RNA–Protein interactions for RNA: ENST00000450501.5

COPS7B-215, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-215ENST00000450501 SIL1Q9H173 461 aa23.36■■□□□ 1.33
COPS7B-215ENST00000450501 C1orf115Q9H7X2 142 aa23.36■■□□□ 1.33
COPS7B-215ENST00000450501 SCN9AQ15858 1988 aa23.36■■□□□ 1.33
COPS7B-215ENST00000450501 PDE8BO95263 885 aa23.35■■□□□ 1.33
COPS7B-215ENST00000450501 C20orf194Q5TEA3 1177 aa23.35■■□□□ 1.33
COPS7B-215ENST00000450501 ATG9AQ7Z3C6 839 aa23.35■■□□□ 1.33
COPS7B-215ENST00000450501 VGLL2Q8N8G2 317 aa23.35■■□□□ 1.33
COPS7B-215ENST00000450501 PA2G4Q9UQ80 394 aaKnown RBP23.35■■□□□ 1.33
COPS7B-215ENST00000450501 PSME4Q14997 1843 aa23.35■■□□□ 1.33
COPS7B-215ENST00000450501 PNMA6EA0A0J9YXQ4 647 aa23.34■■□□□ 1.33
COPS7B-215ENST00000450501 KLRK1P26718 216 aa23.34■■□□□ 1.33
COPS7B-215ENST00000450501 LMOD1P29536 600 aaPredicted RBP23.34■■□□□ 1.33
COPS7B-215ENST00000450501 IL15P40933 162 aaPredicted RBP23.34■■□□□ 1.33
COPS7B-215ENST00000450501 RRP1P56182 461 aaKnown RBP23.34■■□□□ 1.33
COPS7B-215ENST00000450501 ATP8B2P98198 1209 aa23.34■■□□□ 1.33
COPS7B-215ENST00000450501 HACL1Q9UJ83 578 aa23.34■■□□□ 1.33
COPS7B-215ENST00000450501 IRS2Q9Y4H2 1338 aa23.33■■□□□ 1.33
COPS7B-215ENST00000450501 PSMD14O00487 310 aa23.33■■□□□ 1.33
COPS7B-215ENST00000450501 ZNF804AQ7Z570 1209 aa23.33■■□□□ 1.33
COPS7B-215ENST00000450501 KCNQ5Q9NR82 932 aa23.33■■□□□ 1.33
COPS7B-215ENST00000450501 ZBTB40Q9NUA8 1239 aa23.32■■□□□ 1.32
COPS7B-215ENST00000450501 CEP126Q9P2H0 1117 aa23.32■■□□□ 1.32
COPS7B-215ENST00000450501 TOMM70O94826 608 aa23.31■■□□□ 1.32
COPS7B-215ENST00000450501 GMPSP49915 693 aaPredicted RBP23.31■■□□□ 1.32
COPS7B-215ENST00000450501 SCNN1DP51172 638 aa23.31■■□□□ 1.32
COPS7B-215ENST00000450501 POLA2Q14181 598 aa23.31■■□□□ 1.32
COPS7B-215ENST00000450501 PUM3Q15397 648 aaKnown RBP23.31■■□□□ 1.32
COPS7B-215ENST00000450501 SSH3Q8TE77 659 aa23.31■■□□□ 1.32
COPS7B-215ENST00000450501 USP17L3A6NCW0 530 aa23.3■■□□□ 1.32
COPS7B-215ENST00000450501 USP17L4A6NCW7 530 aa23.3■■□□□ 1.32
COPS7B-215ENST00000450501 VIL1P09327 827 aaKnown RBP23.3■■□□□ 1.32
COPS7B-215ENST00000450501 USP17L1Q7RTZ2 530 aa23.3■■□□□ 1.32
COPS7B-215ENST00000450501 TAF1DQ9H5J8 278 aaPredicted RBP23.3■■□□□ 1.32
COPS7B-215ENST00000450501 CD209Q9NNX6 404 aa23.3■■□□□ 1.32
COPS7B-215ENST00000450501 GPRC5DQ9NZD1 345 aa23.3■■□□□ 1.32
COPS7B-215ENST00000450501 IFIT1P09914 478 aaKnown RBP23.29■■□□□ 1.32
COPS7B-215ENST00000450501 RPS12P25398 132 aaKnown RBP23.29■■□□□ 1.32
COPS7B-215ENST00000450501 EPHX2P34913 555 aa23.29■■□□□ 1.32
COPS7B-215ENST00000450501 G3BP1Q13283 466 aaKnown RBP eCLIP23.29■■□□□ 1.32
COPS7B-215ENST00000450501 CEP85Q6P2H3 762 aa23.29■■□□□ 1.32
COPS7B-215ENST00000450501 DPF2Q92785 391 aa23.29■■□□□ 1.32
COPS7B-215ENST00000450501 FGFR2P21802 821 aa23.28■■□□□ 1.32
COPS7B-215ENST00000450501 PNMA8AQ86V59 439 aaPredicted RBP23.28■■□□□ 1.32
COPS7B-215ENST00000450501 RBM46Q8TBY0 533 aaKnown RBP23.28■■□□□ 1.32
COPS7B-215ENST00000450501 LPIN2Q92539 896 aa23.28■■□□□ 1.32
COPS7B-215ENST00000450501 SLC5A1P13866 664 aa23.27■■□□□ 1.32
COPS7B-215ENST00000450501 IL1R1P14778 569 aa23.27■■□□□ 1.32
COPS7B-215ENST00000450501 HIBADHP31937 336 aaKnown RBP23.27■■□□□ 1.32
COPS7B-215ENST00000450501 EPS15P42566 896 aa23.27■■□□□ 1.32
COPS7B-215ENST00000450501 CAVIN4Q5BKX8 364 aa23.27■■□□□ 1.32
COPS7B-215ENST00000450501 STRIP1Q5VSL9 837 aa23.27■■□□□ 1.32
COPS7B-215ENST00000450501 FAM84BQ96KN1 310 aaPredicted RBP23.27■■□□□ 1.32
COPS7B-215ENST00000450501 ZBTB12Q9Y330 459 aaPredicted RBP23.27■■□□□ 1.32
COPS7B-215ENST00000450501 GYG1P46976 350 aa23.26■■□□□ 1.31
COPS7B-215ENST00000450501 ATP2B3Q16720 1220 aa23.26■■□□□ 1.31
COPS7B-215ENST00000450501 TTLL5Q6EMB2 1281 aa23.26■■□□□ 1.31
COPS7B-215ENST00000450501 RSBN1LQ6PCB5 846 aaPredicted RBP23.26■■□□□ 1.31
COPS7B-215ENST00000450501 VPS37DQ86XT2 251 aa23.26■■□□□ 1.31
COPS7B-215ENST00000450501 RPAP2Q8IXW5 612 aaPredicted RBP23.26■■□□□ 1.31
COPS7B-215ENST00000450501 AGBL3Q8NEM8 1001 aa23.26■■□□□ 1.31
COPS7B-215ENST00000450501 FBXW7Q969H0 707 aa23.26■■□□□ 1.31
COPS7B-215ENST00000450501 CNOT7Q9UIV1 285 aaKnown RBP23.26■■□□□ 1.31
COPS7B-215ENST00000450501 ZNF609O15014 1411 aa23.25■■□□□ 1.31
COPS7B-215ENST00000450501 H7C1D1 291 aa23.25■■□□□ 1.31
COPS7B-215ENST00000450501 C1QTNF8P60827 252 aa23.25■■□□□ 1.31
COPS7B-215ENST00000450501 FBXO33Q7Z6M2 555 aa23.25■■□□□ 1.31
COPS7B-215ENST00000450501 ADARB2Q9NS39 739 aaKnown RBP23.25■■□□□ 1.31
COPS7B-215ENST00000450501 AKAP2Q9Y2D5 859 aa23.25■■□□□ 1.31
COPS7B-215ENST00000450501 ZNF646O15015 1829 aaPredicted RBP23.24■■□□□ 1.31
COPS7B-215ENST00000450501 HMMRO75330 724 aa23.24■■□□□ 1.31
COPS7B-215ENST00000450501 SURF6O75683 361 aaKnown RBP23.24■■□□□ 1.31
COPS7B-215ENST00000450501 GTF2IP78347 998 aa23.24■■□□□ 1.31
COPS7B-215ENST00000450501 OS9Q13438 667 aaPredicted RBP23.24■■□□□ 1.31
COPS7B-215ENST00000450501 EAPPQ56P03 285 aaPredicted RBP23.24■■□□□ 1.31
COPS7B-215ENST00000450501 DACT2Q5SW24 774 aa23.24■■□□□ 1.31
COPS7B-215ENST00000450501 MICALL2Q8IY33 904 aa23.24■■□□□ 1.31
COPS7B-215ENST00000450501 MYO3BQ8WXR4 1341 aa23.24■■□□□ 1.31
COPS7B-215ENST00000450501 TFCP2Q12800 502 aa23.23■■□□□ 1.31
COPS7B-215ENST00000450501 USP50Q70EL3 339 aaPredicted RBP23.23■■□□□ 1.31
COPS7B-215ENST00000450501 LDHDQ86WU2 507 aa23.23■■□□□ 1.31
COPS7B-215ENST00000450501 SMC1BQ8NDV3 1235 aa23.23■■□□□ 1.31
COPS7B-215ENST00000450501 TDRD7Q8NHU6 1098 aaKnown RBP23.23■■□□□ 1.31
COPS7B-215ENST00000450501 NOP58Q9Y2X3 529 aaKnown RBP23.23■■□□□ 1.31
COPS7B-215ENST00000450501 SASH1O94885 1247 aa23.22■■□□□ 1.31
COPS7B-215ENST00000450501 FSTL1Q12841 308 aa23.22■■□□□ 1.31
COPS7B-215ENST00000450501 GMLQ99445 158 aa23.22■■□□□ 1.31
COPS7B-215ENST00000450501 BCAMP50895 628 aa23.21■■□□□ 1.31
COPS7B-215ENST00000450501 CLEC11AQ9Y240 323 aa23.21■■□□□ 1.31
COPS7B-215ENST00000450501 ARAP2Q8WZ64 1704 aa23.21■■□□□ 1.31
COPS7B-215ENST00000450501 ADAMTSL1Q8N6G6 1762 aa23.2■■□□□ 1.3
COPS7B-215ENST00000450501 FRAT2O75474 233 aaPredicted RBP23.2■■□□□ 1.3
COPS7B-215ENST00000450501 POTEIP0CG38 1075 aa23.2■■□□□ 1.3
COPS7B-215ENST00000450501 POTEJP0CG39 1038 aa23.2■■□□□ 1.3
COPS7B-215ENST00000450501 CHADLQ6NUI6 762 aa23.2■■□□□ 1.3
COPS7B-215ENST00000450501 CNKSR2Q8WXI2 1034 aa23.2■■□□□ 1.3
COPS7B-215ENST00000450501 FAM205AQ6ZU69 1335 aa23.19■■□□□ 1.3
COPS7B-215ENST00000450501 SHTN1A0MZ66 631 aa23.19■■□□□ 1.3
COPS7B-215ENST00000450501 USP17L8P0C7I0 530 aa23.19■■□□□ 1.3
COPS7B-215ENST00000450501 MXD3Q9BW11 206 aa23.19■■□□□ 1.3
COPS7B-215ENST00000450501 MYH13Q9UKX3 1938 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms