RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 TTLL11Q8NHH1 800 aa11.38□□□□□ -0.59
DEPDC1B-202ENST00000453022 GREM2Q9H772 168 aa11.38□□□□□ -0.59
DEPDC1B-202ENST00000453022 LAMB1P07942 1786 aa11.37□□□□□ -0.59
DEPDC1B-202ENST00000453022 ATP2B4P23634 1241 aa11.37□□□□□ -0.59
DEPDC1B-202ENST00000453022 CCDC184Q52MB2 194 aa11.37□□□□□ -0.59
DEPDC1B-202ENST00000453022 CCDC102AQ96A19 550 aa11.37□□□□□ -0.59
DEPDC1B-202ENST00000453022 CDC5LQ99459 802 aaKnown RBP11.37□□□□□ -0.59
DEPDC1B-202ENST00000453022 MYOZ2Q9NPC6 264 aa11.37□□□□□ -0.59
DEPDC1B-202ENST00000453022 SAGE1Q9NXZ1 904 aa11.37□□□□□ -0.59
DEPDC1B-202ENST00000453022 SCAF8Q9UPN6 1271 aaKnown RBP11.37□□□□□ -0.59
DEPDC1B-202ENST00000453022 HTTP42858 3142 aa11.37□□□□□ -0.59
DEPDC1B-202ENST00000453022 USP17L3A6NCW0 530 aa11.37□□□□□ -0.59
DEPDC1B-202ENST00000453022 USP17L4A6NCW7 530 aa11.37□□□□□ -0.59
DEPDC1B-202ENST00000453022 NEURL1BA8MQ27 555 aa11.37□□□□□ -0.59
DEPDC1B-202ENST00000453022 USP17L8P0C7I0 530 aa11.37□□□□□ -0.59
DEPDC1B-202ENST00000453022 MLLT1Q03111 559 aaPredicted RBP11.37□□□□□ -0.59
DEPDC1B-202ENST00000453022 G2E3Q7L622 706 aa11.37□□□□□ -0.59
DEPDC1B-202ENST00000453022 USP17L1Q7RTZ2 530 aa11.37□□□□□ -0.59
DEPDC1B-202ENST00000453022 PODNQ7Z5L7 613 aa11.37□□□□□ -0.59
DEPDC1B-202ENST00000453022 RASAL3Q86YV0 1011 aa11.37□□□□□ -0.59
DEPDC1B-202ENST00000453022 MXD3Q9BW11 206 aa11.37□□□□□ -0.59
DEPDC1B-202ENST00000453022 RNF186Q9NXI6 227 aa11.37□□□□□ -0.59
DEPDC1B-202ENST00000453022 MINPP1Q9UNW1 487 aa11.37□□□□□ -0.59
DEPDC1B-202ENST00000453022 PITPNM2Q9BZ72 1349 aa11.37□□□□□ -0.59
DEPDC1B-202ENST00000453022 DACT2Q5SW24 774 aa11.36□□□□□ -0.59
DEPDC1B-202ENST00000453022 CSRNP1Q96S65 589 aa11.36□□□□□ -0.59
DEPDC1B-202ENST00000453022 BSDC1Q9NW68 430 aaPredicted RBP11.36□□□□□ -0.59
DEPDC1B-202ENST00000453022 CENPFP49454 3210 aa11.35□□□□□ -0.59
DEPDC1B-202ENST00000453022 TRPA1O75762 1119 aa11.35□□□□□ -0.59
DEPDC1B-202ENST00000453022 CCT4P50991 539 aaKnown RBP11.35□□□□□ -0.59
DEPDC1B-202ENST00000453022 NBPF9Q3BBW0 867 aa11.35□□□□□ -0.59
DEPDC1B-202ENST00000453022 MOB2Q70IA6 237 aa11.35□□□□□ -0.59
DEPDC1B-202ENST00000453022 UBE3BQ7Z3V4 1068 aa11.35□□□□□ -0.59
DEPDC1B-202ENST00000453022 TXNRD3Q86VQ6 643 aa11.35□□□□□ -0.59
DEPDC1B-202ENST00000453022 CHMP4AQ9BY43 222 aa11.35□□□□□ -0.59
DEPDC1B-202ENST00000453022 H7C1W4 665 aa11.34□□□□□ -0.59
DEPDC1B-202ENST00000453022 KLRK1P26718 216 aa11.34□□□□□ -0.59
DEPDC1B-202ENST00000453022 CASP7P55210 303 aa11.34□□□□□ -0.59
DEPDC1B-202ENST00000453022 NEXNQ0ZGT2 675 aa11.34□□□□□ -0.59
DEPDC1B-202ENST00000453022 CCDC27Q2M243 656 aa11.34□□□□□ -0.59
DEPDC1B-202ENST00000453022 TWISTNBQ3B726 338 aaPredicted RBP11.34□□□□□ -0.59
DEPDC1B-202ENST00000453022 WWC1Q8IX03 1113 aa11.34□□□□□ -0.59
DEPDC1B-202ENST00000453022 STK31Q9BXU1 1019 aa11.34□□□□□ -0.59
DEPDC1B-202ENST00000453022 FKBP1BP68106 108 aa11.33□□□□□ -0.6
DEPDC1B-202ENST00000453022 PRAMEF18Q5VWM3 479 aa11.33□□□□□ -0.6
DEPDC1B-202ENST00000453022 ARAP2Q8WZ64 1704 aa11.33□□□□□ -0.6
DEPDC1B-202ENST00000453022 WNT10BO00744 389 aa11.33□□□□□ -0.6
DEPDC1B-202ENST00000453022 SLC4A2P04920 1241 aa11.33□□□□□ -0.6
DEPDC1B-202ENST00000453022 GCKRQ14397 625 aa11.33□□□□□ -0.6
DEPDC1B-202ENST00000453022 STRIP1Q5VSL9 837 aa11.33□□□□□ -0.6
DEPDC1B-202ENST00000453022 PLA2G12BQ9BX93 195 aa11.33□□□□□ -0.6
DEPDC1B-202ENST00000453022 COA1Q9GZY4 146 aa11.33□□□□□ -0.6
DEPDC1B-202ENST00000453022 MYO3BQ8WXR4 1341 aa11.32□□□□□ -0.6
DEPDC1B-202ENST00000453022 UBE2Q2LH0YL09 131 aa11.32□□□□□ -0.6
DEPDC1B-202ENST00000453022 SASH1O94885 1247 aa11.32□□□□□ -0.6
DEPDC1B-202ENST00000453022 ITGA6P23229 1130 aa11.32□□□□□ -0.6
DEPDC1B-202ENST00000453022 FLIIQ13045 1269 aa11.32□□□□□ -0.6
DEPDC1B-202ENST00000453022 FBXW7Q969H0 707 aa11.32□□□□□ -0.6
DEPDC1B-202ENST00000453022 LEMD3Q9Y2U8 911 aa11.32□□□□□ -0.6
DEPDC1B-202ENST00000453022 OTOFQ9HC10 1997 aa11.31□□□□□ -0.6
DEPDC1B-202ENST00000453022 PDE4DIPQ5VU43 2346 aa11.31□□□□□ -0.6
DEPDC1B-202ENST00000453022 ZNF804BA4D1E1 1349 aa11.31□□□□□ -0.6
DEPDC1B-202ENST00000453022 IL16Q14005 1332 aa11.31□□□□□ -0.6
DEPDC1B-202ENST00000453022 FANCIQ9NVI1 1328 aa11.31□□□□□ -0.6
DEPDC1B-202ENST00000453022 IRS2Q9Y4H2 1338 aa11.31□□□□□ -0.6
DEPDC1B-202ENST00000453022 SLC34A2O95436 690 aa11.31□□□□□ -0.6
DEPDC1B-202ENST00000453022 CSF1RP07333 972 aa11.31□□□□□ -0.6
DEPDC1B-202ENST00000453022 IGHMBP2P38935 993 aaKnown RBP11.31□□□□□ -0.6
DEPDC1B-202ENST00000453022 MKI67P46013 3256 aaKnown RBP11.31□□□□□ -0.6
DEPDC1B-202ENST00000453022 REM2Q8IYK8 340 aaPredicted RBP11.3□□□□□ -0.6
DEPDC1B-202ENST00000453022 OGFOD1Q8N543 542 aa11.3□□□□□ -0.6
DEPDC1B-202ENST00000453022 DNAAF4Q8WXU2 420 aa11.3□□□□□ -0.6
DEPDC1B-202ENST00000453022 ZBED3Q96IU2 234 aaPredicted RBP11.3□□□□□ -0.6
DEPDC1B-202ENST00000453022 SSC5DA1L4H1 1573 aa11.3□□□□□ -0.6
DEPDC1B-202ENST00000453022 BRCA2P51587 3418 aa11.3□□□□□ -0.6
DEPDC1B-202ENST00000453022 COL1A1P02452 1464 aaPredicted RBP11.29□□□□□ -0.6
DEPDC1B-202ENST00000453022 SNAP23O00161 211 aa11.29□□□□□ -0.6
DEPDC1B-202ENST00000453022 SOX10P56693 466 aa11.29□□□□□ -0.6
DEPDC1B-202ENST00000453022 CHRNDQ07001 517 aa11.29□□□□□ -0.6
DEPDC1B-202ENST00000453022 FKBP5Q13451 457 aaPredicted RBP11.29□□□□□ -0.6
DEPDC1B-202ENST00000453022 TTLL5Q6EMB2 1281 aa11.29□□□□□ -0.6
DEPDC1B-202ENST00000453022 CTU1Q7Z7A3 348 aaKnown RBP11.29□□□□□ -0.6
DEPDC1B-202ENST00000453022 KIAA0825Q8IV33 1275 aa11.29□□□□□ -0.6
DEPDC1B-202ENST00000453022 LINS1Q8NG48 757 aa11.29□□□□□ -0.6
DEPDC1B-202ENST00000453022 ANKRD2Q9GZV1 360 aa11.29□□□□□ -0.6
DEPDC1B-202ENST00000453022 GTF2IP78347 998 aa11.28□□□□□ -0.6
DEPDC1B-202ENST00000453022 TTLL12Q14166 644 aaPredicted RBP11.28□□□□□ -0.6
DEPDC1B-202ENST00000453022 CERS5Q8N5B7 392 aa11.28□□□□□ -0.6
DEPDC1B-202ENST00000453022 MPHOSPH8Q99549 860 aa11.28□□□□□ -0.6
DEPDC1B-202ENST00000453022 MYH16Q9H6N6 1097 aa11.28□□□□□ -0.6
DEPDC1B-202ENST00000453022 VAMP4O75379 141 aa11.28□□□□□ -0.6
DEPDC1B-202ENST00000453022 TBC1D8O95759 1140 aa11.28□□□□□ -0.6
DEPDC1B-202ENST00000453022 FOXO4P98177 505 aa11.28□□□□□ -0.6
DEPDC1B-202ENST00000453022 MKRN3Q13064 507 aaKnown RBP11.28□□□□□ -0.6
DEPDC1B-202ENST00000453022 APOBEC3FQ8IUX4 373 aaKnown RBP11.28□□□□□ -0.6
DEPDC1B-202ENST00000453022 CD209Q9NNX6 404 aa11.28□□□□□ -0.6
DEPDC1B-202ENST00000453022 FZD1Q9UP38 647 aa11.28□□□□□ -0.6
DEPDC1B-202ENST00000453022 TAF5LO75529 589 aa11.27□□□□□ -0.61
DEPDC1B-202ENST00000453022 KCNJ4P48050 445 aa11.27□□□□□ -0.61
DEPDC1B-202ENST00000453022 TM4SF4P48230 202 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms