RNA–Protein interactions for RNA: ENST00000444376.7

HNRNPU-205, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-205ENST00000444376 RTL9Q8NET4 1388 aa18.58■□□□□ 0.57
HNRNPU-205ENST00000444376 MPHOSPH6Q99547 160 aaKnown RBP18.58■□□□□ 0.56
HNRNPU-205ENST00000444376 TMEM110-MUSTN1A8MSY1 372 aa18.58■□□□□ 0.56
HNRNPU-205ENST00000444376 FBLN1P23142 703 aa18.58■□□□□ 0.56
HNRNPU-205ENST00000444376 RFC4P35249 363 aa18.58■□□□□ 0.56
HNRNPU-205ENST00000444376 SPATA24Q86W54 205 aa18.58■□□□□ 0.56
HNRNPU-205ENST00000444376 C8orf58Q8NAV2 365 aa18.58■□□□□ 0.56
HNRNPU-205ENST00000444376 IQCGQ9H095 443 aaKnown RBP18.58■□□□□ 0.56
HNRNPU-205ENST00000444376 PPM1FP49593 454 aaPredicted RBP18.57■□□□□ 0.56
HNRNPU-205ENST00000444376 MSL1Q68DK7 614 aa18.57■□□□□ 0.56
HNRNPU-205ENST00000444376 AK2P54819 239 aa18.57■□□□□ 0.56
HNRNPU-205ENST00000444376 SERPINA10Q9UK55 444 aa18.57■□□□□ 0.56
HNRNPU-205ENST00000444376 IL15P40933 162 aaPredicted RBP18.57■□□□□ 0.56
HNRNPU-205ENST00000444376 MXRA7P84157 204 aa18.57■□□□□ 0.56
HNRNPU-205ENST00000444376 UBXN1Q04323 297 aa18.57■□□□□ 0.56
HNRNPU-205ENST00000444376 COPS6Q7L5N1 327 aa18.57■□□□□ 0.56
HNRNPU-205ENST00000444376 CAPZA3Q96KX2 299 aa18.57■□□□□ 0.56
HNRNPU-205ENST00000444376 TTC41PQ6P2S7 1318 aa18.57■□□□□ 0.56
HNRNPU-205ENST00000444376 KRT86O43790 486 aa18.57■□□□□ 0.56
HNRNPU-205ENST00000444376 SLC9C2Q5TAH2 1124 aa18.57■□□□□ 0.56
HNRNPU-205ENST00000444376 MAGEB6P1A0A0J9YX57 407 aa18.57■□□□□ 0.56
HNRNPU-205ENST00000444376 LMOD1P29536 600 aaPredicted RBP18.57■□□□□ 0.56
HNRNPU-205ENST00000444376 PABPN1LA6NDY0 278 aaKnown RBP18.56■□□□□ 0.56
HNRNPU-205ENST00000444376 PHACTR2O75167 634 aa18.56■□□□□ 0.56
HNRNPU-205ENST00000444376 NBPF6Q5VWK0 638 aa18.56■□□□□ 0.56
HNRNPU-205ENST00000444376 NBPF5PQ86XG9 351 aaPredicted RBP18.56■□□□□ 0.56
HNRNPU-205ENST00000444376 NBPF4Q96M43 638 aa18.56■□□□□ 0.56
HNRNPU-205ENST00000444376 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.56■□□□□ 0.56
HNRNPU-205ENST00000444376 V9GYY5 206 aaPredicted RBP18.56■□□□□ 0.56
HNRNPU-205ENST00000444376 KIF5AQ12840 1032 aa18.56■□□□□ 0.56
HNRNPU-205ENST00000444376 NAA16Q6N069 864 aaPredicted RBP18.56■□□□□ 0.56
HNRNPU-205ENST00000444376 KSR2Q6VAB6 950 aa18.56■□□□□ 0.56
HNRNPU-205ENST00000444376 ATRIPQ8WXE1 791 aa18.56■□□□□ 0.56
HNRNPU-205ENST00000444376 CCDC77Q9BR77 488 aa18.56■□□□□ 0.56
HNRNPU-205ENST00000444376 TRIM75PA6NK02 468 aa18.56■□□□□ 0.56
HNRNPU-205ENST00000444376 BICDL2A1A5D9 508 aa18.56■□□□□ 0.56
HNRNPU-205ENST00000444376 GSTA5Q7RTV2 222 aa18.56■□□□□ 0.56
HNRNPU-205ENST00000444376 ZNF622Q969S3 477 aaKnown RBP eCLIP18.56■□□□□ 0.562e-18■■□□□ 13.2
HNRNPU-205ENST00000444376 SELENOSQ9BQE4 189 aa18.56■□□□□ 0.56
HNRNPU-205ENST00000444376 CALM1P0DP23 149 aa18.55■□□□□ 0.56
HNRNPU-205ENST00000444376 CALM2P0DP24 149 aa18.55■□□□□ 0.56
HNRNPU-205ENST00000444376 CALM3P0DP25 149 aa18.55■□□□□ 0.56
HNRNPU-205ENST00000444376 ARID5AQ03989 594 aa18.55■□□□□ 0.56
HNRNPU-205ENST00000444376 APOBRQ0VD83 1088 aa18.55■□□□□ 0.56
HNRNPU-205ENST00000444376 KARSQ15046 597 aaKnown RBP18.55■□□□□ 0.56
HNRNPU-205ENST00000444376 CCDC6Q16204 474 aa18.55■□□□□ 0.56
HNRNPU-205ENST00000444376 CREB3L3Q68CJ9 461 aa18.55■□□□□ 0.56
HNRNPU-205ENST00000444376 ANKS4BQ8N8V4 417 aa18.55■□□□□ 0.56
HNRNPU-205ENST00000444376 RUFY3Q7L099 469 aa18.55■□□□□ 0.56
HNRNPU-205ENST00000444376 C6orf50Q9HD87 102 aa18.55■□□□□ 0.56
HNRNPU-205ENST00000444376 LMBR1LQ6UX01 489 aa18.55■□□□□ 0.56
HNRNPU-205ENST00000444376 RNF113AO15541 343 aaKnown RBP18.55■□□□□ 0.56
HNRNPU-205ENST00000444376 GRIPAP1Q4V328 841 aa18.55■□□□□ 0.56
HNRNPU-205ENST00000444376 IQSEC3Q9UPP2 1182 aaPredicted RBP18.55■□□□□ 0.56
HNRNPU-205ENST00000444376 PA2G4Q9UQ80 394 aaKnown RBP18.55■□□□□ 0.56
HNRNPU-205ENST00000444376 PPIP5K1Q6PFW1 1433 aa18.54■□□□□ 0.56
HNRNPU-205ENST00000444376 SMC5Q8IY18 1101 aa18.54■□□□□ 0.56
HNRNPU-205ENST00000444376 ZNF569Q5MCW4 686 aa18.54■□□□□ 0.56
HNRNPU-205ENST00000444376 NEK11Q8NG66 645 aa18.54■□□□□ 0.56
HNRNPU-205ENST00000444376 TRAF1Q13077 416 aa18.54■□□□□ 0.56
HNRNPU-205ENST00000444376 CHST3Q7LGC8 479 aa18.54■□□□□ 0.56
HNRNPU-205ENST00000444376 SMARCC2Q8TAQ2 1214 aa18.54■□□□□ 0.56
HNRNPU-205ENST00000444376 IFNKQ9P0W0 207 aa18.54■□□□□ 0.56
HNRNPU-205ENST00000444376 VPS18Q9P253 973 aa18.54■□□□□ 0.56
HNRNPU-205ENST00000444376 GUCA1BQ9UMX6 200 aa18.54■□□□□ 0.56
HNRNPU-205ENST00000444376 GJC1P36383 396 aa18.53■□□□□ 0.56
HNRNPU-205ENST00000444376 LRRC45Q96CN5 670 aa18.53■□□□□ 0.56
HNRNPU-205ENST00000444376 GNAT2P19087 354 aa18.53■□□□□ 0.56
HNRNPU-205ENST00000444376 GTF2A1P52655 376 aaPredicted RBP18.53■□□□□ 0.56
HNRNPU-205ENST00000444376 PICALMQ13492 652 aa18.53■□□□□ 0.56
HNRNPU-205ENST00000444376 AKAP4Q5JQC9 854 aa18.53■□□□□ 0.56
HNRNPU-205ENST00000444376 RRP36Q96EU6 259 aaKnown RBP18.53■□□□□ 0.56
HNRNPU-205ENST00000444376 CCDC42Q96M95 316 aa18.53■□□□□ 0.56
HNRNPU-205ENST00000444376 SBNO2Q9Y2G9 1366 aa18.53■□□□□ 0.56
HNRNPU-205ENST00000444376 TUBB4BP68371 445 aa18.53■□□□□ 0.56
HNRNPU-205ENST00000444376 CEP85Q6P2H3 762 aa18.53■□□□□ 0.56
HNRNPU-205ENST00000444376 TMEM87AQ8NBN3 555 aa18.53■□□□□ 0.56
HNRNPU-205ENST00000444376 CAPN2P17655 700 aa18.53■□□□□ 0.56
HNRNPU-205ENST00000444376 CHRNA2Q15822 529 aa18.53■□□□□ 0.56
HNRNPU-205ENST00000444376 LZTFL1Q9NQ48 299 aa18.53■□□□□ 0.56
HNRNPU-205ENST00000444376 TERF1P54274 439 aa18.52■□□□□ 0.56
HNRNPU-205ENST00000444376 STX17P56962 302 aa18.52■□□□□ 0.56
HNRNPU-205ENST00000444376 CCDC121Q6ZUS5 278 aa18.52■□□□□ 0.56
HNRNPU-205ENST00000444376 NGLY1Q96IV0 654 aa18.52■□□□□ 0.56
HNRNPU-205ENST00000444376 SYT10Q6XYQ8 523 aa18.52■□□□□ 0.56
HNRNPU-205ENST00000444376 UTP14AQ9BVJ6 771 aaKnown RBP18.52■□□□□ 0.56
HNRNPU-205ENST00000444376 SSX2IPQ9Y2D8 614 aa18.52■□□□□ 0.56
HNRNPU-205ENST00000444376 PTPDC1A2A3K4 754 aa18.52■□□□□ 0.56
HNRNPU-205ENST00000444376 MCM7P33993 719 aa18.52■□□□□ 0.56
HNRNPU-205ENST00000444376 CALML3P27482 149 aa18.52■□□□□ 0.56
HNRNPU-205ENST00000444376 SLC39A6Q13433 755 aa18.52■□□□□ 0.55
HNRNPU-205ENST00000444376 HS1BP3Q53T59 392 aa18.52■□□□□ 0.55
HNRNPU-205ENST00000444376 CCDC50Q8IVM0 306 aa18.52■□□□□ 0.55
HNRNPU-205ENST00000444376 ZCRB1Q8TBF4 217 aaKnown RBP18.52■□□□□ 0.55
HNRNPU-205ENST00000444376 EEF2P13639 858 aaKnown RBP18.52■□□□□ 0.55
HNRNPU-205ENST00000444376 BRAPQ7Z569 592 aa18.51■□□□□ 0.55
HNRNPU-205ENST00000444376 MICALL1Q8N3F8 863 aa18.51■□□□□ 0.55
HNRNPU-205ENST00000444376 TTC14Q96N46 770 aa18.51■□□□□ 0.55
HNRNPU-205ENST00000444376 F8W031 263 aaPredicted RBP18.51■□□□□ 0.55
HNRNPU-205ENST00000444376 NBPF11Q86T75 865 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms