RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 SLC4A8Q2Y0W8 1093 aa9.38□□□□□ -0.91
BRCC3-208ENST00000453705 CCDC174Q6PII3 467 aa9.38□□□□□ -0.91
BRCC3-208ENST00000453705 CERKQ8TCT0 537 aa9.38□□□□□ -0.91
BRCC3-208ENST00000453705 PCDHGB7Q9Y5F8 929 aa9.38□□□□□ -0.91
BRCC3-208ENST00000453705 KIF16BQ96L93 1317 aa9.37□□□□□ -0.91
BRCC3-208ENST00000453705 RGPD5Q99666 1765 aa9.37□□□□□ -0.91
BRCC3-208ENST00000453705 SCN11AQ9UI33 1791 aa9.37□□□□□ -0.91
BRCC3-208ENST00000453705 ATF3P18847 181 aa9.37□□□□□ -0.91
BRCC3-208ENST00000453705 GPSM2P81274 684 aa9.37□□□□□ -0.91
BRCC3-208ENST00000453705 KCNH5Q8NCM2 988 aa9.37□□□□□ -0.91
BRCC3-208ENST00000453705 RBM33Q96EV2 1170 aaKnown RBP9.37□□□□□ -0.91
BRCC3-208ENST00000453705 IFT122Q9HBG6 1241 aa9.37□□□□□ -0.91
BRCC3-208ENST00000453705 ZNF335Q9H4Z2 1342 aaPredicted RBP9.37□□□□□ -0.91
BRCC3-208ENST00000453705 GRXCR2A6NFK2 248 aa9.37□□□□□ -0.91
BRCC3-208ENST00000453705 SSTR3P32745 418 aaPredicted RBP9.37□□□□□ -0.91
BRCC3-208ENST00000453705 CLK2P49760 499 aaKnown RBP9.37□□□□□ -0.91
BRCC3-208ENST00000453705 L1TD1Q5T7N2 865 aaKnown RBP9.37□□□□□ -0.91
BRCC3-208ENST00000453705 CCDC70Q6NSX1 233 aa9.37□□□□□ -0.91
BRCC3-208ENST00000453705 BANK1Q8NDB2 785 aa9.37□□□□□ -0.91
BRCC3-208ENST00000453705 CCSER2Q9H7U1 834 aa9.37□□□□□ -0.91
BRCC3-208ENST00000453705 IPO8O15397 1037 aaKnown RBP9.36□□□□□ -0.91
BRCC3-208ENST00000453705 FANCCQ00597 558 aa9.36□□□□□ -0.91
BRCC3-208ENST00000453705 POU5F1BQ06416 359 aa9.36□□□□□ -0.91
BRCC3-208ENST00000453705 PPP4R4Q6NUP7 873 aa9.36□□□□□ -0.91
BRCC3-208ENST00000453705 PRR7Q8TB68 274 aa9.36□□□□□ -0.91
BRCC3-208ENST00000453705 IP6K2Q9UHH9 426 aa9.36□□□□□ -0.91
BRCC3-208ENST00000453705 MNX1P50219 401 aaPredicted RBP9.36□□□□□ -0.91
BRCC3-208ENST00000453705 MFSD10Q14728 455 aa9.36□□□□□ -0.91
BRCC3-208ENST00000453705 E2F5Q15329 346 aa9.36□□□□□ -0.91
BRCC3-208ENST00000453705 NBPF10Q6P3W6 841 aaKnown RBP9.36□□□□□ -0.91
BRCC3-208ENST00000453705 ENAMQ9NRM1 1142 aa9.36□□□□□ -0.91
BRCC3-208ENST00000453705 COL22A1Q8NFW1 1626 aaPredicted RBP9.35□□□□□ -0.91
BRCC3-208ENST00000453705 IBTKQ9P2D0 1353 aaPredicted RBP9.35□□□□□ -0.91
BRCC3-208ENST00000453705 SLC26A4O43511 780 aa9.35□□□□□ -0.91
BRCC3-208ENST00000453705 PAK3O75914 559 aaPredicted RBP9.35□□□□□ -0.91
BRCC3-208ENST00000453705 RBP3P10745 1247 aa9.35□□□□□ -0.91
BRCC3-208ENST00000453705 CCDC92Q53HC0 331 aaPredicted RBP9.35□□□□□ -0.91
BRCC3-208ENST00000453705 PXDNLA1KZ92 1463 aa9.35□□□□□ -0.91
BRCC3-208ENST00000453705 VIL1P09327 827 aaKnown RBP9.35□□□□□ -0.91
BRCC3-208ENST00000453705 HOXC9P31274 260 aa9.35□□□□□ -0.91
BRCC3-208ENST00000453705 LARP1BQ659C4 914 aaKnown RBP9.35□□□□□ -0.91
BRCC3-208ENST00000453705 JAMLQ86YT9 394 aa9.35□□□□□ -0.91
BRCC3-208ENST00000453705 PRPF38AQ8NAV1 312 aaKnown RBP9.35□□□□□ -0.91
BRCC3-208ENST00000453705 IP6K1Q92551 441 aa9.35□□□□□ -0.91
BRCC3-208ENST00000453705 PHACTR3Q96KR7 559 aa9.35□□□□□ -0.91
BRCC3-208ENST00000453705 CWC25Q9NXE8 425 aaPredicted RBP9.35□□□□□ -0.91
BRCC3-208ENST00000453705 FLT3P36888 993 aa9.34□□□□□ -0.91
BRCC3-208ENST00000453705 PSMD2Q13200 908 aa9.34□□□□□ -0.91
BRCC3-208ENST00000453705 ESCO1Q5FWF5 840 aa9.34□□□□□ -0.91
BRCC3-208ENST00000453705 C20orf194Q5TEA3 1177 aa9.34□□□□□ -0.91
BRCC3-208ENST00000453705 NUTM2GQ5VZR2 741 aa9.34□□□□□ -0.91
BRCC3-208ENST00000453705 ANP32BQ92688 251 aaKnown RBP9.34□□□□□ -0.91
BRCC3-208ENST00000453705 NELL1Q92832 810 aa9.34□□□□□ -0.91
BRCC3-208ENST00000453705 FAM212AQ96EL1 285 aa9.34□□□□□ -0.91
BRCC3-208ENST00000453705 RNPC3Q96LT9 517 aaKnown RBP9.34□□□□□ -0.91
BRCC3-208ENST00000453705 CD248Q9HCU0 757 aa9.34□□□□□ -0.91
BRCC3-208ENST00000453705 SYNPO2Q9UMS6 1093 aa9.34□□□□□ -0.91
BRCC3-208ENST00000453705 MRC1P22897 1456 aa9.34□□□□□ -0.91
BRCC3-208ENST00000453705 ERICH4A6NGS2 130 aa9.34□□□□□ -0.91
BRCC3-208ENST00000453705 CHL1O00533 1208 aa9.34□□□□□ -0.91
BRCC3-208ENST00000453705 CBFA2T2O43439 604 aa9.34□□□□□ -0.91
BRCC3-208ENST00000453705 BCAR3O75815 825 aa9.34□□□□□ -0.91
BRCC3-208ENST00000453705 MAPK1P28482 360 aa9.34□□□□□ -0.91
BRCC3-208ENST00000453705 CDKN1CP49918 316 aaPredicted RBP9.34□□□□□ -0.91
BRCC3-208ENST00000453705 RRS1Q15050 365 aaKnown RBP9.34□□□□□ -0.91
BRCC3-208ENST00000453705 C14orf80Q86SX3 495 aa9.34□□□□□ -0.91
BRCC3-208ENST00000453705 CHPFQ8IZ52 775 aa9.34□□□□□ -0.91
BRCC3-208ENST00000453705 EMILIN3Q9NT22 766 aa9.34□□□□□ -0.91
BRCC3-208ENST00000453705 RRP7AQ9Y3A4 280 aaKnown RBP9.34□□□□□ -0.91
BRCC3-208ENST00000453705 CPDO75976 1380 aa9.33□□□□□ -0.92
BRCC3-208ENST00000453705 LTBP4Q8N2S1 1624 aa9.33□□□□□ -0.92
BRCC3-208ENST00000453705 TBX3O15119 743 aa9.33□□□□□ -0.92
BRCC3-208ENST00000453705 BRD3Q15059 726 aa9.33□□□□□ -0.92
BRCC3-208ENST00000453705 Q3C1V9 767 aa9.33□□□□□ -0.92
BRCC3-208ENST00000453705 ALKBH2Q6NS38 261 aa9.33□□□□□ -0.92
BRCC3-208ENST00000453705 IPO9Q96P70 1041 aaKnown RBP9.33□□□□□ -0.92
BRCC3-208ENST00000453705 TNS3Q68CZ2 1445 aa9.33□□□□□ -0.92
BRCC3-208ENST00000453705 CEMIPQ8WUJ3 1361 aa9.33□□□□□ -0.92
BRCC3-208ENST00000453705 ABL1P00519 1130 aa9.33□□□□□ -0.92
BRCC3-208ENST00000453705 MAP2K1Q02750 393 aaPredicted RBP9.33□□□□□ -0.92
BRCC3-208ENST00000453705 AGBL1Q96MI9 1066 aa9.33□□□□□ -0.92
BRCC3-208ENST00000453705 NOL7Q9UMY1 257 aaKnown RBP9.33□□□□□ -0.92
BRCC3-208ENST00000453705 PLCH1Q4KWH8 1693 aa9.32□□□□□ -0.92
BRCC3-208ENST00000453705 hCG_1984214I3L0E3 225 aa9.32□□□□□ -0.92
BRCC3-208ENST00000453705 EXOSC9Q06265 439 aaKnown RBP9.32□□□□□ -0.92
BRCC3-208ENST00000453705 MTMR3Q13615 1198 aa9.32□□□□□ -0.92
BRCC3-208ENST00000453705 MVPQ14764 893 aaKnown RBP9.32□□□□□ -0.92
BRCC3-208ENST00000453705 MAPRE1Q15691 268 aaKnown RBP9.32□□□□□ -0.92
BRCC3-208ENST00000453705 ERP27Q96DN0 273 aa9.32□□□□□ -0.92
BRCC3-208ENST00000453705 CRISPLD2Q9H0B8 497 aa9.32□□□□□ -0.92
BRCC3-208ENST00000453705 ARNT2Q9HBZ2 717 aa9.32□□□□□ -0.92
BRCC3-208ENST00000453705 WNK3Q9BYP7 1800 aa9.32□□□□□ -0.92
BRCC3-208ENST00000453705 ABCC4O15439 1325 aa9.32□□□□□ -0.92
BRCC3-208ENST00000453705 PLIN1O60240 522 aa9.32□□□□□ -0.92
BRCC3-208ENST00000453705 VAMP4O75379 141 aa9.32□□□□□ -0.92
BRCC3-208ENST00000453705 CDC27P30260 824 aa9.32□□□□□ -0.92
BRCC3-208ENST00000453705 MAN1A1P33908 653 aa9.32□□□□□ -0.92
BRCC3-208ENST00000453705 ZNF394Q53GI3 561 aa9.32□□□□□ -0.92
BRCC3-208ENST00000453705 MFSD4BQ5TF39 518 aa9.32□□□□□ -0.92
BRCC3-208ENST00000453705 MCF2L2Q86YR7 1114 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms