RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 MAST3O60307 1309 aa23.7■■□□□ 1.38
CSPG5-203ENST00000456150 PCCAP05165 728 aaPredicted RBP23.69■■□□□ 1.38
CSPG5-203ENST00000456150 SCRN1Q12765 414 aa23.69■■□□□ 1.38
CSPG5-203ENST00000456150 MAP3K11Q16584 847 aa23.69■■□□□ 1.38
CSPG5-203ENST00000456150 LEO1Q8WVC0 666 aaPredicted RBP23.69■■□□□ 1.38
CSPG5-203ENST00000456150 CHMP4CQ96CF2 233 aa23.69■■□□□ 1.38
CSPG5-203ENST00000456150 PLA2G12BQ9BX93 195 aa23.69■■□□□ 1.38
CSPG5-203ENST00000456150 AGXT2Q9BYV1 514 aa23.69■■□□□ 1.38
CSPG5-203ENST00000456150 PUS3Q9BZE2 481 aaKnown RBP23.69■■□□□ 1.38
CSPG5-203ENST00000456150 RESTQ13127 1097 aa23.69■■□□□ 1.38
CSPG5-203ENST00000456150 DDB1Q16531 1140 aa23.69■■□□□ 1.38
CSPG5-203ENST00000456150 CDCA7Q9BWT1 371 aaPredicted RBP23.69■■□□□ 1.38
CSPG5-203ENST00000456150 DDX19AQ9NUU7 478 aaKnown RBP23.69■■□□□ 1.38
CSPG5-203ENST00000456150 HMGN5P82970 282 aaKnown RBP23.68■■□□□ 1.38
CSPG5-203ENST00000456150 EXOSC10Q01780 885 aaKnown RBP23.68■■□□□ 1.38
CSPG5-203ENST00000456150 BARGINQ6ZT62 677 aa23.68■■□□□ 1.38
CSPG5-203ENST00000456150 USP21Q9UK80 565 aa23.68■■□□□ 1.38
CSPG5-203ENST00000456150 VPS72Q15906 364 aa23.68■■□□□ 1.38
CSPG5-203ENST00000456150 FAM98CQ17RN3 349 aaKnown RBP23.68■■□□□ 1.38
CSPG5-203ENST00000456150 TTC39AQ5SRH9 613 aa23.68■■□□□ 1.38
CSPG5-203ENST00000456150 GORABQ5T7V8 394 aa23.68■■□□□ 1.38
CSPG5-203ENST00000456150 PIGBQ92521 554 aa23.68■■□□□ 1.38
CSPG5-203ENST00000456150 LRRC2Q9BYS8 371 aa23.68■■□□□ 1.38
CSPG5-203ENST00000456150 MYH15Q9Y2K3 1946 aa23.67■■□□□ 1.38
CSPG5-203ENST00000456150 E7EWF7 191 aa23.67■■□□□ 1.38
CSPG5-203ENST00000456150 ZFYP08048 801 aaPredicted RBP23.67■■□□□ 1.38
CSPG5-203ENST00000456150 LIG1P18858 919 aa23.67■■□□□ 1.38
CSPG5-203ENST00000456150 TFIP11Q9UBB9 837 aaKnown RBP23.67■■□□□ 1.38
CSPG5-203ENST00000456150 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.67■■□□□ 1.38
CSPG5-203ENST00000456150 ABCC12Q96J65 1359 aa23.67■■□□□ 1.38
CSPG5-203ENST00000456150 KIAA2012Q0VF49 1180 aa23.66■■□□□ 1.38
CSPG5-203ENST00000456150 TAF7LQ5H9L4 462 aa23.66■■□□□ 1.38
CSPG5-203ENST00000456150 MEX3CQ5U5Q3 659 aaKnown RBP23.66■■□□□ 1.38
CSPG5-203ENST00000456150 CFAP45Q9UL16 551 aa23.66■■□□□ 1.38
CSPG5-203ENST00000456150 ZNF330Q9Y3S2 320 aaPredicted RBP23.66■■□□□ 1.38
CSPG5-203ENST00000456150 ITGB4P16144 1822 aa23.66■■□□□ 1.38
CSPG5-203ENST00000456150 STARD3NLO95772 234 aa23.66■■□□□ 1.38
CSPG5-203ENST00000456150 SLFNL1Q499Z3 407 aa23.66■■□□□ 1.38
CSPG5-203ENST00000456150 NAA16Q6N069 864 aaPredicted RBP23.66■■□□□ 1.38
CSPG5-203ENST00000456150 ZBTB38Q8NAP3 1195 aaPredicted RBP23.66■■□□□ 1.38
CSPG5-203ENST00000456150 DDX11Q96FC9 970 aa23.66■■□□□ 1.38
CSPG5-203ENST00000456150 MARCH10Q8NA82 808 aaPredicted RBP23.65■■□□□ 1.38
CSPG5-203ENST00000456150 NSUN7Q8NE18 718 aaKnown RBP23.65■■□□□ 1.38
CSPG5-203ENST00000456150 TNMDQ9H2S6 317 aa23.65■■□□□ 1.38
CSPG5-203ENST00000456150 CTNNA3Q9UI47 895 aa23.65■■□□□ 1.38
CSPG5-203ENST00000456150 FKBP4Q02790 459 aaKnown RBP eCLIP23.64■■□□□ 1.38
CSPG5-203ENST00000456150 XAGE2Q96GT9 111 aa23.64■■□□□ 1.38
CSPG5-203ENST00000456150 DACT1Q9NYF0 836 aa23.64■■□□□ 1.38
CSPG5-203ENST00000456150 ASAP1Q9ULH1 1129 aa23.64■■□□□ 1.38
CSPG5-203ENST00000456150 M0R2C6 588 aa23.64■■□□□ 1.37
CSPG5-203ENST00000456150 CSF1RP07333 972 aa23.64■■□□□ 1.37
CSPG5-203ENST00000456150 APOBRQ0VD83 1088 aa23.64■■□□□ 1.37
CSPG5-203ENST00000456150 IFIT5Q13325 482 aaKnown RBP23.64■■□□□ 1.37
CSPG5-203ENST00000456150 DNAJC10Q8IXB1 793 aa23.64■■□□□ 1.37
CSPG5-203ENST00000456150 MYH7P12883 1935 aa23.63■■□□□ 1.37
CSPG5-203ENST00000456150 FAM200AQ8TCP9 573 aa23.63■■□□□ 1.37
CSPG5-203ENST00000456150 ZNF274Q96GC6 653 aaPredicted RBP23.63■■□□□ 1.37
CSPG5-203ENST00000456150 MAP3K15Q6ZN16 1313 aa23.63■■□□□ 1.37
CSPG5-203ENST00000456150 CDHR2Q9BYE9 1310 aa23.63■■□□□ 1.37
CSPG5-203ENST00000456150 PTPDC1A2A3K4 754 aa23.63■■□□□ 1.37
CSPG5-203ENST00000456150 FBXL16Q8N461 479 aa23.63■■□□□ 1.37
CSPG5-203ENST00000456150 BICD2Q8TD16 824 aa23.63■■□□□ 1.37
CSPG5-203ENST00000456150 SYTL4Q96C24 671 aaPredicted RBP23.63■■□□□ 1.37
CSPG5-203ENST00000456150 FAM89AQ96GI7 184 aa23.63■■□□□ 1.37
CSPG5-203ENST00000456150 CLSTN2Q9H4D0 955 aa23.63■■□□□ 1.37
CSPG5-203ENST00000456150 DOT1LQ8TEK3 1739 aa23.62■■□□□ 1.37
CSPG5-203ENST00000456150 TYRO3Q06418 890 aa23.62■■□□□ 1.37
CSPG5-203ENST00000456150 RBM43Q6ZSC3 357 aaKnown RBP23.62■■□□□ 1.37
CSPG5-203ENST00000456150 OSBP2Q969R2 916 aa23.62■■□□□ 1.37
CSPG5-203ENST00000456150 ADORA1P30542 326 aa23.61■■□□□ 1.37
CSPG5-203ENST00000456150 HSP90AB3PQ58FF7 597 aa23.61■■□□□ 1.37
CSPG5-203ENST00000456150 GIGYF2Q6Y7W6 1299 aaKnown RBP23.61■■□□□ 1.37
CSPG5-203ENST00000456150 ANKRD36CQ5JPF3 1778 aa23.61■■□□□ 1.37
CSPG5-203ENST00000456150 BCL9O00512 1426 aa23.61■■□□□ 1.37
CSPG5-203ENST00000456150 CAMK4Q16566 473 aa23.61■■□□□ 1.37
CSPG5-203ENST00000456150 R3HCC1Q9Y3T6 440 aaKnown RBP23.61■■□□□ 1.37
CSPG5-203ENST00000456150 AFF2P51816 1311 aa23.6■■□□□ 1.37
CSPG5-203ENST00000456150 CTDNEP1O95476 244 aa23.6■■□□□ 1.37
CSPG5-203ENST00000456150 WASHC4Q2M389 1173 aa23.6■■□□□ 1.37
CSPG5-203ENST00000456150 ATL3Q6DD88 541 aa23.6■■□□□ 1.37
CSPG5-203ENST00000456150 PGBD1Q96JS3 809 aa23.6■■□□□ 1.37
CSPG5-203ENST00000456150 MRVI1Q9Y6F6 885 aa23.6■■□□□ 1.37
CSPG5-203ENST00000456150 MYH3P11055 1940 aa23.6■■□□□ 1.37
CSPG5-203ENST00000456150 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.6■■□□□ 1.37
CSPG5-203ENST00000456150 SALL1Q9NSC2 1324 aa23.6■■□□□ 1.37
CSPG5-203ENST00000456150 PLCB2Q00722 1185 aa23.6■■□□□ 1.37
CSPG5-203ENST00000456150 IMMTQ16891 758 aaKnown RBP23.6■■□□□ 1.37
CSPG5-203ENST00000456150 APPBP2Q92624 585 aa23.6■■□□□ 1.37
CSPG5-203ENST00000456150 ACSBG1Q96GR2 724 aa23.6■■□□□ 1.37
CSPG5-203ENST00000456150 TPM3P06753 285 aa23.59■■□□□ 1.37
CSPG5-203ENST00000456150 PDIA3P30101 505 aaKnown RBP23.59■■□□□ 1.37
CSPG5-203ENST00000456150 CCT2P78371 535 aaKnown RBP23.58■■□□□ 1.37
CSPG5-203ENST00000456150 RIC1Q4ADV7 1423 aa23.58■■□□□ 1.37
CSPG5-203ENST00000456150 A0A0G2JLW4 131 aa23.58■■□□□ 1.36
CSPG5-203ENST00000456150 EVCP57679 992 aa23.58■■□□□ 1.36
CSPG5-203ENST00000456150 ATP2B3Q16720 1220 aa23.58■■□□□ 1.36
CSPG5-203ENST00000456150 CCDC85AQ96PX6 553 aaPredicted RBP23.58■■□□□ 1.36
CSPG5-203ENST00000456150 NAP1L2Q9ULW6 460 aaPredicted RBP23.58■■□□□ 1.36
CSPG5-203ENST00000456150 KAT6BQ8WYB5 2073 aa23.57■■□□□ 1.36
CSPG5-203ENST00000456150 METTL24Q5JXM2 366 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms