RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 ANKRD31Q8N7Z5 1873 aa7.67□□□□□ -1.18
SBDSP1-204ENST00000453858 SRGNP10124 158 aa7.67□□□□□ -1.18
SBDSP1-204ENST00000453858 FBLN1P23142 703 aa7.67□□□□□ -1.18
SBDSP1-204ENST00000453858 ZNF157P51786 506 aaPredicted RBP7.67□□□□□ -1.18
SBDSP1-204ENST00000453858 MAP3K12Q12852 859 aa7.67□□□□□ -1.18
SBDSP1-204ENST00000453858 STYK1Q6J9G0 422 aa7.67□□□□□ -1.18
SBDSP1-204ENST00000453858 CNKSR1Q969H4 720 aa7.67□□□□□ -1.18
SBDSP1-204ENST00000453858 KTN1Q86UP2 1357 aaKnown RBP7.67□□□□□ -1.18
SBDSP1-204ENST00000453858 COL4A5P29400 1685 aa7.67□□□□□ -1.18
SBDSP1-204ENST00000453858 RNF40O75150 1001 aa7.66□□□□□ -1.18
SBDSP1-204ENST00000453858 CFHP08603 1231 aa7.66□□□□□ -1.18
SBDSP1-204ENST00000453858 PDE6BP35913 854 aa7.66□□□□□ -1.18
SBDSP1-204ENST00000453858 MYSM1Q5VVJ2 828 aa7.66□□□□□ -1.18
SBDSP1-204ENST00000453858 OLFM4Q6UX06 510 aa7.66□□□□□ -1.18
SBDSP1-204ENST00000453858 CDC37L1Q7L3B6 337 aa7.66□□□□□ -1.18
SBDSP1-204ENST00000453858 DCAF11Q8TEB1 546 aa7.66□□□□□ -1.18
SBDSP1-204ENST00000453858 CFHR5Q9BXR6 569 aa7.66□□□□□ -1.18
SBDSP1-204ENST00000453858 ZNF408Q9H9D4 720 aa7.66□□□□□ -1.18
SBDSP1-204ENST00000453858 ADARB2Q9NS39 739 aaKnown RBP7.66□□□□□ -1.18
SBDSP1-204ENST00000453858 NARFQ9UHQ1 456 aa7.66□□□□□ -1.18
SBDSP1-204ENST00000453858 GTF3C3Q9Y5Q9 886 aa7.66□□□□□ -1.18
SBDSP1-204ENST00000453858 SPTLC1O15269 473 aa7.65□□□□□ -1.18
SBDSP1-204ENST00000453858 ACTN4O43707 911 aaKnown RBP7.65□□□□□ -1.18
SBDSP1-204ENST00000453858 ZPR1O75312 459 aa7.65□□□□□ -1.18
SBDSP1-204ENST00000453858 COL11A2P13942 1736 aaPredicted RBP7.65□□□□□ -1.18
SBDSP1-204ENST00000453858 LMOD1P29536 600 aaPredicted RBP7.65□□□□□ -1.18
SBDSP1-204ENST00000453858 IARSP41252 1262 aaKnown RBP7.65□□□□□ -1.18
SBDSP1-204ENST00000453858 DNAH12Q6ZR08 3092 aa7.65□□□□□ -1.18
SBDSP1-204ENST00000453858 MON2Q7Z3U7 1717 aa7.65□□□□□ -1.18
SBDSP1-204ENST00000453858 GPRC5DQ9NZD1 345 aa7.65□□□□□ -1.18
SBDSP1-204ENST00000453858 GJA3Q9Y6H8 435 aa7.65□□□□□ -1.18
SBDSP1-204ENST00000453858 SNED1Q8TER0 1413 aa7.64□□□□□ -1.19
SBDSP1-204ENST00000453858 CENPJQ9HC77 1338 aaPredicted RBP7.64□□□□□ -1.19
SBDSP1-204ENST00000453858 WTIPA6NIX2 430 aaPredicted RBP7.64□□□□□ -1.19
SBDSP1-204ENST00000453858 FKTNO75072 461 aa7.64□□□□□ -1.19
SBDSP1-204ENST00000453858 TM4SF4P48230 202 aa7.64□□□□□ -1.19
SBDSP1-204ENST00000453858 CLK2P49760 499 aaKnown RBP7.64□□□□□ -1.19
SBDSP1-204ENST00000453858 CCDC93Q567U6 631 aa7.64□□□□□ -1.19
SBDSP1-204ENST00000453858 OTOP1Q7RTM1 612 aa7.64□□□□□ -1.19
SBDSP1-204ENST00000453858 RIC3Q7Z5B4 369 aa7.64□□□□□ -1.19
SBDSP1-204ENST00000453858 TRANK1O15050 2925 aa7.64□□□□□ -1.19
SBDSP1-204ENST00000453858 SOS1Q07889 1333 aaPredicted RBP7.63□□□□□ -1.19
SBDSP1-204ENST00000453858 PRR5LQ6MZQ0 368 aa7.63□□□□□ -1.19
SBDSP1-204ENST00000453858 UBE2Q1Q7Z7E8 422 aa7.63□□□□□ -1.19
SBDSP1-204ENST00000453858 USP48Q86UV5 1035 aa7.63□□□□□ -1.19
SBDSP1-204ENST00000453858 ZNF333Q96JL9 665 aa7.63□□□□□ -1.19
SBDSP1-204ENST00000453858 GBA2Q9HCG7 927 aaPredicted RBP7.63□□□□□ -1.19
SBDSP1-204ENST00000453858 PTPN22Q9Y2R2 807 aa7.63□□□□□ -1.19
SBDSP1-204ENST00000453858 WDR87Q6ZQQ6 2873 aa7.63□□□□□ -1.19
SBDSP1-204ENST00000453858 ZBTB7BO15156 539 aaPredicted RBP7.62□□□□□ -1.19
SBDSP1-204ENST00000453858 HOXA2O43364 376 aa7.62□□□□□ -1.19
SBDSP1-204ENST00000453858 BCAMP50895 628 aa7.62□□□□□ -1.19
SBDSP1-204ENST00000453858 RSBN1LQ6PCB5 846 aaPredicted RBP7.62□□□□□ -1.19
SBDSP1-204ENST00000453858 RTKN2Q8IZC4 609 aa7.62□□□□□ -1.19
SBDSP1-204ENST00000453858 MASTLQ96GX5 879 aa7.62□□□□□ -1.19
SBDSP1-204ENST00000453858 POLR3EQ9NVU0 708 aa7.62□□□□□ -1.19
SBDSP1-204ENST00000453858 BAHCC1Q9P281 2608 aa7.62□□□□□ -1.19
SBDSP1-204ENST00000453858 BCORQ6W2J9 1755 aa7.61□□□□□ -1.19
SBDSP1-204ENST00000453858 REV3LO60673 3130 aa7.61□□□□□ -1.19
SBDSP1-204ENST00000453858 UNC79Q9P2D8 2635 aa7.61□□□□□ -1.19
SBDSP1-204ENST00000453858 LOC105371045A0A1W2PR82 267 aa7.61□□□□□ -1.19
SBDSP1-204ENST00000453858 KLRG2A4D1S0 409 aaPredicted RBP7.61□□□□□ -1.19
SBDSP1-204ENST00000453858 MOXD2PA6NHM9 499 aa7.61□□□□□ -1.19
SBDSP1-204ENST00000453858 TNFRSF10AO00220 468 aa7.61□□□□□ -1.19
SBDSP1-204ENST00000453858 PHKG2P15735 406 aa7.61□□□□□ -1.19
SBDSP1-204ENST00000453858 EIF6P56537 245 aaKnown RBP7.61□□□□□ -1.19
SBDSP1-204ENST00000453858 CAP1Q01518 475 aa7.61□□□□□ -1.19
SBDSP1-204ENST00000453858 RASAL3Q86YV0 1011 aa7.61□□□□□ -1.19
SBDSP1-204ENST00000453858 C2orf69Q8N8R5 385 aa7.61□□□□□ -1.19
SBDSP1-204ENST00000453858 GUCD1Q96NT3 240 aa7.61□□□□□ -1.19
SBDSP1-204ENST00000453858 PSMD1Q99460 953 aa7.61□□□□□ -1.19
SBDSP1-204ENST00000453858 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.61□□□□□ -1.19
SBDSP1-204ENST00000453858 TRIM17Q9Y577 477 aa7.61□□□□□ -1.19
SBDSP1-204ENST00000453858 CFAP47Q6ZTR5 3102 aa7.61□□□□□ -1.19
SBDSP1-204ENST00000453858 RPTORQ8N122 1335 aa7.6□□□□□ -1.19
SBDSP1-204ENST00000453858 SPDYE5A6NIY4 337 aa7.6□□□□□ -1.19
SBDSP1-204ENST00000453858 ERVV-2B6SEH9 535 aa7.6□□□□□ -1.19
SBDSP1-204ENST00000453858 PPEF1O14829 653 aaPredicted RBP7.6□□□□□ -1.19
SBDSP1-204ENST00000453858 FDX1P10109 184 aa7.6□□□□□ -1.19
SBDSP1-204ENST00000453858 AMPHP49418 695 aa7.6□□□□□ -1.19
SBDSP1-204ENST00000453858 FUT2Q10981 343 aa7.6□□□□□ -1.19
SBDSP1-204ENST00000453858 Q3C1V9 767 aa7.6□□□□□ -1.19
SBDSP1-204ENST00000453858 LRIT3Q3SXY7 679 aa7.6□□□□□ -1.19
SBDSP1-204ENST00000453858 PPP2R2DQ66LE6 453 aa7.6□□□□□ -1.19
SBDSP1-204ENST00000453858 JDP2Q8WYK2 163 aa7.6□□□□□ -1.19
SBDSP1-204ENST00000453858 DPF3Q92784 378 aa7.6□□□□□ -1.19
SBDSP1-204ENST00000453858 STAP2Q9UGK3 403 aa7.6□□□□□ -1.19
SBDSP1-204ENST00000453858 ARFGEF2Q9Y6D5 1785 aa7.6□□□□□ -1.19
SBDSP1-204ENST00000453858 DCHS1Q96JQ0 3298 aa7.6□□□□□ -1.19
SBDSP1-204ENST00000453858 SPTBN4Q9H254 2564 aa7.6□□□□□ -1.19
SBDSP1-204ENST00000453858 EVC2Q86UK5 1308 aa7.59□□□□□ -1.19
SBDSP1-204ENST00000453858 BMP8BP34820 402 aa7.59□□□□□ -1.19
SBDSP1-204ENST00000453858 TRPM4Q8TD43 1214 aa7.59□□□□□ -1.19
SBDSP1-204ENST00000453858 SYMPKQ92797 1274 aaKnown RBP7.59□□□□□ -1.19
SBDSP1-204ENST00000453858 SALL2Q9Y467 1007 aaPredicted RBP7.59□□□□□ -1.19
SBDSP1-204ENST00000453858 NCAPD2Q15021 1401 aa7.59□□□□□ -1.19
SBDSP1-204ENST00000453858 EPG5Q9HCE0 2579 aa7.58□□□□□ -1.2
SBDSP1-204ENST00000453858 TMEM265A0A087WTH1 108 aa7.58□□□□□ -1.2
SBDSP1-204ENST00000453858 PTCD1O75127 700 aaKnown RBP7.58□□□□□ -1.2
SBDSP1-204ENST00000453858 NR1I2O75469 434 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms