RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 CCDC191Q8NCU4 936 aa15.94■□□□□ 0.14
TOP3B-213ENST00000457179 TTC14Q96N46 770 aa15.94■□□□□ 0.14
TOP3B-213ENST00000457179 COPRSQ9NQ92 184 aa15.94■□□□□ 0.14
TOP3B-213ENST00000457179 H7C1W4 665 aa15.93■□□□□ 0.14
TOP3B-213ENST00000457179 UBE2HP62256 183 aa15.93■□□□□ 0.14
TOP3B-213ENST00000457179 IFIT5Q13325 482 aaKnown RBP15.93■□□□□ 0.14
TOP3B-213ENST00000457179 FAM173BQ6P4H8 233 aa15.93■□□□□ 0.14
TOP3B-213ENST00000457179 PHRF1Q9P1Y6 1649 aaKnown RBP15.93■□□□□ 0.14
TOP3B-213ENST00000457179 ZKSCAN1P17029 563 aaPredicted RBP15.93■□□□□ 0.14
TOP3B-213ENST00000457179 GJB2P29033 226 aa15.93■□□□□ 0.14
TOP3B-213ENST00000457179 ADORA1P30542 326 aa15.93■□□□□ 0.14
TOP3B-213ENST00000457179 CAMK4Q16566 473 aa15.93■□□□□ 0.14
TOP3B-213ENST00000457179 STX6O43752 255 aa15.93■□□□□ 0.14
TOP3B-213ENST00000457179 GREM2Q9H772 168 aa15.93■□□□□ 0.14
TOP3B-213ENST00000457179 CYP46A1Q9Y6A2 500 aa15.93■□□□□ 0.14
TOP3B-213ENST00000457179 KDM3BQ7LBC6 1761 aa15.93■□□□□ 0.14
TOP3B-213ENST00000457179 UTYO14607 1347 aa15.92■□□□□ 0.14
TOP3B-213ENST00000457179 USP54Q70EL1 1684 aa15.92■□□□□ 0.14
TOP3B-213ENST00000457179 FOSBP53539 338 aa15.92■□□□□ 0.14
TOP3B-213ENST00000457179 WASHC4Q2M389 1173 aa15.92■□□□□ 0.14
TOP3B-213ENST00000457179 MARCH10Q8NA82 808 aaPredicted RBP15.92■□□□□ 0.14
TOP3B-213ENST00000457179 ZNF215Q9UL58 517 aaPredicted RBP15.92■□□□□ 0.14
TOP3B-213ENST00000457179 TOM1O60784 492 aa15.92■□□□□ 0.14
TOP3B-213ENST00000457179 IRX3P78415 501 aaPredicted RBP15.92■□□□□ 0.14
TOP3B-213ENST00000457179 ELF2Q15723 593 aa15.92■□□□□ 0.14
TOP3B-213ENST00000457179 METTL24Q5JXM2 366 aa15.92■□□□□ 0.14
TOP3B-213ENST00000457179 CREB3L3Q68CJ9 461 aa15.92■□□□□ 0.14
TOP3B-213ENST00000457179 RPAP1Q9BWH6 1393 aaPredicted RBP15.92■□□□□ 0.14
TOP3B-213ENST00000457179 CCDC171Q6TFL3 1326 aa15.92■□□□□ 0.14
TOP3B-213ENST00000457179 IFIT1P09914 478 aaKnown RBP15.91■□□□□ 0.14
TOP3B-213ENST00000457179 ZNF397Q8NF99 534 aaPredicted RBP15.91■□□□□ 0.14
TOP3B-213ENST00000457179 GTF3C6Q969F1 213 aa15.91■□□□□ 0.14
TOP3B-213ENST00000457179 TRIM5Q9C035 493 aa15.91■□□□□ 0.14
TOP3B-213ENST00000457179 IRS4O14654 1257 aaPredicted RBP15.91■□□□□ 0.14
TOP3B-213ENST00000457179 CASP7P55210 303 aa15.91■□□□□ 0.14
TOP3B-213ENST00000457179 FBXO38Q6PIJ6 1188 aa15.91■□□□□ 0.14
TOP3B-213ENST00000457179 CHST3Q7LGC8 479 aa15.91■□□□□ 0.14
TOP3B-213ENST00000457179 IQSEC3Q9UPP2 1182 aaPredicted RBP15.91■□□□□ 0.14
TOP3B-213ENST00000457179 CCDC192P0DO97 292 aa15.91■□□□□ 0.14
TOP3B-213ENST00000457179 ZSCAN22P10073 491 aaPredicted RBP15.91■□□□□ 0.14
TOP3B-213ENST00000457179 CYP19A1P11511 503 aaPredicted RBP15.91■□□□□ 0.14
TOP3B-213ENST00000457179 ITGA6P23229 1130 aa15.91■□□□□ 0.14
TOP3B-213ENST00000457179 TNNT3P45378 269 aaPredicted RBP15.91■□□□□ 0.14
TOP3B-213ENST00000457179 DNM1Q05193 864 aaKnown RBP15.91■□□□□ 0.14
TOP3B-213ENST00000457179 ME3Q16798 604 aa15.91■□□□□ 0.14
TOP3B-213ENST00000457179 ATG9AQ7Z3C6 839 aa15.91■□□□□ 0.14
TOP3B-213ENST00000457179 STK11IPQ8N1F8 1099 aa15.91■□□□□ 0.14
TOP3B-213ENST00000457179 EYA2O00167 538 aa15.9■□□□□ 0.14
TOP3B-213ENST00000457179 CEP135Q66GS9 1140 aa15.9■□□□□ 0.14
TOP3B-213ENST00000457179 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.9■□□□□ 0.14
TOP3B-213ENST00000457179 CACNA1FO60840 1977 aa15.9■□□□□ 0.14
TOP3B-213ENST00000457179 COL18A1P39060 1754 aa15.9■□□□□ 0.14
TOP3B-213ENST00000457179 XIRP1Q702N8 1843 aaKnown RBP15.9■□□□□ 0.14
TOP3B-213ENST00000457179 TAF5LO75529 589 aa15.9■□□□□ 0.14
TOP3B-213ENST00000457179 HNRNPH2P55795 449 aaKnown RBP15.9■□□□□ 0.14
TOP3B-213ENST00000457179 FUCA2Q9BTY2 467 aa15.9■□□□□ 0.14
TOP3B-213ENST00000457179 SYCP1Q15431 976 aa15.89■□□□□ 0.13
TOP3B-213ENST00000457179 VPS53Q5VIR6 699 aa15.89■□□□□ 0.13
TOP3B-213ENST00000457179 CKAP2LQ8IYA6 745 aa15.89■□□□□ 0.13
TOP3B-213ENST00000457179 NOL10Q9BSC4 688 aaKnown RBP15.89■□□□□ 0.13
TOP3B-213ENST00000457179 PAXBP1Q9Y5B6 917 aa15.89■□□□□ 0.13
TOP3B-213ENST00000457179 HAND2P61296 217 aa15.89■□□□□ 0.13
TOP3B-213ENST00000457179 RABL6Q3YEC7 729 aaPredicted RBP15.89■□□□□ 0.13
TOP3B-213ENST00000457179 TPCN1Q9ULQ1 816 aa15.89■□□□□ 0.13
TOP3B-213ENST00000457179 LOC102724428A0A0B4J2F2 783 aa15.88■□□□□ 0.13
TOP3B-213ENST00000457179 SIK1P57059 783 aa15.88■□□□□ 0.13
TOP3B-213ENST00000457179 TTC39AQ5SRH9 613 aa15.88■□□□□ 0.13
TOP3B-213ENST00000457179 A0A0G2JLW4 131 aa15.88■□□□□ 0.13
TOP3B-213ENST00000457179 SLC27A2O14975 620 aa15.88■□□□□ 0.13
TOP3B-213ENST00000457179 CRKLP46109 303 aaKnown RBP15.88■□□□□ 0.13
TOP3B-213ENST00000457179 RBM6P78332 1123 aaKnown RBP15.88■□□□□ 0.13
TOP3B-213ENST00000457179 ZSCAN25Q6NSZ9 544 aa15.88■□□□□ 0.13
TOP3B-213ENST00000457179 GIGYF2Q6Y7W6 1299 aaKnown RBP15.88■□□□□ 0.13
TOP3B-213ENST00000457179 NLRP10Q86W26 655 aa15.88■□□□□ 0.13
TOP3B-213ENST00000457179 F13A1P00488 732 aa15.88■□□□□ 0.13
TOP3B-213ENST00000457179 IL15P40933 162 aaPredicted RBP15.88■□□□□ 0.13
TOP3B-213ENST00000457179 NECTIN1Q15223 517 aa15.88■□□□□ 0.13
TOP3B-213ENST00000457179 TEX13AQ9BXU3 409 aaPredicted RBP15.88■□□□□ 0.13
TOP3B-213ENST00000457179 MAP3K15Q6ZN16 1313 aa15.88■□□□□ 0.13
TOP3B-213ENST00000457179 C5P01031 1676 aa15.87■□□□□ 0.13
TOP3B-213ENST00000457179 HSP90B1P14625 803 aaKnown RBP15.87■□□□□ 0.13
TOP3B-213ENST00000457179 ST3GAL1Q11201 340 aa15.87■□□□□ 0.13
TOP3B-213ENST00000457179 TMX1Q9H3N1 280 aa15.87■□□□□ 0.13
TOP3B-213ENST00000457179 SEC31BQ9NQW1 1179 aa15.87■□□□□ 0.13
TOP3B-213ENST00000457179 PAG1Q9NWQ8 432 aa15.87■□□□□ 0.13
TOP3B-213ENST00000457179 TRMT1Q9NXH9 659 aaKnown RBP15.87■□□□□ 0.13
TOP3B-213ENST00000457179 NIP7Q9Y221 180 aaKnown RBP eCLIP15.87■□□□□ 0.13
TOP3B-213ENST00000457179 USP27XA6NNY8 438 aa15.87■□□□□ 0.13
TOP3B-213ENST00000457179 TULP2O00295 520 aa15.87■□□□□ 0.13
TOP3B-213ENST00000457179 SCARF1Q14162 830 aa15.87■□□□□ 0.13
TOP3B-213ENST00000457179 MEX3CQ5U5Q3 659 aaKnown RBP15.87■□□□□ 0.13
TOP3B-213ENST00000457179 FAM200AQ8TCP9 573 aa15.87■□□□□ 0.13
TOP3B-213ENST00000457179 USP42Q9H9J4 1324 aaKnown RBP15.87■□□□□ 0.13
TOP3B-213ENST00000457179 IDH1O75874 414 aaKnown RBP15.86■□□□□ 0.13
TOP3B-213ENST00000457179 SLC20A2Q08357 652 aa15.86■□□□□ 0.13
TOP3B-213ENST00000457179 RAB11FIP4Q86YS3 637 aa15.86■□□□□ 0.13
TOP3B-213ENST00000457179 TMEM87AQ8NBN3 555 aa15.86■□□□□ 0.13
TOP3B-213ENST00000457179 XAGE2Q96GT9 111 aa15.86■□□□□ 0.13
TOP3B-213ENST00000457179 ITPK1Q13572 414 aa15.86■□□□□ 0.13
TOP3B-213ENST00000457179 LARP1BQ659C4 914 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms