RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 C15orf52Q6ZUT6 534 aaKnown RBP24.51■■□□□ 1.51
USP40-207ENST00000450940 SUCLG2Q96I99 432 aa24.51■■□□□ 1.51
USP40-207ENST00000450940 CHMP3Q9Y3E7 222 aa24.51■■□□□ 1.51
USP40-207ENST00000450940 IRS2Q9Y4H2 1338 aa24.51■■□□□ 1.51
USP40-207ENST00000450940 HSPA1AP0DMV8 641 aaKnown RBP24.5■■□□□ 1.51
USP40-207ENST00000450940 HSPA1BP0DMV9 641 aaKnown RBP24.5■■□□□ 1.51
USP40-207ENST00000450940 ABT1Q9ULW3 272 aaKnown RBP24.5■■□□□ 1.51
USP40-207ENST00000450940 KLRK1P26718 216 aa24.49■■□□□ 1.51
USP40-207ENST00000450940 BRPF1P55201 1214 aaPredicted RBP24.49■■□□□ 1.51
USP40-207ENST00000450940 KIF4BQ2VIQ3 1234 aa24.49■■□□□ 1.51
USP40-207ENST00000450940 DACT2Q5SW24 774 aa24.49■■□□□ 1.51
USP40-207ENST00000450940 STRIP1Q5VSL9 837 aa24.49■■□□□ 1.51
USP40-207ENST00000450940 TLL2Q9Y6L7 1015 aa24.49■■□□□ 1.51
USP40-207ENST00000450940 USP17L8P0C7I0 530 aa24.48■■□□□ 1.51
USP40-207ENST00000450940 RABL6Q3YEC7 729 aaPredicted RBP24.48■■□□□ 1.51
USP40-207ENST00000450940 RBM26Q5T8P6 1007 aaKnown RBP24.48■■□□□ 1.51
USP40-207ENST00000450940 LDHAL6AQ6ZMR3 332 aa24.48■■□□□ 1.51
USP40-207ENST00000450940 ZNF594Q96JF6 807 aaPredicted RBP24.48■■□□□ 1.51
USP40-207ENST00000450940 TAF5LO75529 589 aa24.47■■□□□ 1.51
USP40-207ENST00000450940 CELF2O95319 508 aaKnown RBP24.47■■□□□ 1.51
USP40-207ENST00000450940 USP48Q86UV5 1035 aa24.47■■□□□ 1.51
USP40-207ENST00000450940 USP44Q9H0E7 712 aa24.47■■□□□ 1.51
USP40-207ENST00000450940 SMC4Q9NTJ3 1288 aa24.47■■□□□ 1.51
USP40-207ENST00000450940 MYO3BQ8WXR4 1341 aa24.46■■□□□ 1.51
USP40-207ENST00000450940 WDR33Q9C0J8 1336 aaKnown RBP24.46■■□□□ 1.51
USP40-207ENST00000450940 KCNJ4P48050 445 aa24.46■■□□□ 1.51
USP40-207ENST00000450940 SAPCD2Q86UD0 394 aa24.46■■□□□ 1.51
USP40-207ENST00000450940 HELBQ8NG08 1087 aaPredicted RBP24.46■■□□□ 1.51
USP40-207ENST00000450940 DCPSQ96C86 337 aaKnown RBP24.46■■□□□ 1.51
USP40-207ENST00000450940 HHIPL1Q96JK4 782 aa24.46■■□□□ 1.51
USP40-207ENST00000450940 SNAP23O00161 211 aa24.45■■□□□ 1.5
USP40-207ENST00000450940 MMP14P50281 582 aa24.45■■□□□ 1.5
USP40-207ENST00000450940 TAF7LQ5H9L4 462 aa24.45■■□□□ 1.5
USP40-207ENST00000450940 KRT26Q7Z3Y9 468 aa24.45■■□□□ 1.5
USP40-207ENST00000450940 CD209Q9NNX6 404 aa24.45■■□□□ 1.5
USP40-207ENST00000450940 THSD7BQ9C0I4 1608 aa24.45■■□□□ 1.5
USP40-207ENST00000450940 IFFO2Q5TF58 517 aa24.44■■□□□ 1.5
USP40-207ENST00000450940 TTLL5Q6EMB2 1281 aa24.44■■□□□ 1.5
USP40-207ENST00000450940 ANKRD44Q8N8A2 993 aa24.44■■□□□ 1.5
USP40-207ENST00000450940 BICC1Q9H694 974 aaKnown RBP24.44■■□□□ 1.5
USP40-207ENST00000450940 MYOZ2Q9NPC6 264 aa24.44■■□□□ 1.5
USP40-207ENST00000450940 CNNM1Q9NRU3 951 aa24.44■■□□□ 1.5
USP40-207ENST00000450940 ASTN2O75129 1339 aaPredicted RBP24.42■■□□□ 1.5
USP40-207ENST00000450940 IL1R1P14778 569 aa24.42■■□□□ 1.5
USP40-207ENST00000450940 ECE1P42892 770 aa24.42■■□□□ 1.5
USP40-207ENST00000450940 SCARF1Q14162 830 aa24.42■■□□□ 1.5
USP40-207ENST00000450940 DIEXFQ68CQ4 756 aaKnown RBP24.42■■□□□ 1.5
USP40-207ENST00000450940 DLK2Q6UY11 383 aa24.42■■□□□ 1.5
USP40-207ENST00000450940 MIER1Q8N108 512 aa24.42■■□□□ 1.5
USP40-207ENST00000450940 CAPNS2Q96L46 248 aa24.42■■□□□ 1.5
USP40-207ENST00000450940 MXD3Q9BW11 206 aa24.42■■□□□ 1.5
USP40-207ENST00000450940 WBP1LQ9NX94 342 aa24.42■■□□□ 1.5
USP40-207ENST00000450940 GGA3Q9NZ52 723 aa24.42■■□□□ 1.5
USP40-207ENST00000450940 RIPOR2Q9Y4F9 1068 aa24.42■■□□□ 1.5
USP40-207ENST00000450940 COL13A1Q5TAT6 717 aaPredicted RBP24.41■■□□□ 1.5
USP40-207ENST00000450940 PUS3Q9BZE2 481 aaKnown RBP24.41■■□□□ 1.5
USP40-207ENST00000450940 PITPNM2Q9BZ72 1349 aa24.4■■□□□ 1.5
USP40-207ENST00000450940 ADM5C9JUS6 153 aa24.4■■□□□ 1.5
USP40-207ENST00000450940 RARSP54136 660 aaKnown RBP24.4■■□□□ 1.5
USP40-207ENST00000450940 GTF2IP78347 998 aa24.4■■□□□ 1.5
USP40-207ENST00000450940 UBE4AQ14139 1066 aa24.4■■□□□ 1.5
USP40-207ENST00000450940 CYP4F22Q6NT55 531 aa24.4■■□□□ 1.5
USP40-207ENST00000450940 SULF1Q8IWU6 871 aa24.4■■□□□ 1.5
USP40-207ENST00000450940 OGFOD1Q8N543 542 aa24.4■■□□□ 1.5
USP40-207ENST00000450940 NOB1Q9ULX3 412 aaKnown RBP24.4■■□□□ 1.5
USP40-207ENST00000450940 ANGEL2Q5VTE6 544 aaKnown RBP24.39■■□□□ 1.49
USP40-207ENST00000450940 ZNF804AQ7Z570 1209 aa24.39■■□□□ 1.49
USP40-207ENST00000450940 ZNF408Q9H9D4 720 aa24.39■■□□□ 1.49
USP40-207ENST00000450940 PLIN1O60240 522 aa24.38■■□□□ 1.49
USP40-207ENST00000450940 FBXW7Q969H0 707 aa24.38■■□□□ 1.49
USP40-207ENST00000450940 API5Q9BZZ5 524 aaKnown RBP24.38■■□□□ 1.49
USP40-207ENST00000450940 MROH5Q6ZUA9 1318 aa24.37■■□□□ 1.49
USP40-207ENST00000450940 FOXN1O15353 648 aa24.37■■□□□ 1.49
USP40-207ENST00000450940 FKBP1AP62942 108 aaKnown RBP24.37■■□□□ 1.49
USP40-207ENST00000450940 MAP2K1Q02750 393 aaPredicted RBP24.37■■□□□ 1.49
USP40-207ENST00000450940 ARHGAP45Q92619 1136 aa24.37■■□□□ 1.49
USP40-207ENST00000450940 MAP2K2P36507 400 aa24.36■■□□□ 1.49
USP40-207ENST00000450940 NBPF9Q3BBW0 867 aa24.36■■□□□ 1.49
USP40-207ENST00000450940 CERS5Q8N5B7 392 aa24.36■■□□□ 1.49
USP40-207ENST00000450940 ZBED3Q96IU2 234 aaPredicted RBP24.36■■□□□ 1.49
USP40-207ENST00000450940 GBA2Q9HCG7 927 aaPredicted RBP24.36■■□□□ 1.49
USP40-207ENST00000450940 WNT10BO00744 389 aa24.35■■□□□ 1.49
USP40-207ENST00000450940 PAXIP1Q6ZW49 1069 aaPredicted RBP24.35■■□□□ 1.49
USP40-207ENST00000450940 SASH1O94885 1247 aa24.34■■□□□ 1.49
USP40-207ENST00000450940 LRRC24Q50LG9 513 aa24.34■■□□□ 1.49
USP40-207ENST00000450940 KIAA0825Q8IV33 1275 aa24.34■■□□□ 1.49
USP40-207ENST00000450940 C2orf69Q8N8R5 385 aa24.34■■□□□ 1.49
USP40-207ENST00000450940 TDRD7Q8NHU6 1098 aaKnown RBP24.34■■□□□ 1.49
USP40-207ENST00000450940 AIDAQ96BJ3 306 aa24.34■■□□□ 1.49
USP40-207ENST00000450940 CDCA5Q96FF9 252 aa24.34■■□□□ 1.49
USP40-207ENST00000450940 HDAC9Q9UKV0 1011 aa24.34■■□□□ 1.49
USP40-207ENST00000450940 FAM205AQ6ZU69 1335 aa24.34■■□□□ 1.49
USP40-207ENST00000450940 RFX5P48382 616 aaPredicted RBP24.33■■□□□ 1.49
USP40-207ENST00000450940 CTCFP49711 727 aaPredicted RBP24.33■■□□□ 1.49
USP40-207ENST00000450940 HUNKP57058 714 aa24.33■■□□□ 1.49
USP40-207ENST00000450940 VGLL2Q8N8G2 317 aa24.33■■□□□ 1.49
USP40-207ENST00000450940 FAM84BQ96KN1 310 aaPredicted RBP24.33■■□□□ 1.49
USP40-207ENST00000450940 KIF16BQ96L93 1317 aa24.33■■□□□ 1.48
USP40-207ENST00000450940 MTMR14Q8NCE2 650 aa24.32■■□□□ 1.48
USP40-207ENST00000450940 PRDM10Q9NQV6 1147 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms