-202ENST00000460469 HMGB1P09429 215 aaKnown RBP20.29■□□□□ 0.84
NMD3-202ENST00000460469 TAF7LQ5H9L4 462 aa20.29■□□□□ 0.84
NMD3-202ENST00000460469 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.29■□□□□ 0.844e-7■■□□□ 12
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms