RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 WDR33Q9C0J8 1336 aaKnown RBP12.64□□□□□ -0.39
HDLBP-228ENST00000459788 USP17L8P0C7I0 530 aa12.64□□□□□ -0.39
HDLBP-228ENST00000459788 MAP2K2P36507 400 aa12.64□□□□□ -0.39
HDLBP-228ENST00000459788 CHRNDQ07001 517 aa12.64□□□□□ -0.39
HDLBP-228ENST00000459788 KIF4BQ2VIQ3 1234 aa12.64□□□□□ -0.39
HDLBP-228ENST00000459788 LMBR1LQ6UX01 489 aa12.64□□□□□ -0.39
HDLBP-228ENST00000459788 SAMD7Q7Z3H4 446 aa12.64□□□□□ -0.39
HDLBP-228ENST00000459788 SAPCD2Q86UD0 394 aa12.64□□□□□ -0.39
HDLBP-228ENST00000459788 GPR101Q96P66 508 aaPredicted RBP12.64□□□□□ -0.39
HDLBP-228ENST00000459788 GLIS2Q9BZE0 524 aaPredicted RBP12.64□□□□□ -0.39
HDLBP-228ENST00000459788 CELF2O95319 508 aaKnown RBP12.63□□□□□ -0.39
HDLBP-228ENST00000459788 KCNJ4P48050 445 aa12.63□□□□□ -0.39
HDLBP-228ENST00000459788 RABL6Q3YEC7 729 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-228ENST00000459788 TBC1D10BQ4KMP7 808 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-228ENST00000459788 DACT2Q5SW24 774 aa12.63□□□□□ -0.39
HDLBP-228ENST00000459788 OGFOD1Q8N543 542 aa12.63□□□□□ -0.39
HDLBP-228ENST00000459788 AIDAQ96BJ3 306 aa12.63□□□□□ -0.39
HDLBP-228ENST00000459788 PRDM10Q9NQV6 1147 aa12.63□□□□□ -0.39
HDLBP-228ENST00000459788 WBP1LQ9NX94 342 aa12.63□□□□□ -0.39
HDLBP-228ENST00000459788 IRS2Q9Y4H2 1338 aa12.62□□□□□ -0.39
HDLBP-228ENST00000459788 ARAP2Q8WZ64 1704 aa12.62□□□□□ -0.39
HDLBP-228ENST00000459788 SHTN1A0MZ66 631 aa12.62□□□□□ -0.39
HDLBP-228ENST00000459788 TRAF5O00463 557 aa12.62□□□□□ -0.39
HDLBP-228ENST00000459788 CTCFP49711 727 aaPredicted RBP12.62□□□□□ -0.39
HDLBP-228ENST00000459788 FKBP1AP62942 108 aaKnown RBP12.62□□□□□ -0.39
HDLBP-228ENST00000459788 FKBP1BP68106 108 aa12.62□□□□□ -0.39
HDLBP-228ENST00000459788 SLC4A10Q6U841 1118 aa12.62□□□□□ -0.39
HDLBP-228ENST00000459788 LDHAL6AQ6ZMR3 332 aa12.62□□□□□ -0.39
HDLBP-228ENST00000459788 KRT26Q7Z3Y9 468 aa12.62□□□□□ -0.39
HDLBP-228ENST00000459788 SULF1Q8IWU6 871 aa12.62□□□□□ -0.39
HDLBP-228ENST00000459788 SSH1Q8WYL5 1049 aa12.62□□□□□ -0.39
HDLBP-228ENST00000459788 CAPNS2Q96L46 248 aa12.62□□□□□ -0.39
HDLBP-228ENST00000459788 MYOZ2Q9NPC6 264 aa12.62□□□□□ -0.39
HDLBP-228ENST00000459788 HDAC5Q9UQL6 1122 aa12.62□□□□□ -0.39
HDLBP-228ENST00000459788 AKAP11Q9UKA4 1901 aa12.62□□□□□ -0.39
HDLBP-228ENST00000459788 CA12O43570 354 aa12.61□□□□□ -0.39
HDLBP-228ENST00000459788 IL1R1P14778 569 aa12.61□□□□□ -0.39
HDLBP-228ENST00000459788 UBE4AQ14139 1066 aa12.61□□□□□ -0.39
HDLBP-228ENST00000459788 TAF7LQ5H9L4 462 aa12.61□□□□□ -0.39
HDLBP-228ENST00000459788 ZNF804AQ7Z570 1209 aa12.61□□□□□ -0.39
HDLBP-228ENST00000459788 PAPPA2Q9BXP8 1791 aa12.61□□□□□ -0.39
HDLBP-228ENST00000459788 MROH5Q6ZUA9 1318 aa12.61□□□□□ -0.39
HDLBP-228ENST00000459788 EGFRP00533 1210 aa12.6□□□□□ -0.39
HDLBP-228ENST00000459788 EPHA10Q5JZY3 1008 aa12.6□□□□□ -0.39
HDLBP-228ENST00000459788 TTLL5Q6EMB2 1281 aa12.6□□□□□ -0.39
HDLBP-228ENST00000459788 USP48Q86UV5 1035 aa12.6□□□□□ -0.39
HDLBP-228ENST00000459788 C2orf69Q8N8R5 385 aa12.6□□□□□ -0.39
HDLBP-228ENST00000459788 CD209Q9NNX6 404 aa12.6□□□□□ -0.39
HDLBP-228ENST00000459788 CNNM1Q9NRU3 951 aa12.6□□□□□ -0.39
HDLBP-228ENST00000459788 HDAC9Q9UKV0 1011 aa12.6□□□□□ -0.39
HDLBP-228ENST00000459788 CHMP3Q9Y3E7 222 aa12.6□□□□□ -0.39
HDLBP-228ENST00000459788 MYH13Q9UKX3 1938 aa12.6□□□□□ -0.39
HDLBP-228ENST00000459788 COL1A1P02452 1464 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-228ENST00000459788 NBPF7P0C2Y1 421 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-228ENST00000459788 FMR1Q06787 632 aaKnown RBP eCLIP12.59□□□□□ -0.394e-9■■□□□ 12.8
HDLBP-228ENST00000459788 NOGQ13253 232 aa12.59□□□□□ -0.39
HDLBP-228ENST00000459788 SCARF1Q14162 830 aa12.59□□□□□ -0.39
HDLBP-228ENST00000459788 TXNRD3Q86VQ6 643 aa12.59□□□□□ -0.39
HDLBP-228ENST00000459788 REM2Q8IYK8 340 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-228ENST00000459788 MTMR14Q8NCE2 650 aa12.59□□□□□ -0.39
HDLBP-228ENST00000459788 ARHGAP45Q92619 1136 aa12.59□□□□□ -0.39
HDLBP-228ENST00000459788 KAZALD1Q96I82 304 aa12.59□□□□□ -0.39
HDLBP-228ENST00000459788 GBA2Q9HCG7 927 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-228ENST00000459788 GGA3Q9NZ52 723 aa12.59□□□□□ -0.39
HDLBP-228ENST00000459788 FBXO3Q9UK99 471 aa12.59□□□□□ -0.39
HDLBP-228ENST00000459788 WTIPA6NIX2 430 aaPredicted RBP12.58□□□□□ -0.4
HDLBP-228ENST00000459788 FOXN1O15353 648 aa12.58□□□□□ -0.4
HDLBP-228ENST00000459788 RBM26Q5T8P6 1007 aaKnown RBP12.58□□□□□ -0.4
HDLBP-228ENST00000459788 COL13A1Q5TAT6 717 aaPredicted RBP12.58□□□□□ -0.4
HDLBP-228ENST00000459788 CCDC102AQ96A19 550 aa12.58□□□□□ -0.4
HDLBP-228ENST00000459788 SUCLG2Q96I99 432 aa12.58□□□□□ -0.4
HDLBP-228ENST00000459788 BEGAINQ9BUH8 593 aa12.58□□□□□ -0.4
HDLBP-228ENST00000459788 API5Q9BZZ5 524 aaKnown RBP12.58□□□□□ -0.4
HDLBP-228ENST00000459788 USP44Q9H0E7 712 aa12.58□□□□□ -0.4
HDLBP-228ENST00000459788 SMC4Q9NTJ3 1288 aa12.58□□□□□ -0.4
HDLBP-228ENST00000459788 FAM205AQ6ZU69 1335 aa12.58□□□□□ -0.4
HDLBP-228ENST00000459788 KIF16BQ96L93 1317 aa12.58□□□□□ -0.4
HDLBP-228ENST00000459788 SASH1O94885 1247 aa12.57□□□□□ -0.4
HDLBP-228ENST00000459788 HUNKP57058 714 aa12.57□□□□□ -0.4
HDLBP-228ENST00000459788 ANGEL2Q5VTE6 544 aaKnown RBP12.57□□□□□ -0.4
HDLBP-228ENST00000459788 CYP4F22Q6NT55 531 aa12.57□□□□□ -0.4
HDLBP-228ENST00000459788 CDCA7LQ96GN5 454 aa12.57□□□□□ -0.4
HDLBP-228ENST00000459788 ZBED3Q96IU2 234 aaPredicted RBP12.57□□□□□ -0.4
HDLBP-228ENST00000459788 BICC1Q9H694 974 aaKnown RBP12.57□□□□□ -0.4
HDLBP-228ENST00000459788 RIPOR2Q9Y4F9 1068 aa12.57□□□□□ -0.4
HDLBP-228ENST00000459788 LAMB1P07942 1786 aa12.56□□□□□ -0.4
HDLBP-228ENST00000459788 WNT10BO00744 389 aa12.56□□□□□ -0.4
HDLBP-228ENST00000459788 TAF5LO75529 589 aa12.56□□□□□ -0.4
HDLBP-228ENST00000459788 GTF2IP78347 998 aa12.56□□□□□ -0.4
HDLBP-228ENST00000459788 RGMBQ6NW40 437 aa12.56□□□□□ -0.4
HDLBP-228ENST00000459788 PAXIP1Q6ZW49 1069 aaPredicted RBP12.56□□□□□ -0.4
HDLBP-228ENST00000459788 APOBEC3FQ8IUX4 373 aaKnown RBP12.56□□□□□ -0.4
HDLBP-228ENST00000459788 TNS4Q8IZW8 715 aa12.56□□□□□ -0.4
HDLBP-228ENST00000459788 ANKRD44Q8N8A2 993 aa12.56□□□□□ -0.4
HDLBP-228ENST00000459788 CDCA5Q96FF9 252 aa12.56□□□□□ -0.4
HDLBP-228ENST00000459788 ZNF594Q96JF6 807 aaPredicted RBP12.56□□□□□ -0.4
HDLBP-228ENST00000459788 ADM5C9JUS6 153 aa12.55□□□□□ -0.4
HDLBP-228ENST00000459788 ZBTB22O15209 634 aa12.55□□□□□ -0.4
HDLBP-228ENST00000459788 KLRK1P26718 216 aa12.55□□□□□ -0.4
HDLBP-228ENST00000459788 HELBQ8NG08 1087 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms