RNA–Protein interactions for RNA: ENST00000453024.5

CTNNB1-210, Transcript of catenin beta 1, humanhuman

TSL 2 BASIC

Gene CTNNB1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-210ENST00000453024 EIF3JO75822 258 aaKnown RBP19.22■□□□□ 0.67
CTNNB1-210ENST00000453024 ATP1A3P13637 1013 aa19.22■□□□□ 0.67
CTNNB1-210ENST00000453024 RPS6KB1P23443 525 aa19.22■□□□□ 0.67
CTNNB1-210ENST00000453024 NCAPHQ15003 741 aa19.22■□□□□ 0.67
CTNNB1-210ENST00000453024 SKIDA1Q1XH10 827 aa19.22■□□□□ 0.67
CTNNB1-210ENST00000453024 FAM212AQ96EL1 285 aa19.22■□□□□ 0.67
CTNNB1-210ENST00000453024 SDF4Q9BRK5 362 aa19.22■□□□□ 0.67
CTNNB1-210ENST00000453024 MED4Q9NPJ6 270 aa19.22■□□□□ 0.67
CTNNB1-210ENST00000453024 KIF1CO43896 1103 aaKnown RBP19.21■□□□□ 0.67
CTNNB1-210ENST00000453024 FOSBP53539 338 aa19.21■□□□□ 0.67
CTNNB1-210ENST00000453024 TTLL5Q6EMB2 1281 aa19.21■□□□□ 0.67
CTNNB1-210ENST00000453024 ISM2Q6H9L7 571 aa19.21■□□□□ 0.67
CTNNB1-210ENST00000453024 PNKPQ96T60 521 aa19.21■□□□□ 0.67
CTNNB1-210ENST00000453024 L1RE1Q9UN81 338 aa19.21■□□□□ 0.67
CTNNB1-210ENST00000453024 BIN1O00499 593 aa19.21■□□□□ 0.67
CTNNB1-210ENST00000453024 FLIIQ13045 1269 aa19.21■□□□□ 0.67
CTNNB1-210ENST00000453024 DPF2Q92785 391 aa19.21■□□□□ 0.67
CTNNB1-210ENST00000453024 USP28Q96RU2 1077 aa19.21■□□□□ 0.67
CTNNB1-210ENST00000453024 BPIFA3Q9BQP9 254 aa19.21■□□□□ 0.67
CTNNB1-210ENST00000453024 ABCB6Q9NP58 842 aa19.21■□□□□ 0.67
CTNNB1-210ENST00000453024 UBTFL1P0CB47 393 aaPredicted RBP19.2■□□□□ 0.66
CTNNB1-210ENST00000453024 CNPY4Q8N129 248 aa19.2■□□□□ 0.66
CTNNB1-210ENST00000453024 CCDC102AQ96A19 550 aa19.2■□□□□ 0.66
CTNNB1-210ENST00000453024 MNAT1P51948 309 aa19.2■□□□□ 0.66
CTNNB1-210ENST00000453024 FCHSD1Q86WN1 690 aa19.2■□□□□ 0.66
CTNNB1-210ENST00000453024 TMEM139Q8IV31 216 aa19.2■□□□□ 0.66
CTNNB1-210ENST00000453024 MAP4K1Q92918 833 aa19.2■□□□□ 0.66
CTNNB1-210ENST00000453024 ME1P48163 572 aa19.2■□□□□ 0.66
CTNNB1-210ENST00000453024 FMR1NBQ8N0W7 255 aaPredicted RBP19.2■□□□□ 0.66
CTNNB1-210ENST00000453024 KIAA1468Q9P260 1216 aa19.2■□□□□ 0.66
CTNNB1-210ENST00000453024 CRYBG1Q9Y4K1 1723 aa19.19■□□□□ 0.66
CTNNB1-210ENST00000453024 GLRX3O76003 335 aaKnown RBP19.19■□□□□ 0.66
CTNNB1-210ENST00000453024 USP5P45974 858 aa19.19■□□□□ 0.66
CTNNB1-210ENST00000453024 CHMP4BP1P59074 171 aa19.19■□□□□ 0.66
CTNNB1-210ENST00000453024 FAM204AQ9H8W3 233 aa19.19■□□□□ 0.66
CTNNB1-210ENST00000453024 SULT6B1Q6IMI4 303 aa19.19■□□□□ 0.66
CTNNB1-210ENST00000453024 NME9Q86XW9 330 aa19.19■□□□□ 0.66
CTNNB1-210ENST00000453024 MSL3Q8N5Y2 521 aaKnown RBP19.19■□□□□ 0.66
CTNNB1-210ENST00000453024 FAM71BQ8TC56 605 aa19.19■□□□□ 0.66
CTNNB1-210ENST00000453024 FAM227BQ96M60 508 aa19.19■□□□□ 0.66
CTNNB1-210ENST00000453024 ERLIN2O94905 339 aa19.18■□□□□ 0.66
CTNNB1-210ENST00000453024 HNRNPH1P31943 449 aaKnown RBP19.18■□□□□ 0.66
CTNNB1-210ENST00000453024 LIG3P49916 1009 aa19.18■□□□□ 0.66
CTNNB1-210ENST00000453024 EIF5P55010 431 aaKnown RBP19.18■□□□□ 0.66
CTNNB1-210ENST00000453024 NECTIN2Q92692 538 aa19.18■□□□□ 0.66
CTNNB1-210ENST00000453024 STK31Q9BXU1 1019 aa19.18■□□□□ 0.66
CTNNB1-210ENST00000453024 PUF60Q9UHX1 559 aaKnown RBP19.18■□□□□ 0.66
CTNNB1-210ENST00000453024 CRB1P82279 1406 aa19.18■□□□□ 0.66
CTNNB1-210ENST00000453024 NPATQ14207 1427 aa19.18■□□□□ 0.66
CTNNB1-210ENST00000453024 CCDC196A0A1B0GTZ2 297 aa19.18■□□□□ 0.66
CTNNB1-210ENST00000453024 A0A1B0GVL5 298 aa19.18■□□□□ 0.66
CTNNB1-210ENST00000453024 TDO2P48775 406 aa19.18■□□□□ 0.66
CTNNB1-210ENST00000453024 SATB1Q01826 763 aa19.18■□□□□ 0.66
CTNNB1-210ENST00000453024 POLA2Q14181 598 aa19.18■□□□□ 0.66
CTNNB1-210ENST00000453024 HSD3B7Q9H2F3 369 aa19.18■□□□□ 0.66
CTNNB1-210ENST00000453024 RAB21Q9UL25 225 aa19.18■□□□□ 0.66
CTNNB1-210ENST00000453024 PTPRMP28827 1452 aa19.17■□□□□ 0.66
CTNNB1-210ENST00000453024 ARHGAP6O43182 974 aa19.17■□□□□ 0.66
CTNNB1-210ENST00000453024 HSP90B2PQ58FF3 399 aa19.17■□□□□ 0.66
CTNNB1-210ENST00000453024 KCNV1Q6PIU1 500 aa19.17■□□□□ 0.66
CTNNB1-210ENST00000453024 TSPYL4Q9UJ04 414 aa19.17■□□□□ 0.66
CTNNB1-210ENST00000453024 CASP8Q14790 479 aa19.17■□□□□ 0.66
CTNNB1-210ENST00000453024 TOGARAM2Q6ZUX3 1019 aa19.17■□□□□ 0.66
CTNNB1-210ENST00000453024 ALDH8A1Q9H2A2 487 aaPredicted RBP19.17■□□□□ 0.66
CTNNB1-210ENST00000453024 ARHGEF10O15013 1369 aa19.17■□□□□ 0.66
CTNNB1-210ENST00000453024 UBASH3AP57075 661 aa19.16■□□□□ 0.66
CTNNB1-210ENST00000453024 FBXW10Q5XX13 1052 aa19.16■□□□□ 0.66
CTNNB1-210ENST00000453024 SRGAP1Q7Z6B7 1085 aa19.16■□□□□ 0.66
CTNNB1-210ENST00000453024 CCDC12Q8WUD4 166 aaPredicted RBP19.16■□□□□ 0.66
CTNNB1-210ENST00000453024 CLIC6Q96NY7 704 aa19.16■□□□□ 0.66
CTNNB1-210ENST00000453024 MAP3K5Q99683 1374 aa19.16■□□□□ 0.66
CTNNB1-210ENST00000453024 CLTCQ00610 1675 aaKnown RBP19.16■□□□□ 0.66
CTNNB1-210ENST00000453024 CCDC189A1A4V9 331 aa19.16■□□□□ 0.66
CTNNB1-210ENST00000453024 TMEM232C9JQI7 657 aa19.16■□□□□ 0.66
CTNNB1-210ENST00000453024 EXOC5O00471 708 aa19.16■□□□□ 0.66
CTNNB1-210ENST00000453024 CUTAO60888 179 aa19.16■□□□□ 0.66
CTNNB1-210ENST00000453024 USP42Q9H9J4 1324 aaKnown RBP19.16■□□□□ 0.66
CTNNB1-210ENST00000453024 ERLIN1O75477 346 aa19.15■□□□□ 0.66
CTNNB1-210ENST00000453024 NDUFA8P51970 172 aa19.15■□□□□ 0.66
CTNNB1-210ENST00000453024 MRPS27Q92552 414 aaKnown RBP19.15■□□□□ 0.66
CTNNB1-210ENST00000453024 NEDD4P46934 1319 aa19.15■□□□□ 0.66
CTNNB1-210ENST00000453024 KARSQ15046 597 aaKnown RBP19.15■□□□□ 0.66
CTNNB1-210ENST00000453024 MSANTD4Q8NCY6 345 aa19.15■□□□□ 0.66
CTNNB1-210ENST00000453024 IRX2Q9BZI1 471 aaPredicted RBP19.15■□□□□ 0.66
CTNNB1-210ENST00000453024 SIL1Q9H173 461 aa19.15■□□□□ 0.66
CTNNB1-210ENST00000453024 LMTK2Q8IWU2 1503 aa19.15■□□□□ 0.66
CTNNB1-210ENST00000453024 WDHD1O75717 1129 aaPredicted RBP19.15■□□□□ 0.66
CTNNB1-210ENST00000453024 NMIQ13287 307 aaPredicted RBP19.15■□□□□ 0.66
CTNNB1-210ENST00000453024 ERC1Q8IUD2 1116 aa19.15■□□□□ 0.66
CTNNB1-210ENST00000453024 PCDHA7Q9UN72 937 aa19.15■□□□□ 0.66
CTNNB1-210ENST00000453024 NEXMIFQ5QGS0 1516 aa19.14■□□□□ 0.65
CTNNB1-210ENST00000453024 NPHP4O75161 1426 aaPredicted RBP19.14■□□□□ 0.65
CTNNB1-210ENST00000453024 GOLGA6L9A6NEM1 432 aa19.14■□□□□ 0.65
CTNNB1-210ENST00000453024 NLRP12P59046 1061 aa19.14■□□□□ 0.65
CTNNB1-210ENST00000453024 CFAP100Q494V2 611 aa19.14■□□□□ 0.65
CTNNB1-210ENST00000453024 VSTM4Q8IW00 320 aa19.14■□□□□ 0.65
CTNNB1-210ENST00000453024 BCCIPQ9P287 314 aaKnown RBP eCLIP19.14■□□□□ 0.659e-7■■■■□ 21.8
CTNNB1-210ENST00000453024 XRN1Q8IZH2 1706 aaKnown RBP19.14■□□□□ 0.65
CTNNB1-210ENST00000453024 SERPINC1P01008 464 aa19.14■□□□□ 0.65
CTNNB1-210ENST00000453024 TOP1P11387 765 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms