RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 ZNF316A6NFI3 1004 aaPredicted RBP11.21□□□□□ -0.61
PKP4-207ENST00000457109 EGFRP00533 1210 aa11.21□□□□□ -0.61
PKP4-207ENST00000457109 ITGA6P23229 1130 aa11.21□□□□□ -0.61
PKP4-207ENST00000457109 FKBP1BP68106 108 aa11.21□□□□□ -0.61
PKP4-207ENST00000457109 KIF23Q02241 960 aaPredicted RBP11.21□□□□□ -0.61
PKP4-207ENST00000457109 CCDC184Q52MB2 194 aa11.21□□□□□ -0.61
PKP4-207ENST00000457109 STRIP1Q5VSL9 837 aa11.21□□□□□ -0.61
PKP4-207ENST00000457109 TTLL5Q6EMB2 1281 aa11.21□□□□□ -0.61
PKP4-207ENST00000457109 DLK2Q6UY11 383 aa11.21□□□□□ -0.61
PKP4-207ENST00000457109 G2E3Q7L622 706 aa11.21□□□□□ -0.61
PKP4-207ENST00000457109 CDCA5Q96FF9 252 aa11.21□□□□□ -0.61
PKP4-207ENST00000457109 ANKRD36CQ5JPF3 1778 aa11.21□□□□□ -0.62
PKP4-207ENST00000457109 LTBP1Q14766 1721 aa11.21□□□□□ -0.62
PKP4-207ENST00000457109 MED23Q9ULK4 1368 aa11.2□□□□□ -0.62
PKP4-207ENST00000457109 ZNF804BA4D1E1 1349 aa11.2□□□□□ -0.62
PKP4-207ENST00000457109 EXOSC9Q06265 439 aaKnown RBP11.2□□□□□ -0.62
PKP4-207ENST00000457109 IFIT5Q13325 482 aaKnown RBP11.2□□□□□ -0.62
PKP4-207ENST00000457109 FAM9BQ8IZU0 186 aa11.2□□□□□ -0.62
PKP4-207ENST00000457109 PLA2G12BQ9BX93 195 aa11.2□□□□□ -0.62
PKP4-207ENST00000457109 C9orf78Q9NZ63 289 aaPredicted RBP11.2□□□□□ -0.62
PKP4-207ENST00000457109 PITPNM2Q9BZ72 1349 aa11.19□□□□□ -0.62
PKP4-207ENST00000457109 FANCIQ9NVI1 1328 aa11.19□□□□□ -0.62
PKP4-207ENST00000457109 VAMP4O75379 141 aa11.19□□□□□ -0.62
PKP4-207ENST00000457109 TRPA1O75762 1119 aa11.19□□□□□ -0.62
PKP4-207ENST00000457109 DGKZQ13574 1117 aa11.19□□□□□ -0.62
PKP4-207ENST00000457109 CCDC57Q2TAC2 916 aa11.19□□□□□ -0.62
PKP4-207ENST00000457109 SAGE1Q9NXZ1 904 aa11.19□□□□□ -0.62
PKP4-207ENST00000457109 CSF1RP07333 972 aa11.18□□□□□ -0.62
PKP4-207ENST00000457109 GTF2IP78347 998 aa11.18□□□□□ -0.62
PKP4-207ENST00000457109 CHRNDQ07001 517 aa11.18□□□□□ -0.62
PKP4-207ENST00000457109 FAM161AQ3B820 660 aa11.18□□□□□ -0.62
PKP4-207ENST00000457109 DACT2Q5SW24 774 aa11.18□□□□□ -0.62
PKP4-207ENST00000457109 ARMC9Q7Z3E5 817 aa11.18□□□□□ -0.62
PKP4-207ENST00000457109 GMLQ99445 158 aa11.18□□□□□ -0.62
PKP4-207ENST00000457109 ASTN2O75129 1339 aaPredicted RBP11.17□□□□□ -0.62
PKP4-207ENST00000457109 DUOX1Q9NRD9 1551 aa11.17□□□□□ -0.62
PKP4-207ENST00000457109 MYO1BO43795 1136 aa11.17□□□□□ -0.62
PKP4-207ENST00000457109 PLIN1O60240 522 aa11.17□□□□□ -0.62
PKP4-207ENST00000457109 SLC10A3P09131 477 aa11.17□□□□□ -0.62
PKP4-207ENST00000457109 DLGAP5Q15398 846 aa11.17□□□□□ -0.62
PKP4-207ENST00000457109 NBPF9Q3BBW0 867 aa11.17□□□□□ -0.62
PKP4-207ENST00000457109 SLC4A10Q6U841 1118 aa11.17□□□□□ -0.62
PKP4-207ENST00000457109 LDHAL6AQ6ZMR3 332 aa11.17□□□□□ -0.62
PKP4-207ENST00000457109 ZNF804AQ7Z570 1209 aa11.17□□□□□ -0.62
PKP4-207ENST00000457109 APOBEC3FQ8IUX4 373 aaKnown RBP11.17□□□□□ -0.62
PKP4-207ENST00000457109 KIAA0825Q8IV33 1275 aa11.17□□□□□ -0.62
PKP4-207ENST00000457109 MCOLN1Q9GZU1 580 aa11.17□□□□□ -0.62
PKP4-207ENST00000457109 CNNM1Q9NRU3 951 aa11.17□□□□□ -0.62
PKP4-207ENST00000457109 RNF186Q9NXI6 227 aa11.17□□□□□ -0.62
PKP4-207ENST00000457109 WTIPA6NIX2 430 aaPredicted RBP11.16□□□□□ -0.62
PKP4-207ENST00000457109 FAM155AB1AL88 458 aaPredicted RBP11.16□□□□□ -0.62
PKP4-207ENST00000457109 MLLT1Q03111 559 aaPredicted RBP11.16□□□□□ -0.62
PKP4-207ENST00000457109 LMBR1LQ6UX01 489 aa11.16□□□□□ -0.62
PKP4-207ENST00000457109 CSRNP1Q96S65 589 aa11.16□□□□□ -0.62
PKP4-207ENST00000457109 ZIC5Q96T25 663 aa11.16□□□□□ -0.62
PKP4-207ENST00000457109 MXD3Q9BW11 206 aa11.16□□□□□ -0.62
PKP4-207ENST00000457109 CD209Q9NNX6 404 aa11.16□□□□□ -0.62
PKP4-207ENST00000457109 F6X3S4 739 aa11.15□□□□□ -0.62
PKP4-207ENST00000457109 UBE2Q2LH0YL09 131 aa11.15□□□□□ -0.62
PKP4-207ENST00000457109 WNT10BO00744 389 aa11.15□□□□□ -0.62
PKP4-207ENST00000457109 TAF5LO75529 589 aa11.15□□□□□ -0.62
PKP4-207ENST00000457109 RBM5P52756 815 aaKnown RBP eCLIP11.15□□□□□ -0.62
PKP4-207ENST00000457109 BEND3Q5T5X7 828 aa11.15□□□□□ -0.62
PKP4-207ENST00000457109 PRAMEF18Q5VWM3 479 aa11.15□□□□□ -0.62
PKP4-207ENST00000457109 TXNRD3Q86VQ6 643 aa11.15□□□□□ -0.62
PKP4-207ENST00000457109 HELBQ8NG08 1087 aaPredicted RBP11.15□□□□□ -0.62
PKP4-207ENST00000457109 SRCIN1Q9C0H9 1055 aa11.15□□□□□ -0.62
PKP4-207ENST00000457109 LAMB2P55268 1798 aa11.15□□□□□ -0.62
PKP4-207ENST00000457109 GRM8O00222 908 aa11.14□□□□□ -0.63
PKP4-207ENST00000457109 ALDH1L1O75891 902 aa11.14□□□□□ -0.63
PKP4-207ENST00000457109 SASH1O94885 1247 aa11.14□□□□□ -0.63
PKP4-207ENST00000457109 CASP7P55210 303 aa11.14□□□□□ -0.63
PKP4-207ENST00000457109 SREBF2Q12772 1141 aa11.14□□□□□ -0.63
PKP4-207ENST00000457109 SUPT20HL1Q3ZLR7 823 aa11.14□□□□□ -0.63
PKP4-207ENST00000457109 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.14□□□□□ -0.63
PKP4-207ENST00000457109 SCAF8Q9UPN6 1271 aaKnown RBP11.14□□□□□ -0.63
PKP4-207ENST00000457109 ZNF609O15014 1411 aa11.14□□□□□ -0.63
PKP4-207ENST00000457109 DDX60Q8IY21 1712 aaKnown RBP11.14□□□□□ -0.63
PKP4-207ENST00000457109 LRRC37AA6NMS7 1700 aa11.13□□□□□ -0.63
PKP4-207ENST00000457109 F8W031 263 aaPredicted RBP11.13□□□□□ -0.63
PKP4-207ENST00000457109 PPP1R12BO60237 982 aaPredicted RBP11.13□□□□□ -0.63
PKP4-207ENST00000457109 FRAT2O75474 233 aaPredicted RBP11.13□□□□□ -0.63
PKP4-207ENST00000457109 FOXO4P98177 505 aa11.13□□□□□ -0.63
PKP4-207ENST00000457109 PRKG1Q13976 671 aa11.13□□□□□ -0.63
PKP4-207ENST00000457109 VPS37DQ86XT2 251 aa11.13□□□□□ -0.63
PKP4-207ENST00000457109 RASAL3Q86YV0 1011 aa11.13□□□□□ -0.63
PKP4-207ENST00000457109 SLC10A4Q96EP9 437 aa11.13□□□□□ -0.63
PKP4-207ENST00000457109 TAF1P21675 1872 aa11.12□□□□□ -0.63
PKP4-207ENST00000457109 TRPM7Q96QT4 1865 aa11.12□□□□□ -0.63
PKP4-207ENST00000457109 C15orf52Q6ZUT6 534 aaKnown RBP11.12□□□□□ -0.63
PKP4-207ENST00000457109 MOB2Q70IA6 237 aa11.12□□□□□ -0.63
PKP4-207ENST00000457109 DEFB129Q9H1M3 183 aa11.12□□□□□ -0.63
PKP4-207ENST00000457109 IL1R1P14778 569 aa11.11□□□□□ -0.63
PKP4-207ENST00000457109 KLRK1P26718 216 aa11.11□□□□□ -0.63
PKP4-207ENST00000457109 HIBADHP31937 336 aaKnown RBP11.11□□□□□ -0.63
PKP4-207ENST00000457109 INHBEP58166 350 aa11.11□□□□□ -0.63
PKP4-207ENST00000457109 FKBP1AP62942 108 aaKnown RBP11.11□□□□□ -0.63
PKP4-207ENST00000457109 MKRN3Q13064 507 aaKnown RBP11.11□□□□□ -0.63
PKP4-207ENST00000457109 PKN2Q16513 984 aaKnown RBP11.11□□□□□ -0.63
PKP4-207ENST00000457109 CFAP100Q494V2 611 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms