RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 ILDR1Q86SU0 546 aaPredicted RBP16.2■□□□□ 0.18
VPS52-212ENST00000445902 DPF2Q92785 391 aa16.2■□□□□ 0.18
VPS52-212ENST00000445902 HMG20BQ9P0W2 317 aa16.2■□□□□ 0.18
VPS52-212ENST00000445902 USP6P35125 1406 aa16.2■□□□□ 0.18
VPS52-212ENST00000445902 CYP21A2P08686 494 aa16.2■□□□□ 0.18
VPS52-212ENST00000445902 ALDH8A1Q9H2A2 487 aaPredicted RBP16.2■□□□□ 0.18
VPS52-212ENST00000445902 ZSWIM4Q9H7M6 989 aa16.2■□□□□ 0.18
VPS52-212ENST00000445902 KIAA1468Q9P260 1216 aa16.2■□□□□ 0.18
VPS52-212ENST00000445902 PHLPP2Q6ZVD8 1323 aa16.2■□□□□ 0.18
VPS52-212ENST00000445902 SF3A1Q15459 793 aaKnown RBP16.2■□□□□ 0.18
VPS52-212ENST00000445902 HSP90AA4PQ58FG1 418 aa16.2■□□□□ 0.18
VPS52-212ENST00000445902 ZNF396Q96N95 335 aaPredicted RBP16.2■□□□□ 0.18
VPS52-212ENST00000445902 LGR6Q9HBX8 967 aa16.2■□□□□ 0.18
VPS52-212ENST00000445902 POLR3DP05423 398 aaPredicted RBP16.19■□□□□ 0.18
VPS52-212ENST00000445902 FANCCQ00597 558 aa16.19■□□□□ 0.18
VPS52-212ENST00000445902 TEFQ10587 303 aa16.19■□□□□ 0.18
VPS52-212ENST00000445902 GPS2Q13227 327 aa16.19■□□□□ 0.18
VPS52-212ENST00000445902 SBNO1A3KN83 1393 aa16.19■□□□□ 0.18
VPS52-212ENST00000445902 EFCAB8A8MWE9 144 aa16.19■□□□□ 0.18
VPS52-212ENST00000445902 PROSER3Q2NL68 480 aa16.19■□□□□ 0.18
VPS52-212ENST00000445902 LRRFIP1Q32MZ4 808 aaKnown RBP16.19■□□□□ 0.18
VPS52-212ENST00000445902 SMARCC2Q8TAQ2 1214 aa16.19■□□□□ 0.18
VPS52-212ENST00000445902 SUCLG2Q96I99 432 aa16.19■□□□□ 0.18
VPS52-212ENST00000445902 BICC1Q9H694 974 aaKnown RBP16.19■□□□□ 0.18
VPS52-212ENST00000445902 NALCNQ8IZF0 1738 aa16.19■□□□□ 0.18
VPS52-212ENST00000445902 CCDC158Q5M9N0 1113 aa16.18■□□□□ 0.18
VPS52-212ENST00000445902 STOX1Q6ZVD7 989 aa16.18■□□□□ 0.18
VPS52-212ENST00000445902 REXO1L1PQ8IX06 675 aa16.18■□□□□ 0.18
VPS52-212ENST00000445902 EIF4A1P60842 406 aaKnown RBP16.18■□□□□ 0.18
VPS52-212ENST00000445902 MTX1Q13505 466 aa16.18■□□□□ 0.18
VPS52-212ENST00000445902 MUM1L1Q5H9M0 696 aa16.18■□□□□ 0.18
VPS52-212ENST00000445902 WDR24Q96S15 920 aa16.18■□□□□ 0.18
VPS52-212ENST00000445902 CLIC4Q9Y696 253 aa16.18■□□□□ 0.18
VPS52-212ENST00000445902 USP31Q70CQ4 1352 aa16.18■□□□□ 0.18
VPS52-212ENST00000445902 NRXN3Q9Y4C0 1643 aa16.18■□□□□ 0.18
VPS52-212ENST00000445902 KRT32Q14532 448 aa16.17■□□□□ 0.18
VPS52-212ENST00000445902 NCAPHQ15003 741 aa16.17■□□□□ 0.18
VPS52-212ENST00000445902 NAA16Q6N069 864 aaPredicted RBP16.17■□□□□ 0.18
VPS52-212ENST00000445902 ROBO2Q9HCK4 1378 aa16.17■□□□□ 0.18
VPS52-212ENST00000445902 A0A0G2JLW4 131 aa16.17■□□□□ 0.18
VPS52-212ENST00000445902 TMEM232C9JQI7 657 aa16.17■□□□□ 0.18
VPS52-212ENST00000445902 H3BQF6 201 aa16.17■□□□□ 0.18
VPS52-212ENST00000445902 SERPINC1P01008 464 aa16.17■□□□□ 0.18
VPS52-212ENST00000445902 SLC3A2P08195 630 aaKnown RBP16.17■□□□□ 0.18
VPS52-212ENST00000445902 STK38Q15208 465 aa16.17■□□□□ 0.18
VPS52-212ENST00000445902 CFAP100Q494V2 611 aa16.17■□□□□ 0.18
VPS52-212ENST00000445902 UBXN6Q9BZV1 441 aa16.17■□□□□ 0.18
VPS52-212ENST00000445902 GNG11P61952 73 aa16.17■□□□□ 0.18
VPS52-212ENST00000445902 AIMP1Q12904 312 aaKnown RBP16.17■□□□□ 0.18
VPS52-212ENST00000445902 PARD6BQ9BYG5 372 aa16.17■□□□□ 0.18
VPS52-212ENST00000445902 ARFGAP3Q9NP61 516 aa16.17■□□□□ 0.18
VPS52-212ENST00000445902 SNRKQ9NRH2 765 aa16.17■□□□□ 0.18
VPS52-212ENST00000445902 ADAM21Q9UKJ8 722 aa16.17■□□□□ 0.18
VPS52-212ENST00000445902 IRX3P78415 501 aaPredicted RBP16.16■□□□□ 0.18
VPS52-212ENST00000445902 TSGA10IPQ3SY00 556 aa16.16■□□□□ 0.18
VPS52-212ENST00000445902 PFKFB2O60825 505 aa16.16■□□□□ 0.18
VPS52-212ENST00000445902 ALDH1L1O75891 902 aa16.16■□□□□ 0.18
VPS52-212ENST00000445902 UBASH3AP57075 661 aa16.16■□□□□ 0.18
VPS52-212ENST00000445902 PPP2R3AQ06190 1150 aa16.16■□□□□ 0.18
VPS52-212ENST00000445902 KAZALD1Q96I82 304 aa16.16■□□□□ 0.18
VPS52-212ENST00000445902 GJB4Q9NTQ9 266 aa16.16■□□□□ 0.18
VPS52-212ENST00000445902 LAMA4Q16363 1823 aa16.16■□□□□ 0.18
VPS52-212ENST00000445902 VWA3AA6NCI4 1184 aa16.15■□□□□ 0.18
VPS52-212ENST00000445902 NEDD4P46934 1319 aa16.15■□□□□ 0.18
VPS52-212ENST00000445902 PRAMEF22A3QJZ6 481 aa16.15■□□□□ 0.18
VPS52-212ENST00000445902 CASQ1P31415 396 aa16.15■□□□□ 0.18
VPS52-212ENST00000445902 RAB11FIP4Q86YS3 637 aa16.15■□□□□ 0.18
VPS52-212ENST00000445902 USPL1Q5W0Q7 1092 aa16.14■□□□□ 0.17
VPS52-212ENST00000445902 ADALQ6DHV7 355 aa16.14■□□□□ 0.17
VPS52-212ENST00000445902 DDX46Q7L014 1031 aaKnown RBP16.14■□□□□ 0.17
VPS52-212ENST00000445902 PDILTQ8N807 584 aa16.14■□□□□ 0.17
VPS52-212ENST00000445902 SRRTQ9BXP5 876 aaKnown RBP16.14■□□□□ 0.17
VPS52-212ENST00000445902 FUT8Q9BYC5 575 aa16.14■□□□□ 0.17
VPS52-212ENST00000445902 PPP2R2CQ9Y2T4 447 aa16.14■□□□□ 0.17
VPS52-212ENST00000445902 RRP15Q9Y3B9 282 aaKnown RBP16.14■□□□□ 0.17
VPS52-212ENST00000445902 NLRP6P59044 892 aa16.14■□□□□ 0.17
VPS52-212ENST00000445902 NLRP12P59046 1061 aa16.14■□□□□ 0.17
VPS52-212ENST00000445902 MCM6Q14566 821 aa16.14■□□□□ 0.17
VPS52-212ENST00000445902 NGDNQ8NEJ9 315 aaKnown RBP16.14■□□□□ 0.17
VPS52-212ENST00000445902 AK7Q96M32 723 aa16.14■□□□□ 0.17
VPS52-212ENST00000445902 ZNF609O15014 1411 aa16.14■□□□□ 0.17
VPS52-212ENST00000445902 ZNF202O95125 648 aa16.14■□□□□ 0.17
VPS52-212ENST00000445902 KCNJ6P48051 423 aa16.14■□□□□ 0.17
VPS52-212ENST00000445902 CHMP4CQ96CF2 233 aa16.14■□□□□ 0.17
VPS52-212ENST00000445902 HSD3B7Q9H2F3 369 aa16.14■□□□□ 0.17
VPS52-212ENST00000445902 VPS18Q9P253 973 aa16.14■□□□□ 0.17
VPS52-212ENST00000445902 CCP110O43303 1012 aa16.13■□□□□ 0.17
VPS52-212ENST00000445902 KARSQ15046 597 aaKnown RBP16.13■□□□□ 0.17
VPS52-212ENST00000445902 FOXR1Q6PIV2 292 aa16.13■□□□□ 0.17
VPS52-212ENST00000445902 SRLQ86TD4 932 aa16.13■□□□□ 0.17
VPS52-212ENST00000445902 CWC15Q9P013 229 aaKnown RBP16.13■□□□□ 0.17
VPS52-212ENST00000445902 PLEKHG3A1L390 1219 aa16.13■□□□□ 0.17
VPS52-212ENST00000445902 ANKRD65E5RJM6 399 aa16.13■□□□□ 0.17
VPS52-212ENST00000445902 TPM1P09493 284 aa16.13■□□□□ 0.17
VPS52-212ENST00000445902 GPR161Q8N6U8 529 aaKnown RBP16.13■□□□□ 0.17
VPS52-212ENST00000445902 DHX58Q96C10 678 aa16.13■□□□□ 0.17
VPS52-212ENST00000445902 LLPHQ9BRT6 129 aaKnown RBP16.13■□□□□ 0.17
VPS52-212ENST00000445902 DESI2Q9BSY9 194 aa16.13■□□□□ 0.17
VPS52-212ENST00000445902 GPHNQ9NQX3 736 aaPredicted RBP16.13■□□□□ 0.17
VPS52-212ENST00000445902 RICTORQ6R327 1708 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms